RNA–Protein interactions for RNA: ENST00000504543.1

USP17L28-201, Transcript of ubiquitin specific peptidase 17-like family member 28, humanhuman

APPRIS P1 BASIC

Gene USP17L28, Length 1,593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L28-201ENST00000504543 ACTRT1Q8TDG2 376 aa10.8□□□□□ -0.68
USP17L28-201ENST00000504543 SLC22A17Q8WUG5 538 aa10.8□□□□□ -0.68
USP17L28-201ENST00000504543 CASP10Q92851 521 aa10.8□□□□□ -0.68
USP17L28-201ENST00000504543 ZNF653Q96CK0 615 aa10.8□□□□□ -0.68
USP17L28-201ENST00000504543 KLHL5Q96PQ7 755 aa10.8□□□□□ -0.68
USP17L28-201ENST00000504543 SELENOOQ9BVL4 669 aa10.8□□□□□ -0.68
USP17L28-201ENST00000504543 PARD6BQ9BYG5 372 aa10.8□□□□□ -0.68
USP17L28-201ENST00000504543 ACP6Q9NPH0 428 aa10.8□□□□□ -0.68
USP17L28-201ENST00000504543 DZANK1Q9NVP4 752 aa10.8□□□□□ -0.68
USP17L28-201ENST00000504543 CTTNBP2NLQ9P2B4 639 aa10.8□□□□□ -0.68
USP17L28-201ENST00000504543 SIX4Q9UIU6 781 aa10.8□□□□□ -0.68
USP17L28-201ENST00000504543 TTC7AQ9ULT0 858 aaPredicted RBP10.8□□□□□ -0.68
USP17L28-201ENST00000504543 MTCL1Q9Y4B5 1905 aaKnown RBP10.79□□□□□ -0.68
USP17L28-201ENST00000504543 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.79□□□□□ -0.68
USP17L28-201ENST00000504543 HIDE1A8MVS5 230 aa10.79□□□□□ -0.68
USP17L28-201ENST00000504543 KPNA7A9QM74 516 aa10.79□□□□□ -0.68
USP17L28-201ENST00000504543 F8W810 466 aa10.79□□□□□ -0.68
USP17L28-201ENST00000504543 TULP1O00294 542 aaPredicted RBP10.79□□□□□ -0.68
USP17L28-201ENST00000504543 ATP8B1O43520 1251 aa10.79□□□□□ -0.68
USP17L28-201ENST00000504543 RRP9O43818 475 aaKnown RBP10.79□□□□□ -0.68
USP17L28-201ENST00000504543 CLASP2O75122 1294 aaKnown RBP10.79□□□□□ -0.68
USP17L28-201ENST00000504543 POU2F2P09086 479 aa10.79□□□□□ -0.68
USP17L28-201ENST00000504543 CNPP09543 421 aaKnown RBP10.79□□□□□ -0.68
USP17L28-201ENST00000504543 ODC1P11926 461 aa10.79□□□□□ -0.68
USP17L28-201ENST00000504543 P4HA1P13674 534 aa10.79□□□□□ -0.68
USP17L28-201ENST00000504543 NOMO3P69849 1222 aa10.79□□□□□ -0.68
USP17L28-201ENST00000504543 MYO1EQ12965 1108 aa10.79□□□□□ -0.68
USP17L28-201ENST00000504543 RAB33AQ14088 237 aa10.79□□□□□ -0.68
USP17L28-201ENST00000504543 PSMD5Q16401 504 aa10.79□□□□□ -0.68
USP17L28-201ENST00000504543 ZNF667Q5HYK9 610 aa10.79□□□□□ -0.68
USP17L28-201ENST00000504543 RTP2Q5QGT7 225 aa10.79□□□□□ -0.68
USP17L28-201ENST00000504543 PLPP4Q5VZY2 271 aa10.79□□□□□ -0.68
USP17L28-201ENST00000504543 SLC8B1Q6J4K2 584 aa10.79□□□□□ -0.68
USP17L28-201ENST00000504543 LILRA6Q6PI73 481 aa10.79□□□□□ -0.68
USP17L28-201ENST00000504543 MON1BQ7L1V2 547 aa10.79□□□□□ -0.68
USP17L28-201ENST00000504543 ADGRD2Q7Z7M1 963 aa10.79□□□□□ -0.68
USP17L28-201ENST00000504543 PHF13Q86YI8 300 aaPredicted RBP10.79□□□□□ -0.68
USP17L28-201ENST00000504543 TMEM86AQ8N2M4 240 aa10.79□□□□□ -0.68
USP17L28-201ENST00000504543 TTC39CQ8N584 583 aa10.79□□□□□ -0.68
USP17L28-201ENST00000504543 ZNF564Q8TBZ8 553 aaPredicted RBP10.79□□□□□ -0.68
USP17L28-201ENST00000504543 ATXN2LQ8WWM7 1075 aaKnown RBP10.79□□□□□ -0.68
USP17L28-201ENST00000504543 RIN2Q8WYP3 895 aaPredicted RBP10.79□□□□□ -0.68
USP17L28-201ENST00000504543 HLA-CQ95604 372 aa10.79□□□□□ -0.68
USP17L28-201ENST00000504543 CARD9Q9H257 536 aa10.79□□□□□ -0.68
USP17L28-201ENST00000504543 PLEKHA4Q9H4M7 779 aa10.79□□□□□ -0.68
USP17L28-201ENST00000504543 CISHQ9NSE2 258 aa10.79□□□□□ -0.68
USP17L28-201ENST00000504543 OR6C75A6NL08 312 aa10.78□□□□□ -0.68
USP17L28-201ENST00000504543 PGRMC1O00264 195 aaKnown RBP10.78□□□□□ -0.68
USP17L28-201ENST00000504543 KCNK3O14649 394 aa10.78□□□□□ -0.68
USP17L28-201ENST00000504543 TEX28O15482 410 aa10.78□□□□□ -0.68
USP17L28-201ENST00000504543 ERLIN1O75477 346 aa10.78□□□□□ -0.68
USP17L28-201ENST00000504543 CLSTN1O94985 981 aa10.78□□□□□ -0.68
USP17L28-201ENST00000504543 ZRANB2O95218 330 aaKnown RBP eCLIP10.78□□□□□ -0.68
USP17L28-201ENST00000504543 ITGB3P05106 788 aa10.78□□□□□ -0.68
USP17L28-201ENST00000504543 CXCR5P32302 372 aa10.78□□□□□ -0.68
USP17L28-201ENST00000504543 CDH5P33151 784 aaPredicted RBP10.78□□□□□ -0.68
USP17L28-201ENST00000504543 NSFP46459 744 aaKnown RBP10.78□□□□□ -0.68
USP17L28-201ENST00000504543 BRCC3P46736 316 aa10.78□□□□□ -0.68
USP17L28-201ENST00000504543 NRIP1P48552 1158 aa10.78□□□□□ -0.68
USP17L28-201ENST00000504543 C2orf54Q08AI8 447 aa10.78□□□□□ -0.68
USP17L28-201ENST00000504543 SMARCB1Q12824 385 aa10.78□□□□□ -0.68
USP17L28-201ENST00000504543 LEXMQ3ZCV2 418 aa10.78□□□□□ -0.68
USP17L28-201ENST00000504543 GLE1Q53GS7 698 aaKnown RBP10.78□□□□□ -0.68
USP17L28-201ENST00000504543 TPGS2Q68CL5 300 aa10.78□□□□□ -0.68
USP17L28-201ENST00000504543 ZNF280DQ6N043 979 aa10.78□□□□□ -0.68
USP17L28-201ENST00000504543 TMCO3Q6UWJ1 677 aa10.78□□□□□ -0.68
USP17L28-201ENST00000504543 MCOLN2Q8IZK6 566 aa10.78□□□□□ -0.68
USP17L28-201ENST00000504543 TOP6BLQ8N6T0 577 aa10.78□□□□□ -0.68
USP17L28-201ENST00000504543 CMASQ8NFW8 434 aaPredicted RBP10.78□□□□□ -0.68
USP17L28-201ENST00000504543 ELMO3Q96BJ8 720 aa10.78□□□□□ -0.68
USP17L28-201ENST00000504543 SENP8Q96LD8 212 aa10.78□□□□□ -0.68
USP17L28-201ENST00000504543 PNKPQ96T60 521 aa10.78□□□□□ -0.68
USP17L28-201ENST00000504543 PSMB7Q99436 277 aa10.78□□□□□ -0.68
USP17L28-201ENST00000504543 CLSTN3Q9BQT9 956 aa10.78□□□□□ -0.68
USP17L28-201ENST00000504543 NUP85Q9BW27 656 aa10.78□□□□□ -0.68
USP17L28-201ENST00000504543 ZNF518BQ9C0D4 1074 aa10.78□□□□□ -0.68
USP17L28-201ENST00000504543 PDCL3Q9H2J4 239 aa10.78□□□□□ -0.68
USP17L28-201ENST00000504543 UBE2ZQ9H832 354 aaPredicted RBP10.78□□□□□ -0.68
USP17L28-201ENST00000504543 CYP3A43Q9HB55 503 aa10.78□□□□□ -0.68
USP17L28-201ENST00000504543 THEGQ9P2T0 379 aa10.78□□□□□ -0.68
USP17L28-201ENST00000504543 HSFX1Q9UBD0 423 aa10.78□□□□□ -0.68
USP17L28-201ENST00000504543 CACNG4Q9UBN1 327 aa10.78□□□□□ -0.68
USP17L28-201ENST00000504543 TMEM59LQ9UK28 342 aa10.78□□□□□ -0.68
USP17L28-201ENST00000504543 PCDHGC3Q9UN70 934 aa10.78□□□□□ -0.68
USP17L28-201ENST00000504543 PACSIN2Q9UNF0 486 aaPredicted RBP10.78□□□□□ -0.68
USP17L28-201ENST00000504543 AGAP1Q9UPQ3 857 aa10.78□□□□□ -0.68
USP17L28-201ENST00000504543 PPEF2O14830 753 aa10.77□□□□□ -0.68
USP17L28-201ENST00000504543 DDX3YO15523 660 aaKnown RBP10.77□□□□□ -0.68
USP17L28-201ENST00000504543 THAP12O43422 761 aa10.77□□□□□ -0.68
USP17L28-201ENST00000504543 PAEPP09466 180 aa10.77□□□□□ -0.68
USP17L28-201ENST00000504543 TKTP29401 623 aaKnown RBP10.77□□□□□ -0.68
USP17L28-201ENST00000504543 POLR2BP30876 1174 aaKnown RBP10.77□□□□□ -0.68
USP17L28-201ENST00000504543 HOXA9P31269 272 aa10.77□□□□□ -0.68
USP17L28-201ENST00000504543 LTBRP36941 435 aa10.77□□□□□ -0.68
USP17L28-201ENST00000504543 CLCN4P51793 760 aa10.77□□□□□ -0.68
USP17L28-201ENST00000504543 VARS2Q5ST30 1063 aaKnown RBP10.77□□□□□ -0.68
USP17L28-201ENST00000504543 CC2D1AQ6P1N0 951 aaPredicted RBP10.77□□□□□ -0.68
USP17L28-201ENST00000504543 DSTYKQ6XUX3 929 aa10.77□□□□□ -0.68
USP17L28-201ENST00000504543 UBL4BQ8N7F7 174 aa10.77□□□□□ -0.68
USP17L28-201ENST00000504543 MSLNLQ96KJ4 702 aa10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms