RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 VASPP50552 380 aaPredicted RBP3.67□□□□□ -1.82
TCOF1-208ENST00000506063 MLLT10P55197 1068 aa3.67□□□□□ -1.82
TCOF1-208ENST00000506063 GRIN1Q05586 938 aa3.67□□□□□ -1.82
TCOF1-208ENST00000506063 BFSP1Q12934 665 aa3.67□□□□□ -1.82
TCOF1-208ENST00000506063 KCNAB2Q13303 367 aa3.67□□□□□ -1.82
TCOF1-208ENST00000506063 GPR17Q13304 367 aa3.67□□□□□ -1.82
TCOF1-208ENST00000506063 PLD1Q13393 1074 aa3.67□□□□□ -1.82
TCOF1-208ENST00000506063 PCBP1Q15365 356 aaKnown RBP eCLIP3.67□□□□□ -1.82
TCOF1-208ENST00000506063 INAVAQ3KP66 663 aa3.67□□□□□ -1.82
TCOF1-208ENST00000506063 XKR4Q5GH76 650 aa3.67□□□□□ -1.82
TCOF1-208ENST00000506063 XKR3Q5GH77 459 aa3.67□□□□□ -1.82
TCOF1-208ENST00000506063 EGFLAMQ63HQ2 1017 aa3.67□□□□□ -1.82
TCOF1-208ENST00000506063 ZNF280DQ6N043 979 aa3.67□□□□□ -1.82
TCOF1-208ENST00000506063 CC2D1AQ6P1N0 951 aaPredicted RBP3.67□□□□□ -1.82
TCOF1-208ENST00000506063 MON1AQ86VX9 555 aa3.67□□□□□ -1.82
TCOF1-208ENST00000506063 XYLT1Q86Y38 959 aa3.67□□□□□ -1.82
TCOF1-208ENST00000506063 ITPRIPQ8IWB1 547 aa3.67□□□□□ -1.82
TCOF1-208ENST00000506063 SRBD1Q8N5C6 995 aaKnown RBP3.67□□□□□ -1.82
TCOF1-208ENST00000506063 EID2Q8N6I1 236 aa3.67□□□□□ -1.82
TCOF1-208ENST00000506063 SPATA3Q8NHX4 192 aa3.67□□□□□ -1.82
TCOF1-208ENST00000506063 LRRC15Q8TF66 581 aa3.67□□□□□ -1.82
TCOF1-208ENST00000506063 PSPC1Q8WXF1 523 aaKnown RBP3.67□□□□□ -1.82
TCOF1-208ENST00000506063 DDX12PQ92771 950 aa3.67□□□□□ -1.82
TCOF1-208ENST00000506063 GJA10Q969M2 543 aa3.67□□□□□ -1.82
TCOF1-208ENST00000506063 MARVELD3Q96A59 401 aa3.67□□□□□ -1.82
TCOF1-208ENST00000506063 CCDC97Q96F63 343 aaPredicted RBP3.67□□□□□ -1.82
TCOF1-208ENST00000506063 TMEM87BQ96K49 555 aa3.67□□□□□ -1.82
TCOF1-208ENST00000506063 SUSD3Q96L08 255 aa3.67□□□□□ -1.82
TCOF1-208ENST00000506063 MTMR9Q96QG7 549 aa3.67□□□□□ -1.82
TCOF1-208ENST00000506063 CYP2S1Q96SQ9 504 aa3.67□□□□□ -1.82
TCOF1-208ENST00000506063 PNKPQ96T60 521 aa3.67□□□□□ -1.82
TCOF1-208ENST00000506063 ZNF577Q9BSK1 485 aa3.67□□□□□ -1.82
TCOF1-208ENST00000506063 MKRN2Q9H000 416 aaKnown RBP3.67□□□□□ -1.82
TCOF1-208ENST00000506063 UNC45AQ9H3U1 944 aa3.67□□□□□ -1.82
TCOF1-208ENST00000506063 XPNPEP1Q9NQW7 623 aa3.67□□□□□ -1.82
TCOF1-208ENST00000506063 ITM2CQ9NQX7 267 aa3.67□□□□□ -1.82
TCOF1-208ENST00000506063 GCNT4Q9P109 453 aa3.67□□□□□ -1.82
TCOF1-208ENST00000506063 WRAP73Q9P2S5 460 aaPredicted RBP3.67□□□□□ -1.82
TCOF1-208ENST00000506063 ZMYM5Q9UJ78 669 aa3.67□□□□□ -1.82
TCOF1-208ENST00000506063 ERRFI1Q9UJM3 462 aaPredicted RBP3.67□□□□□ -1.82
TCOF1-208ENST00000506063 TUBD1Q9UJT1 453 aa3.67□□□□□ -1.82
TCOF1-208ENST00000506063 ACSL6Q9UKU0 697 aa3.67□□□□□ -1.82
TCOF1-208ENST00000506063 PCDHGA8Q9Y5G5 932 aa3.67□□□□□ -1.82
TCOF1-208ENST00000506063 RAD54BQ9Y620 910 aa3.67□□□□□ -1.82
TCOF1-208ENST00000506063 PRRC2AP48634 2157 aaKnown RBP3.67□□□□□ -1.82
TCOF1-208ENST00000506063 TCHHQ07283 1943 aa3.67□□□□□ -1.82
TCOF1-208ENST00000506063 UNC13CQ8NB66 2214 aa3.67□□□□□ -1.82
TCOF1-208ENST00000506063 MN1Q10571 1320 aaPredicted RBP3.67□□□□□ -1.82
TCOF1-208ENST00000506063 LY6G6EA0A0G2JKS1 128 aa3.66□□□□□ -1.82
TCOF1-208ENST00000506063 hCG_1642624A0A1W2PR95 340 aa3.66□□□□□ -1.82
TCOF1-208ENST00000506063 TRIM24O15164 1050 aa3.66□□□□□ -1.82
TCOF1-208ENST00000506063 OPA1O60313 960 aa3.66□□□□□ -1.82
TCOF1-208ENST00000506063 MARCH6O60337 910 aa3.66□□□□□ -1.82
TCOF1-208ENST00000506063 SYNCRIPO60506 623 aaKnown RBP3.66□□□□□ -1.82
TCOF1-208ENST00000506063 FAM155BO75949 473 aa3.66□□□□□ -1.82
TCOF1-208ENST00000506063 NFATC1O95644 943 aa3.66□□□□□ -1.82
TCOF1-208ENST00000506063 APODP05090 189 aa3.66□□□□□ -1.82
TCOF1-208ENST00000506063 C7P10643 843 aa3.66□□□□□ -1.82
TCOF1-208ENST00000506063 RARGP13631 454 aa3.66□□□□□ -1.82
TCOF1-208ENST00000506063 CPB1P15086 417 aa3.66□□□□□ -1.82
TCOF1-208ENST00000506063 DDX6P26196 483 aaKnown RBP eCLIP3.66□□□□□ -1.82
TCOF1-208ENST00000506063 EPHA8P29322 1005 aaPredicted RBP3.66□□□□□ -1.82
TCOF1-208ENST00000506063 NTSR1P30989 418 aa3.66□□□□□ -1.82
TCOF1-208ENST00000506063 GRIA2P42262 883 aa3.66□□□□□ -1.82
TCOF1-208ENST00000506063 ALDH1A3P47895 512 aa3.66□□□□□ -1.82
TCOF1-208ENST00000506063 IFNAR2P48551 515 aa3.66□□□□□ -1.82
TCOF1-208ENST00000506063 TPMTP51580 245 aa3.66□□□□□ -1.82
TCOF1-208ENST00000506063 PDX1P52945 283 aa3.66□□□□□ -1.82
TCOF1-208ENST00000506063 FOSBP53539 338 aa3.66□□□□□ -1.82
TCOF1-208ENST00000506063 POLE2P56282 527 aa3.66□□□□□ -1.82
TCOF1-208ENST00000506063 E2F1Q01094 437 aa3.66□□□□□ -1.82
TCOF1-208ENST00000506063 KDSRQ06136 332 aa3.66□□□□□ -1.82
TCOF1-208ENST00000506063 POU5F1BQ06416 359 aa3.66□□□□□ -1.82
TCOF1-208ENST00000506063 BNIP3Q12983 259 aa3.66□□□□□ -1.82
TCOF1-208ENST00000506063 CAPSQ13938 189 aa3.66□□□□□ -1.82
TCOF1-208ENST00000506063 DHCR24Q15392 516 aa3.66□□□□□ -1.82
TCOF1-208ENST00000506063 ISXQ2M1V0 245 aa3.66□□□□□ -1.82
TCOF1-208ENST00000506063 SGO2Q562F6 1265 aa3.66□□□□□ -1.82
TCOF1-208ENST00000506063 C3orf38Q5JPI3 329 aa3.66□□□□□ -1.82
TCOF1-208ENST00000506063 PPP1R26Q5T8A7 1209 aaPredicted RBP3.66□□□□□ -1.82
TCOF1-208ENST00000506063 ZKSCAN2Q63HK3 967 aa3.66□□□□□ -1.82
TCOF1-208ENST00000506063 RHBDF2Q6PJF5 856 aa3.66□□□□□ -1.82
TCOF1-208ENST00000506063 ALKAL1Q6UXT8 129 aa3.66□□□□□ -1.82
TCOF1-208ENST00000506063 TIPARPQ7Z3E1 657 aaKnown RBP3.66□□□□□ -1.82
TCOF1-208ENST00000506063 ATCAYQ86WG3 371 aa3.66□□□□□ -1.82
TCOF1-208ENST00000506063 HACE1Q8IYU2 909 aa3.66□□□□□ -1.82
TCOF1-208ENST00000506063 ADGRG2Q8IZP9 1017 aa3.66□□□□□ -1.82
TCOF1-208ENST00000506063 SLC34A3Q8N130 599 aa3.66□□□□□ -1.82
TCOF1-208ENST00000506063 GALNT11Q8NCW6 608 aa3.66□□□□□ -1.82
TCOF1-208ENST00000506063 STKLD1Q8NE28 680 aa3.66□□□□□ -1.82
TCOF1-208ENST00000506063 KCNV2Q8TDN2 545 aa3.66□□□□□ -1.82
TCOF1-208ENST00000506063 ASAP3Q8TDY4 903 aa3.66□□□□□ -1.82
TCOF1-208ENST00000506063 SH3RF2Q8TEC5 729 aa3.66□□□□□ -1.82
TCOF1-208ENST00000506063 RRP36Q96EU6 259 aaKnown RBP3.66□□□□□ -1.82
TCOF1-208ENST00000506063 P2RY11Q96G91 374 aa3.66□□□□□ -1.82
TCOF1-208ENST00000506063 LURAP1Q96LR2 239 aa3.66□□□□□ -1.82
TCOF1-208ENST00000506063 UROC1Q96N76 676 aa3.66□□□□□ -1.82
TCOF1-208ENST00000506063 ZMAT2Q96NC0 199 aaKnown RBP3.66□□□□□ -1.82
TCOF1-208ENST00000506063 ELF4Q99607 663 aaPredicted RBP3.66□□□□□ -1.82
TCOF1-208ENST00000506063 SLC12A9Q9BXP2 914 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms