RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 MORC3Q14149 939 aa6.48□□□□□ -1.37
CLCN3-204ENST00000504131 KLHL12Q53G59 568 aa6.48□□□□□ -1.37
CLCN3-204ENST00000504131 ARMCX5Q6P1M9 558 aa6.48□□□□□ -1.37
CLCN3-204ENST00000504131 BNC2Q6ZN30 1099 aaPredicted RBP6.48□□□□□ -1.37
CLCN3-204ENST00000504131 AGAP11Q8TF27 550 aa6.48□□□□□ -1.37
CLCN3-204ENST00000504131 CEP95Q96GE4 821 aa6.48□□□□□ -1.37
CLCN3-204ENST00000504131 DACH2Q96NX9 599 aa6.48□□□□□ -1.37
CLCN3-204ENST00000504131 BBS4Q96RK4 519 aa6.48□□□□□ -1.37
CLCN3-204ENST00000504131 CCT8L2Q96SF2 557 aa6.48□□□□□ -1.37
CLCN3-204ENST00000504131 MRPS26Q9BYN8 205 aaKnown RBP6.48□□□□□ -1.37
CLCN3-204ENST00000504131 SYTL2Q9HCH5 934 aa6.48□□□□□ -1.37
CLCN3-204ENST00000504131 ETNK2Q9NVF9 386 aa6.48□□□□□ -1.37
CLCN3-204ENST00000504131 PCDHB15Q9Y5E8 787 aa6.48□□□□□ -1.37
CLCN3-204ENST00000504131 MAFBQ9Y5Q3 323 aaPredicted RBP6.48□□□□□ -1.37
CLCN3-204ENST00000504131 KIAA1107Q9UPP5 1409 aa6.48□□□□□ -1.37
CLCN3-204ENST00000504131 PSDA5PKW4 1024 aaPredicted RBP6.48□□□□□ -1.37
CLCN3-204ENST00000504131 DCLK1O15075 740 aa6.48□□□□□ -1.37
CLCN3-204ENST00000504131 ATMINO43313 823 aaPredicted RBP6.48□□□□□ -1.37
CLCN3-204ENST00000504131 PROM1O43490 865 aa6.48□□□□□ -1.37
CLCN3-204ENST00000504131 QDPRP09417 244 aa6.48□□□□□ -1.37
CLCN3-204ENST00000504131 RAD52P43351 418 aa6.48□□□□□ -1.37
CLCN3-204ENST00000504131 INPP1P49441 399 aa6.48□□□□□ -1.37
CLCN3-204ENST00000504131 COPS2P61201 443 aa6.48□□□□□ -1.37
CLCN3-204ENST00000504131 PSMC6P62333 389 aa6.48□□□□□ -1.37
CLCN3-204ENST00000504131 ZNF674Q2M3X9 581 aa6.48□□□□□ -1.37
CLCN3-204ENST00000504131 KLHL26Q53HC5 615 aa6.48□□□□□ -1.37
CLCN3-204ENST00000504131 KCNT1Q5JUK3 1230 aa6.48□□□□□ -1.37
CLCN3-204ENST00000504131 LIN9Q5TKA1 542 aa6.48□□□□□ -1.37
CLCN3-204ENST00000504131 ALS2CLQ60I27 953 aa6.48□□□□□ -1.37
CLCN3-204ENST00000504131 BHLHB9Q6PI77 547 aa6.48□□□□□ -1.37
CLCN3-204ENST00000504131 SLC30A10Q6XR72 485 aa6.48□□□□□ -1.37
CLCN3-204ENST00000504131 FRMD5Q7Z6J6 570 aa6.48□□□□□ -1.37
CLCN3-204ENST00000504131 SLC15A3Q8IY34 581 aa6.48□□□□□ -1.37
CLCN3-204ENST00000504131 TRPC4APQ8TEL6 797 aa6.48□□□□□ -1.37
CLCN3-204ENST00000504131 BTN2A2Q8WVV5 523 aa6.48□□□□□ -1.37
CLCN3-204ENST00000504131 ERLEC1Q96DZ1 483 aa6.48□□□□□ -1.37
CLCN3-204ENST00000504131 MAGED4Q96JG8 741 aa6.48□□□□□ -1.37
CLCN3-204ENST00000504131 ELAC2Q9BQ52 826 aaKnown RBP6.48□□□□□ -1.37
CLCN3-204ENST00000504131 NCOR1P1Q9H4R4 102 aa6.48□□□□□ -1.37
CLCN3-204ENST00000504131 MAGEF1Q9HAY2 307 aa6.48□□□□□ -1.37
CLCN3-204ENST00000504131 CRLF2Q9HC73 371 aa6.48□□□□□ -1.37
CLCN3-204ENST00000504131 GPR108Q9NPR9 543 aa6.48□□□□□ -1.37
CLCN3-204ENST00000504131 IARS2Q9NSE4 1012 aaKnown RBP6.48□□□□□ -1.37
CLCN3-204ENST00000504131 NMRK1Q9NWW6 199 aa6.48□□□□□ -1.37
CLCN3-204ENST00000504131 NKIRAS1Q9NYS0 192 aa6.48□□□□□ -1.37
CLCN3-204ENST00000504131 UBA2Q9UBT2 640 aaPredicted RBP6.48□□□□□ -1.37
CLCN3-204ENST00000504131 TTC21BQ7Z4L5 1316 aa6.48□□□□□ -1.37
CLCN3-204ENST00000504131 A2MP01023 1474 aa6.48□□□□□ -1.37
CLCN3-204ENST00000504131 ESYT3A0FGR9 886 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 CBY3A6NI87 242 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 F6X3S4 739 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 ECE2O60344 883 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 PIGNO95427 931 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 CRTAMO95727 393 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 TNNC2P02585 160 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 RB1P06400 928 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 CCNFP41002 786 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 GBE1Q04446 702 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 ITGADQ13349 1161 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 RNF151Q2KHN1 245 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 PRR5LQ6MZQ0 368 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 SLC22A25Q6T423 547 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 ZNF704Q6ZNC4 412 aaPredicted RBP6.47□□□□□ -1.37
CLCN3-204ENST00000504131 UTS2BQ765I0 119 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 ZNF280BQ86YH2 543 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 LSMEM1Q8N8F7 131 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 ZNF540Q8NDQ6 660 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 CABLES1Q8TDN4 633 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 ST7LQ8TDW4 575 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 MYDGFQ969H8 173 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 KLHL32Q96NJ5 620 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 YIPF4Q9BSR8 244 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 EIF2B3Q9NR50 452 aaKnown RBP6.47□□□□□ -1.37
CLCN3-204ENST00000504131 IMPACTQ9P2X3 320 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 TRPC5Q9UL62 973 aaPredicted RBP6.47□□□□□ -1.37
CLCN3-204ENST00000504131 PITPNM2Q9BZ72 1349 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 ATP10BO94823 1461 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 PREX2Q70Z35 1606 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 ITSN2Q9NZM3 1697 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 SUPT6HQ7KZ85 1726 aaKnown RBP6.47□□□□□ -1.37
CLCN3-204ENST00000504131 MAGI2Q86UL8 1455 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 OR6C74A6NCV1 312 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 CENPXA8MT69 81 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 FADS2P1A8MWK0 482 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 J3KRW8 73 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 GNAO1P09471 354 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 GPD2P43304 727 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 GSTM4Q03013 218 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 GLO1Q04760 184 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 SIGIRRQ6IA17 410 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 DPY19L2Q6NUT2 758 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 NATD1Q8N6N6 113 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 ZNF565Q8N9K5 539 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 MAFIPQ8WZ33 124 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 ADIPOR1Q96A54 375 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 APBA2Q99767 749 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 ADPGKQ9BRR6 497 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.47□□□□□ -1.37
CLCN3-204ENST00000504131 RHBGQ9H310 441 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 SLC12A6Q9UHW9 1150 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms