RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 ZDHHC9Q9Y397 364 aa4.44□□□□□ -1.7
TRAPPC13-208ENST00000505553 DTNAQ9Y4J8 743 aa4.44□□□□□ -1.7
TRAPPC13-208ENST00000505553 HS3ST4Q9Y661 456 aa4.44□□□□□ -1.7
TRAPPC13-208ENST00000505553 TISP43B9A030 160 aa4.43□□□□□ -1.7
TRAPPC13-208ENST00000505553 NPIPB8E9PQR5 432 aa4.43□□□□□ -1.7
TRAPPC13-208ENST00000505553 SLC6A4P31645 630 aa4.43□□□□□ -1.7
TRAPPC13-208ENST00000505553 POU5F1Q01860 360 aaKnown RBP4.43□□□□□ -1.7
TRAPPC13-208ENST00000505553 NUCB1Q02818 461 aa4.43□□□□□ -1.7
TRAPPC13-208ENST00000505553 MRPL49Q13405 166 aaKnown RBP4.43□□□□□ -1.7
TRAPPC13-208ENST00000505553 SPDYAQ5MJ70 313 aa4.43□□□□□ -1.7
TRAPPC13-208ENST00000505553 TMTC4Q5T4D3 741 aa4.43□□□□□ -1.7
TRAPPC13-208ENST00000505553 RAP1GAP2Q684P5 730 aa4.43□□□□□ -1.7
TRAPPC13-208ENST00000505553 ITPRIPL1Q6GPH6 555 aa4.43□□□□□ -1.7
TRAPPC13-208ENST00000505553 UBE3BQ7Z3V4 1068 aa4.43□□□□□ -1.7
TRAPPC13-208ENST00000505553 HEATR4Q86WZ0 1026 aa4.43□□□□□ -1.7
TRAPPC13-208ENST00000505553 GAS2L3Q86XJ1 694 aa4.43□□□□□ -1.7
TRAPPC13-208ENST00000505553 CPOQ8IVL8 374 aa4.43□□□□□ -1.7
TRAPPC13-208ENST00000505553 CCDC28AQ8IWP9 274 aa4.43□□□□□ -1.7
TRAPPC13-208ENST00000505553 KBTBD2Q8IY47 623 aa4.43□□□□□ -1.7
TRAPPC13-208ENST00000505553 NRSN1Q8IZ57 195 aa4.43□□□□□ -1.7
TRAPPC13-208ENST00000505553 HTRA1Q92743 480 aa4.43□□□□□ -1.7
TRAPPC13-208ENST00000505553 RILPL2Q969X0 211 aa4.43□□□□□ -1.7
TRAPPC13-208ENST00000505553 RPL10LQ96L21 214 aaKnown RBP4.43□□□□□ -1.7
TRAPPC13-208ENST00000505553 NELL2Q99435 816 aa4.43□□□□□ -1.7
TRAPPC13-208ENST00000505553 KIAA1683Q9H0B3 1180 aa4.43□□□□□ -1.7
TRAPPC13-208ENST00000505553 ENKD1Q9H0I2 346 aa4.43□□□□□ -1.7
TRAPPC13-208ENST00000505553 GSTO2Q9H4Y5 243 aa4.43□□□□□ -1.7
TRAPPC13-208ENST00000505553 PLEKHA5Q9HAU0 1116 aa4.43□□□□□ -1.7
TRAPPC13-208ENST00000505553 PRDM8Q9NQV8 689 aa4.43□□□□□ -1.7
TRAPPC13-208ENST00000505553 OLA1Q9NTK5 396 aaKnown RBP4.43□□□□□ -1.7
TRAPPC13-208ENST00000505553 TTLL3Q9Y4R7 772 aa4.43□□□□□ -1.7
TRAPPC13-208ENST00000505553 A6NCN8 305 aa4.42□□□□□ -1.7
TRAPPC13-208ENST00000505553 B4GALT4O60513 344 aa4.42□□□□□ -1.7
TRAPPC13-208ENST00000505553 CCNT2O60583 730 aaKnown RBP4.42□□□□□ -1.7
TRAPPC13-208ENST00000505553 USP1O94782 785 aa4.42□□□□□ -1.7
TRAPPC13-208ENST00000505553 NTSR2O95665 410 aa4.42□□□□□ -1.7
TRAPPC13-208ENST00000505553 TK1P04183 234 aa4.42□□□□□ -1.7
TRAPPC13-208ENST00000505553 PRKCBP05771 671 aa4.42□□□□□ -1.7
TRAPPC13-208ENST00000505553 CKBP12277 381 aa4.42□□□□□ -1.7
TRAPPC13-208ENST00000505553 LMO1P25800 156 aa4.42□□□□□ -1.7
TRAPPC13-208ENST00000505553 SLC5A2P31639 672 aa4.42□□□□□ -1.7
TRAPPC13-208ENST00000505553 ATICP31939 592 aa4.42□□□□□ -1.7
TRAPPC13-208ENST00000505553 TUBP50607 506 aa4.42□□□□□ -1.7
TRAPPC13-208ENST00000505553 BCAT1P54687 386 aa4.42□□□□□ -1.7
TRAPPC13-208ENST00000505553 RRADP55042 308 aa4.42□□□□□ -1.7
TRAPPC13-208ENST00000505553 DPTQ07507 201 aa4.42□□□□□ -1.7
TRAPPC13-208ENST00000505553 SCAPQ12770 1279 aa4.42□□□□□ -1.7
TRAPPC13-208ENST00000505553 TCF15Q12870 199 aa4.42□□□□□ -1.7
TRAPPC13-208ENST00000505553 DUSP8Q13202 625 aa4.42□□□□□ -1.7
TRAPPC13-208ENST00000505553 CUL4BQ13620 913 aa4.42□□□□□ -1.7
TRAPPC13-208ENST00000505553 SLC12A1Q13621 1099 aa4.42□□□□□ -1.7
TRAPPC13-208ENST00000505553 UBXN2BQ14CS0 331 aa4.42□□□□□ -1.7
TRAPPC13-208ENST00000505553 DLGAP5Q15398 846 aa4.42□□□□□ -1.7
TRAPPC13-208ENST00000505553 NPY5RQ15761 445 aa4.42□□□□□ -1.7
TRAPPC13-208ENST00000505553 NBPF8Q3BBV2 869 aa4.42□□□□□ -1.7
TRAPPC13-208ENST00000505553 ZNF568Q3ZCX4 644 aa4.42□□□□□ -1.7
TRAPPC13-208ENST00000505553 PLA1AQ53H76 456 aa4.42□□□□□ -1.7
TRAPPC13-208ENST00000505553 ZDHHC24Q6UX98 284 aa4.42□□□□□ -1.7
TRAPPC13-208ENST00000505553 RAB11FIP2Q7L804 512 aa4.42□□□□□ -1.7
TRAPPC13-208ENST00000505553 FASTKD5Q7L8L6 764 aaKnown RBP4.42□□□□□ -1.7
TRAPPC13-208ENST00000505553 RASGRP3Q8IV61 690 aa4.42□□□□□ -1.7
TRAPPC13-208ENST00000505553 KLHL36Q8N4N3 616 aa4.42□□□□□ -1.7
TRAPPC13-208ENST00000505553 TMEM57Q8N5G2 664 aa4.42□□□□□ -1.7
TRAPPC13-208ENST00000505553 FITM2Q8N6M3 262 aa4.42□□□□□ -1.7
TRAPPC13-208ENST00000505553 AMER2Q8N7J2 671 aa4.42□□□□□ -1.7
TRAPPC13-208ENST00000505553 FAM46DQ8NEK8 389 aa4.42□□□□□ -1.7
TRAPPC13-208ENST00000505553 NUP133Q8WUM0 1156 aa4.42□□□□□ -1.7
TRAPPC13-208ENST00000505553 RFFLQ8WZ73 363 aa4.42□□□□□ -1.7
TRAPPC13-208ENST00000505553 CENPIQ92674 756 aaPredicted RBP4.42□□□□□ -1.7
TRAPPC13-208ENST00000505553 RABGGTAQ92696 567 aa4.42□□□□□ -1.7
TRAPPC13-208ENST00000505553 HVCN1Q96D96 273 aa4.42□□□□□ -1.7
TRAPPC13-208ENST00000505553 COG8Q96MW5 612 aa4.42□□□□□ -1.7
TRAPPC13-208ENST00000505553 TRAPPC9Q96Q05 1148 aa4.42□□□□□ -1.7
TRAPPC13-208ENST00000505553 EPC1Q9H2F5 836 aa4.42□□□□□ -1.7
TRAPPC13-208ENST00000505553 NOD2Q9HC29 1040 aa4.42□□□□□ -1.7
TRAPPC13-208ENST00000505553 PREBQ9HCU5 417 aa4.42□□□□□ -1.7
TRAPPC13-208ENST00000505553 IL23AQ9NPF7 189 aa4.42□□□□□ -1.7
TRAPPC13-208ENST00000505553 DKK4Q9UBT3 224 aa4.42□□□□□ -1.7
TRAPPC13-208ENST00000505553 SLC45A2Q9UMX9 530 aa4.42□□□□□ -1.7
TRAPPC13-208ENST00000505553 A0A087X0M5 115 aa4.41□□□□□ -1.7
TRAPPC13-208ENST00000505553 A0A1B0GX30 115 aa4.41□□□□□ -1.7
TRAPPC13-208ENST00000505553 PMS2P1A4D2B8 440 aa4.41□□□□□ -1.7
TRAPPC13-208ENST00000505553 TBKBP1A7MCY6 615 aa4.41□□□□□ -1.7
TRAPPC13-208ENST00000505553 H7C4K7 107 aa4.41□□□□□ -1.7
TRAPPC13-208ENST00000505553 DNPH1O43598 174 aa4.41□□□□□ -1.7
TRAPPC13-208ENST00000505553 AGFG2O95081 481 aa4.41□□□□□ -1.7
TRAPPC13-208ENST00000505553 TBX18O95935 607 aa4.41□□□□□ -1.7
TRAPPC13-208ENST00000505553 ATP1A3P13637 1013 aa4.41□□□□□ -1.7
TRAPPC13-208ENST00000505553 GYS1P13807 737 aa4.41□□□□□ -1.7
TRAPPC13-208ENST00000505553 PECAM1P16284 738 aaPredicted RBP4.41□□□□□ -1.7
TRAPPC13-208ENST00000505553 RPS6KB1P23443 525 aa4.41□□□□□ -1.7
TRAPPC13-208ENST00000505553 PTDSS1P48651 473 aaKnown RBP4.41□□□□□ -1.7
TRAPPC13-208ENST00000505553 PNLIPRP1P54315 467 aa4.41□□□□□ -1.7
TRAPPC13-208ENST00000505553 RAP2BP61225 183 aa4.41□□□□□ -1.7
TRAPPC13-208ENST00000505553 CHRNDQ07001 517 aa4.41□□□□□ -1.7
TRAPPC13-208ENST00000505553 R3HDM1Q15032 1099 aaKnown RBP4.41□□□□□ -1.7
TRAPPC13-208ENST00000505553 IQCB1Q15051 598 aa4.41□□□□□ -1.7
TRAPPC13-208ENST00000505553 MGAT5BQ3V5L5 792 aa4.41□□□□□ -1.7
TRAPPC13-208ENST00000505553 MAP3K21Q5TCX8 1036 aa4.41□□□□□ -1.7
TRAPPC13-208ENST00000505553 CCDC30Q5VVM6 783 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms