RNA–Protein interactions for RNA: ENST00000504687.5

LMNA-220, Transcript of lamin A/C, human

TSL 4

Gene LMNA, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-220	ENST00000504687	NLRC5	Q86WI3	1866 aa		13.97	□□□□□ -0.17
LMNA-220	ENST00000504687	LTBP2	Q14767	1821 aa		13.97	□□□□□ -0.17
LMNA-220	ENST00000504687	CASTOR2	A6NHX0	329 aa		13.97	□□□□□ -0.17
LMNA-220	ENST00000504687	ZNF487	B1APH4	448 aa		13.97	□□□□□ -0.17
LMNA-220	ENST00000504687		F8VP50	259 aa		13.97	□□□□□ -0.17
LMNA-220	ENST00000504687	PAPSS1	O43252	624 aa	Predicted RBP	13.97	□□□□□ -0.17
LMNA-220	ENST00000504687	RAD51C	O43502	376 aa		13.97	□□□□□ -0.17
LMNA-220	ENST00000504687	LRCH4	O75427	683 aa		13.97	□□□□□ -0.17
LMNA-220	ENST00000504687	B3GAT3	O94766	335 aa		13.97	□□□□□ -0.17
LMNA-220	ENST00000504687	CCDC130	P13994	396 aa		13.97	□□□□□ -0.17
LMNA-220	ENST00000504687	GPD1	P21695	349 aa		13.97	□□□□□ -0.17
LMNA-220	ENST00000504687	FAAP100	Q0VG06	881 aa		13.97	□□□□□ -0.17
LMNA-220	ENST00000504687	NNT	Q13423	1086 aa		13.97	□□□□□ -0.17
LMNA-220	ENST00000504687	CUL1	Q13616	776 aa		13.97	□□□□□ -0.17
LMNA-220	ENST00000504687	EFHC1	Q5JVL4	640 aa		13.97	□□□□□ -0.17
LMNA-220	ENST00000504687	KIAA0319	Q5VV43	1072 aa		13.97	□□□□□ -0.17
LMNA-220	ENST00000504687	DBF4B	Q8NFT6	615 aa		13.97	□□□□□ -0.17
LMNA-220	ENST00000504687	RTP3	Q9BQQ7	232 aa		13.97	□□□□□ -0.17
LMNA-220	ENST00000504687	PAAF1	Q9BRP4	392 aa		13.97	□□□□□ -0.17
LMNA-220	ENST00000504687	C11orf84	Q9BUA3	381 aa	Predicted RBP	13.97	□□□□□ -0.17
LMNA-220	ENST00000504687	AP1M1	Q9BXS5	423 aa		13.97	□□□□□ -0.17
LMNA-220	ENST00000504687	CSNK1G1	Q9HCP0	422 aa		13.97	□□□□□ -0.17
LMNA-220	ENST00000504687	CRTAC1	Q9NQ79	661 aa		13.97	□□□□□ -0.17
LMNA-220	ENST00000504687	TBC1D13	Q9NVG8	400 aa		13.97	□□□□□ -0.17
LMNA-220	ENST00000504687	ZNF446	Q9NWS9	450 aa		13.97	□□□□□ -0.17
LMNA-220	ENST00000504687	FAM53C	Q9NYF3	392 aa		13.97	□□□□□ -0.17
LMNA-220	ENST00000504687	MICAL3	Q7RTP6	2002 aa		13.97	□□□□□ -0.17
LMNA-220	ENST00000504687	FAM170A	A1A519	330 aa		13.96	□□□□□ -0.17
LMNA-220	ENST00000504687	GOLGA8S	H3BPF8	625 aa		13.96	□□□□□ -0.17
LMNA-220	ENST00000504687	SYN3	O14994	580 aa		13.96	□□□□□ -0.17
LMNA-220	ENST00000504687	RNF8	O76064	485 aa		13.96	□□□□□ -0.17
LMNA-220	ENST00000504687	ENDOD1	O94919	500 aa		13.96	□□□□□ -0.17
LMNA-220	ENST00000504687	FBXO21	O94952	628 aa		13.96	□□□□□ -0.17
LMNA-220	ENST00000504687	HEXIM1	O94992	359 aa	Known RBP	13.96	□□□□□ -0.17
LMNA-220	ENST00000504687	OAZ2	O95190	189 aa		13.96	□□□□□ -0.17
LMNA-220	ENST00000504687	GJB6	O95452	261 aa		13.96	□□□□□ -0.17
LMNA-220	ENST00000504687	DES	P17661	470 aa		13.96	□□□□□ -0.17
LMNA-220	ENST00000504687	IGFBP6	P24592	240 aa	Predicted RBP	13.96	□□□□□ -0.17
LMNA-220	ENST00000504687	TKT	P29401	623 aa	Known RBP	13.96	□□□□□ -0.17
LMNA-220	ENST00000504687	GBP1	P32455	592 aa		13.96	□□□□□ -0.17
LMNA-220	ENST00000504687	GJA8	P48165	433 aa		13.96	□□□□□ -0.17
LMNA-220	ENST00000504687	RNASE9	P60153	205 aa	Known RBP	13.96	□□□□□ -0.17
LMNA-220	ENST00000504687	INTS6L	Q5JSJ4	861 aa	Known RBP	13.96	□□□□□ -0.17
LMNA-220	ENST00000504687	RAB41	Q5JT25	222 aa		13.96	□□□□□ -0.17
LMNA-220	ENST00000504687	OR6B2	Q6IFH4	312 aa		13.96	□□□□□ -0.17
LMNA-220	ENST00000504687	EMB	Q6PCB8	327 aa		13.96	□□□□□ -0.17
LMNA-220	ENST00000504687	DRICH1	Q6PGQ1	229 aa	Predicted RBP	13.96	□□□□□ -0.17
LMNA-220	ENST00000504687	SYDE1	Q6ZW31	735 aa	Predicted RBP	13.96	□□□□□ -0.17
LMNA-220	ENST00000504687	ZDHHC14	Q8IZN3	488 aa		13.96	□□□□□ -0.17
LMNA-220	ENST00000504687	THEM5	Q8N1Q8	247 aa		13.96	□□□□□ -0.17
LMNA-220	ENST00000504687	ARFGAP1	Q8N6T3	406 aa		13.96	□□□□□ -0.17
LMNA-220	ENST00000504687	RNF169	Q8NCN4	708 aa		13.96	□□□□□ -0.17
LMNA-220	ENST00000504687	CMAS	Q8NFW8	434 aa	Predicted RBP	13.96	□□□□□ -0.17
LMNA-220	ENST00000504687	AEN	Q8WTP8	325 aa	Known RBP	13.96	□□□□□ -0.17
LMNA-220	ENST00000504687	HDAC7	Q8WUI4	952 aa		13.96	□□□□□ -0.17
LMNA-220	ENST00000504687	TEKT4	Q8WW24	435 aa		13.96	□□□□□ -0.17
LMNA-220	ENST00000504687	CENPI	Q92674	756 aa	Predicted RBP	13.96	□□□□□ -0.17
LMNA-220	ENST00000504687	TBCB	Q99426	244 aa		13.96	□□□□□ -0.17
LMNA-220	ENST00000504687	TMEM175	Q9BSA9	504 aa		13.96	□□□□□ -0.17
LMNA-220	ENST00000504687	MRPL9	Q9BYD2	267 aa	Known RBP	13.96	□□□□□ -0.17
LMNA-220	ENST00000504687	B3GNT5	Q9BYG0	378 aa		13.96	□□□□□ -0.17
LMNA-220	ENST00000504687	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	13.96	□□□□□ -0.17
LMNA-220	ENST00000504687	FAM129A	Q9BZQ8	928 aa		13.96	□□□□□ -0.17
LMNA-220	ENST00000504687	DDX47	Q9H0S4	455 aa	Known RBP	13.96	□□□□□ -0.17
LMNA-220	ENST00000504687	RAB17	Q9H0T7	212 aa		13.96	□□□□□ -0.17
LMNA-220	ENST00000504687	HIPK3	Q9H422	1215 aa		13.96	□□□□□ -0.17
LMNA-220	ENST00000504687	ST7	Q9NRC1	585 aa		13.96	□□□□□ -0.17
LMNA-220	ENST00000504687	FEZ2	Q9UHY8	353 aa	Predicted RBP	13.96	□□□□□ -0.17
LMNA-220	ENST00000504687	TBX21	Q9UL17	535 aa		13.96	□□□□□ -0.17
LMNA-220	ENST00000504687	NR2E1	Q9Y466	385 aa		13.96	□□□□□ -0.17
LMNA-220	ENST00000504687	PCDHB7	Q9Y5E2	793 aa		13.96	□□□□□ -0.17
LMNA-220	ENST00000504687	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	13.95	□□□□□ -0.18
LMNA-220	ENST00000504687	TULP2	O00295	520 aa		13.95	□□□□□ -0.18
LMNA-220	ENST00000504687	MAP2K7	O14733	419 aa		13.95	□□□□□ -0.18
LMNA-220	ENST00000504687	HCRT	O43612	131 aa		13.95	□□□□□ -0.18
LMNA-220	ENST00000504687	TRAPPC3	O43617	180 aa		13.95	□□□□□ -0.18
LMNA-220	ENST00000504687	DDHD2	O94830	711 aa		13.95	□□□□□ -0.18
LMNA-220	ENST00000504687	FAM200B	P0CF97	657 aa		13.95	□□□□□ -0.18
LMNA-220	ENST00000504687	RARA	P10276	462 aa		13.95	□□□□□ -0.18
LMNA-220	ENST00000504687	ADORA2B	P29275	332 aa		13.95	□□□□□ -0.18
LMNA-220	ENST00000504687	PTGIR	P43119	386 aa		13.95	□□□□□ -0.18
LMNA-220	ENST00000504687	EPHB4	P54760	987 aa		13.95	□□□□□ -0.18
LMNA-220	ENST00000504687	RBM10	P98175	930 aa	Known RBP	13.95	□□□□□ -0.18
LMNA-220	ENST00000504687	CCNG2	Q16589	344 aa		13.95	□□□□□ -0.18
LMNA-220	ENST00000504687	CLEC20A	Q6ZU45	233 aa		13.95	□□□□□ -0.18
LMNA-220	ENST00000504687	PIGZ	Q86VD9	579 aa		13.95	□□□□□ -0.18
LMNA-220	ENST00000504687	NPAS4	Q8IUM7	802 aa		13.95	□□□□□ -0.18
LMNA-220	ENST00000504687	FAM71B	Q8TC56	605 aa		13.95	□□□□□ -0.18
LMNA-220	ENST00000504687	RXFP2	Q8WXD0	754 aa		13.95	□□□□□ -0.18
LMNA-220	ENST00000504687	CAVIN3	Q969G5	261 aa		13.95	□□□□□ -0.18
LMNA-220	ENST00000504687	SMARCD1	Q96GM5	515 aa		13.95	□□□□□ -0.18
LMNA-220	ENST00000504687	SLITRK1	Q96PX8	696 aa		13.95	□□□□□ -0.18
LMNA-220	ENST00000504687	DDX23	Q9BUQ8	820 aa	Known RBP	13.95	□□□□□ -0.18
LMNA-220	ENST00000504687	OXCT2	Q9BYC2	517 aa	Predicted RBP	13.95	□□□□□ -0.18
LMNA-220	ENST00000504687	FUT8	Q9BYC5	575 aa		13.95	□□□□□ -0.18
LMNA-220	ENST00000504687	OSBPL8	Q9BZF1	889 aa		13.95	□□□□□ -0.18
LMNA-220	ENST00000504687	VIPAS39	Q9H9C1	493 aa		13.95	□□□□□ -0.18
LMNA-220	ENST00000504687	INPP5F	Q9Y2H2	1132 aa		13.95	□□□□□ -0.18
LMNA-220	ENST00000504687	HTT	P42858	3142 aa		13.95	□□□□□ -0.18
LMNA-220	ENST00000504687	SCN5A	Q14524	2016 aa		13.95	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms