RNA–Protein interactions for RNA: ENST00000505526.1

PDCD6-203, Transcript of programmed cell death 6, humanhuman

TSL 1 (best)

Gene PDCD6, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-203ENST00000505526 TRPV4Q9HBA0 871 aa16.79■□□□□ 0.28
PDCD6-203ENST00000505526 CEP72Q9P209 647 aa16.79■□□□□ 0.28
PDCD6-203ENST00000505526 NUB1Q9Y5A7 615 aa16.79■□□□□ 0.28
PDCD6-203ENST00000505526 PMM2O15305 246 aa16.78■□□□□ 0.28
PDCD6-203ENST00000505526 VNN1O95497 513 aa16.78■□□□□ 0.28
PDCD6-203ENST00000505526 KRT19P08727 400 aa16.78■□□□□ 0.28
PDCD6-203ENST00000505526 CYP3A5P20815 502 aa16.78■□□□□ 0.28
PDCD6-203ENST00000505526 CNR2P34972 360 aa16.78■□□□□ 0.28
PDCD6-203ENST00000505526 PIK3CAP42336 1068 aa16.78■□□□□ 0.28
PDCD6-203ENST00000505526 ZNF75DP51815 510 aa16.78■□□□□ 0.28
PDCD6-203ENST00000505526 TWF1Q12792 350 aa16.78■□□□□ 0.28
PDCD6-203ENST00000505526 SRSF5Q13243 272 aaKnown RBP16.78■□□□□ 0.28
PDCD6-203ENST00000505526 GBP6Q6ZN66 633 aa16.78■□□□□ 0.28
PDCD6-203ENST00000505526 MFSD6LQ8IWD5 586 aa16.78■□□□□ 0.28
PDCD6-203ENST00000505526 LEMD2Q8NC56 503 aa16.78■□□□□ 0.28
PDCD6-203ENST00000505526 FBXL13Q8NEE6 735 aa16.78■□□□□ 0.28
PDCD6-203ENST00000505526 ASAH2Q9NR71 780 aa16.78■□□□□ 0.28
PDCD6-203ENST00000505526 GCNT4Q9P109 453 aa16.78■□□□□ 0.28
PDCD6-203ENST00000505526 SIX4Q9UIU6 781 aa16.78■□□□□ 0.28
PDCD6-203ENST00000505526 ITGA11Q9UKX5 1188 aa16.78■□□□□ 0.28
PDCD6-203ENST00000505526 GTPBP10A4D1E9 387 aaKnown RBP16.77■□□□□ 0.28
PDCD6-203ENST00000505526 HEPACAM2A8MVW5 462 aa16.77■□□□□ 0.28
PDCD6-203ENST00000505526 ARNTLO00327 626 aa16.77■□□□□ 0.28
PDCD6-203ENST00000505526 GDF9O60383 454 aa16.77■□□□□ 0.28
PDCD6-203ENST00000505526 CST3P01034 146 aaPredicted RBP16.77■□□□□ 0.28
PDCD6-203ENST00000505526 HLA-DRAP01903 254 aa16.77■□□□□ 0.28
PDCD6-203ENST00000505526 POLR2BP30876 1174 aaKnown RBP16.77■□□□□ 0.28
PDCD6-203ENST00000505526 RPL9P32969 192 aaKnown RBP16.77■□□□□ 0.28
PDCD6-203ENST00000505526 EPHA5P54756 1037 aa16.77■□□□□ 0.28
PDCD6-203ENST00000505526 MLLT6P55198 1093 aaPredicted RBP16.77■□□□□ 0.28
PDCD6-203ENST00000505526 TRPC3Q13507 836 aa16.77■□□□□ 0.28
PDCD6-203ENST00000505526 NCOA4Q13772 614 aa16.77■□□□□ 0.28
PDCD6-203ENST00000505526 LRRC32Q14392 662 aa16.77■□□□□ 0.28
PDCD6-203ENST00000505526 SYCP1Q15431 976 aa16.77■□□□□ 0.28
PDCD6-203ENST00000505526 EXOC3L4Q17RC7 722 aa16.77■□□□□ 0.28
PDCD6-203ENST00000505526 LONP2Q86WA8 852 aa16.77■□□□□ 0.28
PDCD6-203ENST00000505526 CXorf38Q8TB03 319 aa16.77■□□□□ 0.28
PDCD6-203ENST00000505526 CSGALNACT1Q8TDX6 532 aa16.77■□□□□ 0.28
PDCD6-203ENST00000505526 SEMA4DQ92854 862 aa16.77■□□□□ 0.28
PDCD6-203ENST00000505526 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.77■□□□□ 0.289e-7■■■■■ 53.5
PDCD6-203ENST00000505526 RAB20Q9NX57 234 aa16.77■□□□□ 0.28
PDCD6-203ENST00000505526 AFF4Q9UHB7 1163 aaKnown RBP16.77■□□□□ 0.28
PDCD6-203ENST00000505526 MAFFQ9ULX9 164 aa16.77■□□□□ 0.28
PDCD6-203ENST00000505526 COQ4Q9Y3A0 265 aa16.77■□□□□ 0.28
PDCD6-203ENST00000505526 NCANO14594 1321 aa16.77■□□□□ 0.27
PDCD6-203ENST00000505526 ZFHX4Q86UP3 3567 aa16.77■□□□□ 0.27
PDCD6-203ENST00000505526 ADCY5O95622 1261 aa16.76■□□□□ 0.27
PDCD6-203ENST00000505526 KCNMA1Q12791 1236 aa16.76■□□□□ 0.27
PDCD6-203ENST00000505526 TEAD2Q15562 447 aa16.76■□□□□ 0.27
PDCD6-203ENST00000505526 ZNF280DQ6N043 979 aa16.76■□□□□ 0.27
PDCD6-203ENST00000505526 YAF2Q8IY57 180 aa16.76■□□□□ 0.27
PDCD6-203ENST00000505526 E2F7Q96AV8 911 aa16.76■□□□□ 0.27
PDCD6-203ENST00000505526 MSANTD3Q96H12 275 aa16.76■□□□□ 0.27
PDCD6-203ENST00000505526 SUSD3Q96L08 255 aa16.76■□□□□ 0.27
PDCD6-203ENST00000505526 PCMTD1Q96MG8 357 aaPredicted RBP16.76■□□□□ 0.27
PDCD6-203ENST00000505526 ERGIC2Q96RQ1 377 aa16.76■□□□□ 0.27
PDCD6-203ENST00000505526 GPR88Q9GZN0 384 aa16.76■□□□□ 0.27
PDCD6-203ENST00000505526 INTS2Q9H0H0 1204 aaKnown RBP16.76■□□□□ 0.27
PDCD6-203ENST00000505526 SLITRK6Q9H5Y7 841 aa16.76■□□□□ 0.27
PDCD6-203ENST00000505526 RBM12Q9NTZ6 932 aaKnown RBP16.76■□□□□ 0.27
PDCD6-203ENST00000505526 AGAP1Q9UPQ3 857 aa16.76■□□□□ 0.27
PDCD6-203ENST00000505526 R3HCC1Q9Y3T6 440 aaKnown RBP16.76■□□□□ 0.27
PDCD6-203ENST00000505526 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.76■□□□□ 0.27
PDCD6-203ENST00000505526 USP24Q9UPU5 2620 aa16.76■□□□□ 0.27
PDCD6-203ENST00000505526 SLC38A8A6NNN8 435 aa16.75■□□□□ 0.27
PDCD6-203ENST00000505526 K7ESF4 209 aa16.75■□□□□ 0.27
PDCD6-203ENST00000505526 PPEF2O14830 753 aa16.75■□□□□ 0.27
PDCD6-203ENST00000505526 FOXD2O60548 495 aaPredicted RBP16.75■□□□□ 0.27
PDCD6-203ENST00000505526 CLSTN1O94985 981 aa16.75■□□□□ 0.27
PDCD6-203ENST00000505526 PAPSS2O95340 614 aaPredicted RBP16.75■□□□□ 0.27
PDCD6-203ENST00000505526 SLC9A1P19634 815 aa16.75■□□□□ 0.27
PDCD6-203ENST00000505526 KCNA4P22459 653 aa16.75■□□□□ 0.27
PDCD6-203ENST00000505526 PON1P27169 355 aa16.75■□□□□ 0.27
PDCD6-203ENST00000505526 LRPAP1P30533 357 aa16.75■□□□□ 0.27
PDCD6-203ENST00000505526 KLK7P49862 253 aa16.75■□□□□ 0.27
PDCD6-203ENST00000505526 KPNA1P52294 538 aaPredicted RBP16.75■□□□□ 0.27
PDCD6-203ENST00000505526 MYL6P60660 151 aa16.75■□□□□ 0.27
PDCD6-203ENST00000505526 RBP5P82980 135 aa16.75■□□□□ 0.27
PDCD6-203ENST00000505526 C9orf57Q5W0N0 161 aa16.75■□□□□ 0.27
PDCD6-203ENST00000505526 HEATR6Q6AI08 1181 aaKnown RBP16.75■□□□□ 0.27
PDCD6-203ENST00000505526 C1orf228Q6PIY5 440 aa16.75■□□□□ 0.27
PDCD6-203ENST00000505526 RNF19BQ6ZMZ0 732 aa16.75■□□□□ 0.27
PDCD6-203ENST00000505526 EHBP1Q8NDI1 1231 aa16.75■□□□□ 0.27
PDCD6-203ENST00000505526 LMO3Q8TAP4 145 aa16.75■□□□□ 0.27
PDCD6-203ENST00000505526 SHKBP1Q8TBC3 707 aa16.75■□□□□ 0.27
PDCD6-203ENST00000505526 ELMO3Q96BJ8 720 aa16.75■□□□□ 0.27
PDCD6-203ENST00000505526 PI4K2AQ9BTU6 479 aa16.75■□□□□ 0.27
PDCD6-203ENST00000505526 SIK3Q9Y2K2 1263 aa16.75■□□□□ 0.27
PDCD6-203ENST00000505526 A0A1W2PQC6 194 aa16.74■□□□□ 0.27
PDCD6-203ENST00000505526 ANO9A1A5B4 782 aa16.74■□□□□ 0.27
PDCD6-203ENST00000505526 PIRO00625 290 aa16.74■□□□□ 0.27
PDCD6-203ENST00000505526 CHADO15335 359 aa16.74■□□□□ 0.27
PDCD6-203ENST00000505526 CPB1P15086 417 aa16.74■□□□□ 0.27
PDCD6-203ENST00000505526 PBX1P40424 430 aa16.74■□□□□ 0.27
PDCD6-203ENST00000505526 SOX9P48436 509 aa16.74■□□□□ 0.27
PDCD6-203ENST00000505526 APBA1Q02410 837 aa16.74■□□□□ 0.27
PDCD6-203ENST00000505526 Q6ZS52 159 aa16.74■□□□□ 0.27
PDCD6-203ENST00000505526 FAM160A2Q8N612 972 aaPredicted RBP16.74■□□□□ 0.27
PDCD6-203ENST00000505526 APPL2Q8NEU8 664 aa16.74■□□□□ 0.27
PDCD6-203ENST00000505526 DDX1Q92499 740 aaKnown RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms