RNA–Protein interactions for RNA: ENST00000505054.2

SYNE4-207, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 713 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-207ENST00000505054 C4orf50Q6ZRC1 276 aa17.92■□□□□ 0.46
SYNE4-207ENST00000505054 MAML2Q8IZL2 1156 aaPredicted RBP17.92■□□□□ 0.46
SYNE4-207ENST00000505054 CRYBG2Q8N1P7 616 aa17.92■□□□□ 0.46
SYNE4-207ENST00000505054 TNIP3Q96KP6 325 aa17.92■□□□□ 0.46
SYNE4-207ENST00000505054 B3GNT5Q9BYG0 378 aa17.92■□□□□ 0.46
SYNE4-207ENST00000505054 OSBPL6Q9BZF3 934 aa17.92■□□□□ 0.46
SYNE4-207ENST00000505054 CEP250Q9BV73 2442 aa17.92■□□□□ 0.46
SYNE4-207ENST00000505054 SLC9A1P19634 815 aa17.91■□□□□ 0.46
SYNE4-207ENST00000505054 MAGEA11P43364 429 aa17.91■□□□□ 0.46
SYNE4-207ENST00000505054 ALDH1A3P47895 512 aa17.91■□□□□ 0.46
SYNE4-207ENST00000505054 CYP27A1Q02318 531 aa17.91■□□□□ 0.46
SYNE4-207ENST00000505054 APBA1Q02410 837 aa17.91■□□□□ 0.46
SYNE4-207ENST00000505054 PLD1Q13393 1074 aa17.91■□□□□ 0.46
SYNE4-207ENST00000505054 PUM1Q14671 1186 aaKnown RBP eCLIP17.91■□□□□ 0.46
SYNE4-207ENST00000505054 IQCB1Q15051 598 aa17.91■□□□□ 0.46
SYNE4-207ENST00000505054 TRIM65Q6PJ69 517 aa17.91■□□□□ 0.46
SYNE4-207ENST00000505054 NPAS3Q8IXF0 933 aa17.91■□□□□ 0.46
SYNE4-207ENST00000505054 PPM1KQ8N3J5 372 aa17.91■□□□□ 0.46
SYNE4-207ENST00000505054 ITFG1Q8TB96 612 aa17.91■□□□□ 0.46
SYNE4-207ENST00000505054 NT5C1AQ9BXI3 368 aa17.91■□□□□ 0.46
SYNE4-207ENST00000505054 ZNF518BQ9C0D4 1074 aa17.91■□□□□ 0.46
SYNE4-207ENST00000505054 FBXO4Q9UKT5 387 aa17.91■□□□□ 0.46
SYNE4-207ENST00000505054 CLDN5O00501 218 aa17.9■□□□□ 0.46
SYNE4-207ENST00000505054 LAMTOR5O43504 91 aa17.9■□□□□ 0.46
SYNE4-207ENST00000505054 RHOP08100 348 aa17.9■□□□□ 0.46
SYNE4-207ENST00000505054 CCDC130P13994 396 aa17.9■□□□□ 0.46
SYNE4-207ENST00000505054 BDNFP23560 247 aa17.9■□□□□ 0.46
SYNE4-207ENST00000505054 TBXAS1P24557 533 aaPredicted RBP17.9■□□□□ 0.46
SYNE4-207ENST00000505054 EPHB3P54753 998 aa17.9■□□□□ 0.46
SYNE4-207ENST00000505054 GCNT1Q02742 428 aa17.9■□□□□ 0.46
SYNE4-207ENST00000505054 UBXN2BQ14CS0 331 aa17.9■□□□□ 0.46
SYNE4-207ENST00000505054 EXOC3L4Q17RC7 722 aa17.9■□□□□ 0.46
SYNE4-207ENST00000505054 PABPC1LQ4VXU2 614 aaKnown RBP17.9■□□□□ 0.46
SYNE4-207ENST00000505054 ZNF394Q53GI3 561 aa17.9■□□□□ 0.46
SYNE4-207ENST00000505054 SDHAF4Q5VUM1 108 aa17.9■□□□□ 0.46
SYNE4-207ENST00000505054 GBP6Q6ZN66 633 aa17.9■□□□□ 0.46
SYNE4-207ENST00000505054 PAQR9Q6ZVX9 377 aa17.9■□□□□ 0.46
SYNE4-207ENST00000505054 RRAGAQ7L523 313 aa17.9■□□□□ 0.46
SYNE4-207ENST00000505054 HS6ST3Q8IZP7 471 aa17.9■□□□□ 0.46
SYNE4-207ENST00000505054 TTC39CQ8N584 583 aa17.9■□□□□ 0.46
SYNE4-207ENST00000505054 C12orf29Q8N999 325 aa17.9■□□□□ 0.46
SYNE4-207ENST00000505054 SUMF1Q8NBK3 374 aa17.9■□□□□ 0.46
SYNE4-207ENST00000505054 STKLD1Q8NE28 680 aa17.9■□□□□ 0.46
SYNE4-207ENST00000505054 KREMEN1Q96MU8 473 aa17.9■□□□□ 0.46
SYNE4-207ENST00000505054 CORO1BQ9BR76 489 aa17.9■□□□□ 0.46
SYNE4-207ENST00000505054 LRRC3Q9BY71 257 aa17.9■□□□□ 0.46
SYNE4-207ENST00000505054 FAM124BQ9H5Z6 455 aaPredicted RBP17.9■□□□□ 0.46
SYNE4-207ENST00000505054 LTB4R2Q9NPC1 389 aa17.9■□□□□ 0.46
SYNE4-207ENST00000505054 SIX2Q9NPC8 291 aa17.9■□□□□ 0.46
SYNE4-207ENST00000505054 TMEM30AQ9NV96 361 aa17.9■□□□□ 0.46
SYNE4-207ENST00000505054 SPATA6Q9NWH7 488 aaPredicted RBP17.9■□□□□ 0.46
SYNE4-207ENST00000505054 LIMA1Q9UHB6 759 aaKnown RBP17.9■□□□□ 0.46
SYNE4-207ENST00000505054 MED19A0JLT2 244 aaPredicted RBP17.89■□□□□ 0.45
SYNE4-207ENST00000505054 NRG2O14511 850 aaPredicted RBP17.89■□□□□ 0.45
SYNE4-207ENST00000505054 ATP1A3P13637 1013 aa17.89■□□□□ 0.45
SYNE4-207ENST00000505054 PTPN2P17706 415 aa17.89■□□□□ 0.45
SYNE4-207ENST00000505054 ACO1P21399 889 aaKnown RBP17.89■□□□□ 0.45
SYNE4-207ENST00000505054 PON1P27169 355 aa17.89■□□□□ 0.45
SYNE4-207ENST00000505054 CACNA2D1P54289 1103 aa17.89■□□□□ 0.45
SYNE4-207ENST00000505054 RAD23BP54727 409 aa17.89■□□□□ 0.45
SYNE4-207ENST00000505054 EPHA5P54756 1037 aa17.89■□□□□ 0.45
SYNE4-207ENST00000505054 DDR2Q16832 855 aa17.89■□□□□ 0.45
SYNE4-207ENST00000505054 SLC5A9Q2M3M2 681 aa17.89■□□□□ 0.45
SYNE4-207ENST00000505054 SLC44A4Q53GD3 710 aa17.89■□□□□ 0.45
SYNE4-207ENST00000505054 DPY19L2P1Q6NXN4 242 aa17.89■□□□□ 0.45
SYNE4-207ENST00000505054 APTXQ7Z2E3 356 aaKnown RBP17.89■□□□□ 0.45
SYNE4-207ENST00000505054 FAM35AQ86V20 835 aa17.89■□□□□ 0.45
SYNE4-207ENST00000505054 TMC8Q8IU68 726 aa17.89■□□□□ 0.45
SYNE4-207ENST00000505054 FUKQ8N0W3 1084 aa17.89■□□□□ 0.45
SYNE4-207ENST00000505054 ELMOD1Q8N336 334 aa17.89■□□□□ 0.45
SYNE4-207ENST00000505054 SLC4A11Q8NBS3 891 aa17.89■□□□□ 0.45
SYNE4-207ENST00000505054 GIPC2Q8TF65 315 aa17.89■□□□□ 0.45
SYNE4-207ENST00000505054 PSMG2Q969U7 264 aa17.89■□□□□ 0.45
SYNE4-207ENST00000505054 ZNF512Q96ME7 567 aaPredicted RBP17.89■□□□□ 0.45
SYNE4-207ENST00000505054 KXD1Q9BQD3 176 aa17.89■□□□□ 0.45
SYNE4-207ENST00000505054 VPS16Q9H269 839 aa17.89■□□□□ 0.45
SYNE4-207ENST00000505054 CBX8Q9HC52 389 aa17.89■□□□□ 0.45
SYNE4-207ENST00000505054 AVENQ9NQS1 362 aaPredicted RBP17.89■□□□□ 0.45
SYNE4-207ENST00000505054 FAM49BQ9NUQ9 324 aa17.89■□□□□ 0.45
SYNE4-207ENST00000505054 ASB3Q9Y575 518 aa17.89■□□□□ 0.45
SYNE4-207ENST00000505054 COL4A2P08572 1712 aa17.89■□□□□ 0.45
SYNE4-207ENST00000505054 SMTNL1A8MU46 457 aa17.88■□□□□ 0.45
SYNE4-207ENST00000505054 PES1O00541 588 aaKnown RBP17.88■□□□□ 0.45
SYNE4-207ENST00000505054 CCR2P41597 374 aa17.88■□□□□ 0.45
SYNE4-207ENST00000505054 COPB1P53618 953 aaKnown RBP17.88■□□□□ 0.45
SYNE4-207ENST00000505054 YWHAEP62258 255 aaKnown RBP17.88■□□□□ 0.45
SYNE4-207ENST00000505054 RPL10AP62906 217 aaKnown RBP17.88■□□□□ 0.45
SYNE4-207ENST00000505054 PRSS36Q5K4E3 855 aa17.88■□□□□ 0.45
SYNE4-207ENST00000505054 IQCEQ6IPM2 695 aa17.88■□□□□ 0.45
SYNE4-207ENST00000505054 GJB7Q6PEY0 223 aa17.88■□□□□ 0.45
SYNE4-207ENST00000505054 VSTM1Q6UX27 236 aa17.88■□□□□ 0.45
SYNE4-207ENST00000505054 DNAJB7Q7Z6W7 309 aaPredicted RBP17.88■□□□□ 0.45
SYNE4-207ENST00000505054 SCN4BQ8IWT1 228 aa17.88■□□□□ 0.45
SYNE4-207ENST00000505054 DCLK2Q8N568 766 aa17.88■□□□□ 0.45
SYNE4-207ENST00000505054 SLC2A14Q8TDB8 520 aa17.88■□□□□ 0.45
SYNE4-207ENST00000505054 ZNF334Q9HCZ1 680 aaPredicted RBP17.88■□□□□ 0.45
SYNE4-207ENST00000505054 DLL3Q9NYJ7 618 aa17.88■□□□□ 0.45
SYNE4-207ENST00000505054 PCDHGA2Q9Y5H1 932 aa17.88■□□□□ 0.45
SYNE4-207ENST00000505054 GPR179Q6PRD1 2367 aa17.87■□□□□ 0.45
SYNE4-207ENST00000505054 ECI2O75521 394 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms