RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 CTAGE9A4FU28 777 aa10.96□□□□□ -0.65
TPM3-217ENST00000504663 PDE2AO00408 941 aaPredicted RBP10.96□□□□□ -0.65
TPM3-217ENST00000504663 PIK3R2O00459 728 aa10.96□□□□□ -0.65
TPM3-217ENST00000504663 GPR37O15354 613 aa10.96□□□□□ -0.65
TPM3-217ENST00000504663 ADAM12O43184 909 aa10.96□□□□□ -0.65
TPM3-217ENST00000504663 SRGAP2O75044 1071 aa10.96□□□□□ -0.65
TPM3-217ENST00000504663 TADA2AO75478 443 aa10.96□□□□□ -0.65
TPM3-217ENST00000504663 FGBP02675 491 aa10.96□□□□□ -0.65
TPM3-217ENST00000504663 ALDH2P05091 517 aa10.96□□□□□ -0.65
TPM3-217ENST00000504663 TCF4P15884 667 aa10.96□□□□□ -0.65
TPM3-217ENST00000504663 COMTP21964 271 aa10.96□□□□□ -0.65
TPM3-217ENST00000504663 NOP2P46087 812 aaKnown RBP10.96□□□□□ -0.65
TPM3-217ENST00000504663 YWHAHQ04917 246 aaPredicted RBP10.96□□□□□ -0.65
TPM3-217ENST00000504663 ZNF268Q14587 947 aaPredicted RBP10.96□□□□□ -0.65
TPM3-217ENST00000504663 TAF5Q15542 800 aa10.96□□□□□ -0.65
TPM3-217ENST00000504663 PTPROQ16827 1216 aa10.96□□□□□ -0.65
TPM3-217ENST00000504663 OTUD1Q5VV17 481 aaPredicted RBP10.96□□□□□ -0.65
TPM3-217ENST00000504663 DAB2IPQ5VWQ8 1189 aa10.96□□□□□ -0.65
TPM3-217ENST00000504663 DNAJC24Q6P3W2 148 aa10.96□□□□□ -0.65
TPM3-217ENST00000504663 PIGZQ86VD9 579 aa10.96□□□□□ -0.65
TPM3-217ENST00000504663 NIPA2Q8N8Q9 360 aa10.96□□□□□ -0.65
TPM3-217ENST00000504663 FEZF2Q8TBJ5 459 aa10.96□□□□□ -0.65
TPM3-217ENST00000504663 COG1Q8WTW3 980 aa10.96□□□□□ -0.65
TPM3-217ENST00000504663 KCTD13Q8WZ19 329 aa10.96□□□□□ -0.65
TPM3-217ENST00000504663 ALG3Q92685 438 aa10.96□□□□□ -0.65
TPM3-217ENST00000504663 KRT35Q92764 455 aa10.96□□□□□ -0.65
TPM3-217ENST00000504663 C18orf8Q96DM3 657 aa10.96□□□□□ -0.65
TPM3-217ENST00000504663 CALR3Q96L12 384 aaKnown RBP10.96□□□□□ -0.65
TPM3-217ENST00000504663 HSFY1Q96LI6 401 aa10.96□□□□□ -0.65
TPM3-217ENST00000504663 ALS2CR12Q96Q35 445 aa10.96□□□□□ -0.65
TPM3-217ENST00000504663 C11orf84Q9BUA3 381 aaPredicted RBP10.96□□□□□ -0.65
TPM3-217ENST00000504663 HERC2P3Q9BVR0 1158 aa10.96□□□□□ -0.65
TPM3-217ENST00000504663 METTL5Q9NRN9 209 aaKnown RBP10.96□□□□□ -0.65
TPM3-217ENST00000504663 MTRRQ9UBK8 725 aa10.96□□□□□ -0.65
TPM3-217ENST00000504663 ANAPC7Q9UJX3 599 aa10.96□□□□□ -0.65
TPM3-217ENST00000504663 ALG6Q9Y672 507 aa10.96□□□□□ -0.65
TPM3-217ENST00000504663 SCINQ9Y6U3 715 aa10.96□□□□□ -0.65
TPM3-217ENST00000504663 ZNF638Q14966 1978 aaKnown RBP10.96□□□□□ -0.66
TPM3-217ENST00000504663 CHD9Q3L8U1 2897 aa10.95□□□□□ -0.66
TPM3-217ENST00000504663 ARHGEF37A1IGU5 675 aa10.95□□□□□ -0.66
TPM3-217ENST00000504663 SIGLEC16A6NMB1 481 aa10.95□□□□□ -0.66
TPM3-217ENST00000504663 TNFRSF10BO14763 440 aa10.95□□□□□ -0.66
TPM3-217ENST00000504663 ZNF185O15231 689 aa10.95□□□□□ -0.66
TPM3-217ENST00000504663 PROSCO94903 275 aa10.95□□□□□ -0.66
TPM3-217ENST00000504663 FAM200BP0CF97 657 aa10.95□□□□□ -0.66
TPM3-217ENST00000504663 PRLRP16471 622 aa10.95□□□□□ -0.66
TPM3-217ENST00000504663 CTNNA2P26232 953 aa10.95□□□□□ -0.66
TPM3-217ENST00000504663 MAN1A1P33908 653 aa10.95□□□□□ -0.66
TPM3-217ENST00000504663 RFC1P35251 1148 aaPredicted RBP10.95□□□□□ -0.66
TPM3-217ENST00000504663 FLT3P36888 993 aa10.95□□□□□ -0.66
TPM3-217ENST00000504663 SCNN1AP37088 669 aa10.95□□□□□ -0.66
TPM3-217ENST00000504663 PEX5P50542 639 aa10.95□□□□□ -0.66
TPM3-217ENST00000504663 TAS2R40P59535 323 aa10.95□□□□□ -0.66
TPM3-217ENST00000504663 IFI16Q16666 785 aaKnown RBP10.95□□□□□ -0.66
TPM3-217ENST00000504663 RAB6CQ53S08 254 aa10.95□□□□□ -0.66
TPM3-217ENST00000504663 LIN9Q5TKA1 542 aa10.95□□□□□ -0.66
TPM3-217ENST00000504663 PRSS55Q6UWB4 352 aaPredicted RBP10.95□□□□□ -0.66
TPM3-217ENST00000504663 CYP4V2Q6ZWL3 525 aaPredicted RBP10.95□□□□□ -0.66
TPM3-217ENST00000504663 BNIPLQ7Z465 357 aa10.95□□□□□ -0.66
TPM3-217ENST00000504663 SPRED2Q7Z698 418 aa10.95□□□□□ -0.66
TPM3-217ENST00000504663 METTL23Q86XA0 190 aa10.95□□□□□ -0.66
TPM3-217ENST00000504663 CREG2Q8IUH2 290 aa10.95□□□□□ -0.66
TPM3-217ENST00000504663 HERC6Q8IVU3 1022 aa10.95□□□□□ -0.66
TPM3-217ENST00000504663 TTC9BQ8N6N2 239 aa10.95□□□□□ -0.66
TPM3-217ENST00000504663 EMC1Q8N766 993 aa10.95□□□□□ -0.66
TPM3-217ENST00000504663 FNIP1Q8TF40 1166 aa10.95□□□□□ -0.66
TPM3-217ENST00000504663 PIK3R5Q8WYR1 880 aa10.95□□□□□ -0.66
TPM3-217ENST00000504663 CLP1Q92989 425 aaKnown RBP10.95□□□□□ -0.66
TPM3-217ENST00000504663 SMARCD1Q96GM5 515 aa10.95□□□□□ -0.66
TPM3-217ENST00000504663 MCEEQ96PE7 176 aa10.95□□□□□ -0.66
TPM3-217ENST00000504663 OSBPL9Q96SU4 736 aa10.95□□□□□ -0.66
TPM3-217ENST00000504663 KCNK16Q96T55 309 aa10.95□□□□□ -0.66
TPM3-217ENST00000504663 UBXN6Q9BZV1 441 aa10.95□□□□□ -0.66
TPM3-217ENST00000504663 RAB6CQ9H0N0 254 aa10.95□□□□□ -0.66
TPM3-217ENST00000504663 PARVAQ9NVD7 372 aa10.95□□□□□ -0.66
TPM3-217ENST00000504663 WDR35Q9P2L0 1181 aa10.95□□□□□ -0.66
TPM3-217ENST00000504663 HESX1Q9UBX0 185 aa10.95□□□□□ -0.66
TPM3-217ENST00000504663 CDC23Q9UJX2 597 aa10.95□□□□□ -0.66
TPM3-217ENST00000504663 STRIP2Q9ULQ0 834 aa10.95□□□□□ -0.66
TPM3-217ENST00000504663 CEP83Q9Y592 693 aa10.95□□□□□ -0.66
TPM3-217ENST00000504663 MTMR11A4FU01 709 aa10.94□□□□□ -0.66
TPM3-217ENST00000504663 C2CD4BA6NLJ0 364 aa10.94□□□□□ -0.66
TPM3-217ENST00000504663 GOLGA8SH3BPF8 625 aa10.94□□□□□ -0.66
TPM3-217ENST00000504663 DPYSL4O14531 572 aa10.94□□□□□ -0.66
TPM3-217ENST00000504663 TRAPPC3O43617 180 aa10.94□□□□□ -0.66
TPM3-217ENST00000504663 LILRB3O75022 631 aa10.94□□□□□ -0.66
TPM3-217ENST00000504663 AP1G2O75843 785 aa10.94□□□□□ -0.66
TPM3-217ENST00000504663 SOD2P04179 222 aa10.94□□□□□ -0.66
TPM3-217ENST00000504663 LAG3P18627 525 aa10.94□□□□□ -0.66
TPM3-217ENST00000504663 NDUFV1P49821 464 aa10.94□□□□□ -0.66
TPM3-217ENST00000504663 MAP3K7CLP57077 242 aa10.94□□□□□ -0.66
TPM3-217ENST00000504663 SLC6A3Q01959 620 aa10.94□□□□□ -0.66
TPM3-217ENST00000504663 DSG1Q02413 1049 aa10.94□□□□□ -0.66
TPM3-217ENST00000504663 ELAVL2Q12926 359 aaKnown RBP10.94□□□□□ -0.66
TPM3-217ENST00000504663 BTG3Q14201 252 aaPredicted RBP10.94□□□□□ -0.66
TPM3-217ENST00000504663 MESDQ14696 234 aa10.94□□□□□ -0.66
TPM3-217ENST00000504663 CFAP221Q4G0U5 840 aa10.94□□□□□ -0.66
TPM3-217ENST00000504663 SLC39A12Q504Y0 691 aa10.94□□□□□ -0.66
TPM3-217ENST00000504663 C9orf50Q5SZB4 431 aa10.94□□□□□ -0.66
TPM3-217ENST00000504663 TXNRD3NBQ6F5E7 133 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms