RNA–Protein interactions for RNA: ENST00000503974.5

PDLIM5-207, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 2,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-207ENST00000503974 XPO6Q96QU8 1125 aaKnown RBP10.06□□□□□ -0.8
PDLIM5-207ENST00000503974 NIFKQ9BYG3 293 aaKnown RBP10.06□□□□□ -0.8
PDLIM5-207ENST00000503974 NT5C3AQ9H0P0 336 aa10.06□□□□□ -0.8
PDLIM5-207ENST00000503974 XAB2Q9HCS7 855 aaKnown RBP10.06□□□□□ -0.8
PDLIM5-207ENST00000503974 THAP1Q9NVV9 213 aa10.06□□□□□ -0.8
PDLIM5-207ENST00000503974 COL1A2P08123 1366 aa10.06□□□□□ -0.8
PDLIM5-207ENST00000503974 A0A0U1RQJ8 604 aa10.06□□□□□ -0.8
PDLIM5-207ENST00000503974 HGSO14964 777 aaPredicted RBP10.06□□□□□ -0.8
PDLIM5-207ENST00000503974 STAMBPO95630 424 aa10.06□□□□□ -0.8
PDLIM5-207ENST00000503974 WEE1P30291 646 aa10.06□□□□□ -0.8
PDLIM5-207ENST00000503974 HOXD13P35453 343 aa10.06□□□□□ -0.8
PDLIM5-207ENST00000503974 OCRLQ01968 901 aa10.06□□□□□ -0.8
PDLIM5-207ENST00000503974 PTPN11Q06124 597 aaPredicted RBP10.06□□□□□ -0.8
PDLIM5-207ENST00000503974 CKAP4Q07065 602 aaKnown RBP10.06□□□□□ -0.8
PDLIM5-207ENST00000503974 MTF1Q14872 753 aa10.06□□□□□ -0.8
PDLIM5-207ENST00000503974 SNX17Q15036 470 aa10.06□□□□□ -0.8
PDLIM5-207ENST00000503974 TARBP2Q15633 366 aaKnown RBP10.06□□□□□ -0.8
PDLIM5-207ENST00000503974 ODF2Q5BJF6 829 aa10.06□□□□□ -0.8
PDLIM5-207ENST00000503974 TJAP1Q5JTD0 557 aa10.06□□□□□ -0.8
PDLIM5-207ENST00000503974 C1orf53Q5VUE5 145 aa10.06□□□□□ -0.8
PDLIM5-207ENST00000503974 ALKBH2Q6NS38 261 aa10.06□□□□□ -0.8
PDLIM5-207ENST00000503974 POTEGQ6S5H5 508 aa10.06□□□□□ -0.8
PDLIM5-207ENST00000503974 ANO5Q75V66 913 aa10.06□□□□□ -0.8
PDLIM5-207ENST00000503974 MARK2Q7KZI7 788 aaKnown RBP10.06□□□□□ -0.8
PDLIM5-207ENST00000503974 CLVS1Q8IUQ0 354 aaPredicted RBP10.06□□□□□ -0.8
PDLIM5-207ENST00000503974 TMTC1Q8IUR5 882 aa10.06□□□□□ -0.8
PDLIM5-207ENST00000503974 HACE1Q8IYU2 909 aa10.06□□□□□ -0.8
PDLIM5-207ENST00000503974 FMR1NBQ8N0W7 255 aaPredicted RBP10.06□□□□□ -0.8
PDLIM5-207ENST00000503974 RIBC1Q8N443 379 aaPredicted RBP10.06□□□□□ -0.8
PDLIM5-207ENST00000503974 PLEKHO2Q8TD55 490 aa10.06□□□□□ -0.8
PDLIM5-207ENST00000503974 CDKL2Q92772 493 aa10.06□□□□□ -0.8
PDLIM5-207ENST00000503974 GLT1D1Q96MS3 346 aa10.06□□□□□ -0.8
PDLIM5-207ENST00000503974 RNPEPQ9H4A4 650 aa10.06□□□□□ -0.8
PDLIM5-207ENST00000503974 EPB41L1Q9H4G0 881 aa10.06□□□□□ -0.8
PDLIM5-207ENST00000503974 ANKEF1Q9NU02 776 aa10.06□□□□□ -0.8
PDLIM5-207ENST00000503974 DBR1Q9UK59 544 aaKnown RBP10.06□□□□□ -0.8
PDLIM5-207ENST00000503974 A0A087X0B3 334 aa10.05□□□□□ -0.8
PDLIM5-207ENST00000503974 SMIM31A0A1B0GVY4 71 aa10.05□□□□□ -0.8
PDLIM5-207ENST00000503974 SH3PXD2BA1X283 911 aa10.05□□□□□ -0.8
PDLIM5-207ENST00000503974 ZBTB42B2RXF5 422 aa10.05□□□□□ -0.8
PDLIM5-207ENST00000503974 NCK2O43639 380 aa10.05□□□□□ -0.8
PDLIM5-207ENST00000503974 HBP1O60381 514 aa10.05□□□□□ -0.8
PDLIM5-207ENST00000503974 TSPAN9O75954 239 aa10.05□□□□□ -0.8
PDLIM5-207ENST00000503974 LYNP07948 512 aa10.05□□□□□ -0.8
PDLIM5-207ENST00000503974 ENO2P09104 434 aaPredicted RBP10.05□□□□□ -0.8
PDLIM5-207ENST00000503974 PCNAP12004 261 aa10.05□□□□□ -0.8
PDLIM5-207ENST00000503974 ATP1A3P13637 1013 aa10.05□□□□□ -0.8
PDLIM5-207ENST00000503974 KRT83P78385 493 aa10.05□□□□□ -0.8
PDLIM5-207ENST00000503974 ADAM17P78536 824 aa10.05□□□□□ -0.8
PDLIM5-207ENST00000503974 DPCR1Q3MIW9 517 aa10.05□□□□□ -0.8
PDLIM5-207ENST00000503974 NAALADL2Q58DX5 795 aa10.05□□□□□ -0.8
PDLIM5-207ENST00000503974 NDUFAF5Q5TEU4 345 aa10.05□□□□□ -0.8
PDLIM5-207ENST00000503974 NEK5Q6P3R8 708 aa10.05□□□□□ -0.8
PDLIM5-207ENST00000503974 NFRKBQ6P4R8 1299 aa10.05□□□□□ -0.8
PDLIM5-207ENST00000503974 KCNK18Q7Z418 384 aa10.05□□□□□ -0.8
PDLIM5-207ENST00000503974 CAND1Q86VP6 1230 aaKnown RBP10.05□□□□□ -0.8
PDLIM5-207ENST00000503974 TPH2Q8IWU9 490 aa10.05□□□□□ -0.8
PDLIM5-207ENST00000503974 ALDH16A1Q8IZ83 802 aa10.05□□□□□ -0.8
PDLIM5-207ENST00000503974 ARHGAP24Q8N264 748 aa10.05□□□□□ -0.8
PDLIM5-207ENST00000503974 ENGASEQ8NFI3 743 aa10.05□□□□□ -0.8
PDLIM5-207ENST00000503974 EXD1Q8NHP7 514 aa10.05□□□□□ -0.8
PDLIM5-207ENST00000503974 ATL1Q8WXF7 558 aa10.05□□□□□ -0.8
PDLIM5-207ENST00000503974 HERVK_113Q902F9 699 aa10.05□□□□□ -0.8
PDLIM5-207ENST00000503974 MRPS27Q92552 414 aaKnown RBP10.05□□□□□ -0.8
PDLIM5-207ENST00000503974 CALML4Q96GE6 196 aa10.05□□□□□ -0.8
PDLIM5-207ENST00000503974 DNAJC1Q96KC8 554 aaKnown RBP10.05□□□□□ -0.8
PDLIM5-207ENST00000503974 NACC1Q96RE7 527 aa10.05□□□□□ -0.8
PDLIM5-207ENST00000503974 BLOC1S4Q9NUP1 217 aa10.05□□□□□ -0.8
PDLIM5-207ENST00000503974 SELENONQ9NZV5 590 aa10.05□□□□□ -0.8
PDLIM5-207ENST00000503974 HACD3Q9P035 362 aa10.05□□□□□ -0.8
PDLIM5-207ENST00000503974 STK38LQ9Y2H1 464 aa10.05□□□□□ -0.8
PDLIM5-207ENST00000503974 CENPFP49454 3210 aa10.05□□□□□ -0.8
PDLIM5-207ENST00000503974 C2orf81A6NN90 581 aa10.05□□□□□ -0.8
PDLIM5-207ENST00000503974 ACSL4O60488 711 aa10.05□□□□□ -0.8
PDLIM5-207ENST00000503974 UBOX5O94941 541 aa10.05□□□□□ -0.8
PDLIM5-207ENST00000503974 PFKFB1P16118 471 aa10.05□□□□□ -0.8
PDLIM5-207ENST00000503974 PLCG1P19174 1290 aa10.05□□□□□ -0.8
PDLIM5-207ENST00000503974 IL32P24001 234 aa10.05□□□□□ -0.8
PDLIM5-207ENST00000503974 MARK3P27448 753 aa10.05□□□□□ -0.8
PDLIM5-207ENST00000503974 TNFRSF8P28908 595 aa10.05□□□□□ -0.8
PDLIM5-207ENST00000503974 CASP14P31944 242 aa10.05□□□□□ -0.8
PDLIM5-207ENST00000503974 YWHABP31946 246 aaKnown RBP10.05□□□□□ -0.8
PDLIM5-207ENST00000503974 COPS2P61201 443 aa10.05□□□□□ -0.8
PDLIM5-207ENST00000503974 PSMC6P62333 389 aa10.05□□□□□ -0.8
PDLIM5-207ENST00000503974 GNA13Q14344 377 aa10.05□□□□□ -0.8
PDLIM5-207ENST00000503974 UNC5DQ6UXZ4 953 aa10.05□□□□□ -0.8
PDLIM5-207ENST00000503974 NELFBQ8WX92 580 aa10.05□□□□□ -0.8
PDLIM5-207ENST00000503974 ACAP3Q96P50 834 aa10.05□□□□□ -0.8
PDLIM5-207ENST00000503974 NEURL2Q9BR09 285 aa10.05□□□□□ -0.8
PDLIM5-207ENST00000503974 SERHL2Q9H4I8 314 aa10.05□□□□□ -0.8
PDLIM5-207ENST00000503974 CCSER2Q9H7U1 834 aa10.05□□□□□ -0.8
PDLIM5-207ENST00000503974 TMBIM4Q9HC24 238 aa10.05□□□□□ -0.8
PDLIM5-207ENST00000503974 C12orf4Q9NQ89 552 aa10.05□□□□□ -0.8
PDLIM5-207ENST00000503974 STARD7Q9NQZ5 370 aa10.05□□□□□ -0.8
PDLIM5-207ENST00000503974 NMRK1Q9NWW6 199 aa10.05□□□□□ -0.8
PDLIM5-207ENST00000503974 STK17AQ9UEE5 414 aa10.05□□□□□ -0.8
PDLIM5-207ENST00000503974 KIAA1024Q9UPX6 916 aa10.05□□□□□ -0.8
PDLIM5-207ENST00000503974 FUOMA2VDF0 154 aa10.04□□□□□ -0.8
PDLIM5-207ENST00000503974 RNASEH2AO75792 299 aaKnown RBP10.04□□□□□ -0.8
PDLIM5-207ENST00000503974 DDHD2O94830 711 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms