RNA–Protein interactions for RNA: ENST00000503682.5

COPS4-202, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 5 BASIC

Gene COPS4, Length 1,702 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-202ENST00000503682 ZCWPW2Q504Y3 356 aa10.86□□□□□ -0.67
COPS4-202ENST00000503682 NAIF1Q69YI7 327 aaPredicted RBP10.86□□□□□ -0.67
COPS4-202ENST00000503682 PAQR9Q6ZVX9 377 aa10.86□□□□□ -0.67
COPS4-202ENST00000503682 MON1AQ86VX9 555 aa10.86□□□□□ -0.67
COPS4-202ENST00000503682 FAM186BQ8IYM0 893 aa10.86□□□□□ -0.67
COPS4-202ENST00000503682 TMC2Q8TDI7 906 aa10.86□□□□□ -0.67
COPS4-202ENST00000503682 TAS1R2Q8TE23 839 aa10.86□□□□□ -0.67
COPS4-202ENST00000503682 E2F7Q96AV8 911 aa10.86□□□□□ -0.67
COPS4-202ENST00000503682 CLDN23Q96B33 292 aa10.86□□□□□ -0.67
COPS4-202ENST00000503682 MYRFLQ96LU7 910 aa10.86□□□□□ -0.67
COPS4-202ENST00000503682 IRF2BPLQ9H1B7 796 aa10.86□□□□□ -0.67
COPS4-202ENST00000503682 EBF3Q9H4W6 596 aa10.86□□□□□ -0.67
COPS4-202ENST00000503682 APOBEC3GQ9HC16 384 aaKnown RBP10.86□□□□□ -0.67
COPS4-202ENST00000503682 TDP1Q9NUW8 608 aa10.86□□□□□ -0.67
COPS4-202ENST00000503682 WDR70Q9NW82 654 aa10.86□□□□□ -0.67
COPS4-202ENST00000503682 PCDHA5Q9Y5H7 936 aa10.86□□□□□ -0.67
COPS4-202ENST00000503682 RIF1Q5UIP0 2472 aaKnown RBP10.85□□□□□ -0.67
COPS4-202ENST00000503682 PRR23AA6NEV1 266 aa10.85□□□□□ -0.67
COPS4-202ENST00000503682 LAMTOR5O43504 91 aa10.85□□□□□ -0.67
COPS4-202ENST00000503682 ABL1P00519 1130 aa10.85□□□□□ -0.67
COPS4-202ENST00000503682 CKMP06732 381 aa10.85□□□□□ -0.67
COPS4-202ENST00000503682 CCDC130P13994 396 aa10.85□□□□□ -0.67
COPS4-202ENST00000503682 ANXA13P27216 316 aa10.85□□□□□ -0.67
COPS4-202ENST00000503682 ZXDBP98169 803 aa10.85□□□□□ -0.67
COPS4-202ENST00000503682 CSTF1Q05048 431 aaKnown RBP10.85□□□□□ -0.67
COPS4-202ENST00000503682 PON2Q15165 354 aa10.85□□□□□ -0.67
COPS4-202ENST00000503682 ARHGAP29Q52LW3 1261 aa10.85□□□□□ -0.67
COPS4-202ENST00000503682 VSTM1Q6UX27 236 aa10.85□□□□□ -0.67
COPS4-202ENST00000503682 Q6ZS52 159 aa10.85□□□□□ -0.67
COPS4-202ENST00000503682 DENND5BQ6ZUT9 1274 aa10.85□□□□□ -0.67
COPS4-202ENST00000503682 CELF5Q8N6W0 485 aaKnown RBP10.85□□□□□ -0.67
COPS4-202ENST00000503682 C12orf29Q8N999 325 aa10.85□□□□□ -0.67
COPS4-202ENST00000503682 TMEM174Q8WUU8 243 aa10.85□□□□□ -0.67
COPS4-202ENST00000503682 SLC39A7Q92504 469 aa10.85□□□□□ -0.67
COPS4-202ENST00000503682 TRMT2BQ96GJ1 504 aaKnown RBP10.85□□□□□ -0.67
COPS4-202ENST00000503682 TWNKQ96RR1 684 aa10.85□□□□□ -0.67
COPS4-202ENST00000503682 MED10Q9BTT4 135 aa10.85□□□□□ -0.67
COPS4-202ENST00000503682 VRTNQ9H8Y1 702 aa10.85□□□□□ -0.67
COPS4-202ENST00000503682 TRPV5Q9NQA5 729 aa10.85□□□□□ -0.67
COPS4-202ENST00000503682 HPS4Q9NQG7 708 aa10.85□□□□□ -0.67
COPS4-202ENST00000503682 C2orf42Q9NWW7 574 aa10.85□□□□□ -0.67
COPS4-202ENST00000503682 PTPRZ1P23471 2315 aaPredicted RBP10.85□□□□□ -0.67
COPS4-202ENST00000503682 PROB1E7EW31 1015 aa10.84□□□□□ -0.67
COPS4-202ENST00000503682 SPECC1L-ADORA2AF8WAN1 911 aa10.84□□□□□ -0.67
COPS4-202ENST00000503682 MAN2B1O00754 1011 aa10.84□□□□□ -0.67
COPS4-202ENST00000503682 BEST1O76090 585 aa10.84□□□□□ -0.67
COPS4-202ENST00000503682 ASS1P00966 412 aaKnown RBP10.84□□□□□ -0.67
COPS4-202ENST00000503682 CHRNB1P11230 501 aa10.84□□□□□ -0.67
COPS4-202ENST00000503682 CTHP32929 405 aa10.84□□□□□ -0.67
COPS4-202ENST00000503682 ASPAP45381 313 aa10.84□□□□□ -0.67
COPS4-202ENST00000503682 NDST1P52848 882 aa10.84□□□□□ -0.67
COPS4-202ENST00000503682 AP3M2P53677 418 aa10.84□□□□□ -0.67
COPS4-202ENST00000503682 FAM160A1Q05DH4 1040 aa10.84□□□□□ -0.67
COPS4-202ENST00000503682 MAPRE1Q15691 268 aaKnown RBP10.84□□□□□ -0.67
COPS4-202ENST00000503682 SGSM1Q2NKQ1 1148 aa10.84□□□□□ -0.67
COPS4-202ENST00000503682 SEMA4DQ92854 862 aa10.84□□□□□ -0.67
COPS4-202ENST00000503682 NKD2Q969F2 451 aaPredicted RBP10.84□□□□□ -0.67
COPS4-202ENST00000503682 CHFRQ96EP1 664 aa10.84□□□□□ -0.67
COPS4-202ENST00000503682 NELL2Q99435 816 aa10.84□□□□□ -0.67
COPS4-202ENST00000503682 FAM83CQ9BQN1 747 aa10.84□□□□□ -0.67
COPS4-202ENST00000503682 OSBPL6Q9BZF3 934 aa10.84□□□□□ -0.67
COPS4-202ENST00000503682 RNF38Q9H0F5 515 aa10.84□□□□□ -0.67
COPS4-202ENST00000503682 FAM49BQ9NUQ9 324 aa10.84□□□□□ -0.67
COPS4-202ENST00000503682 GCNT4Q9P109 453 aa10.84□□□□□ -0.67
COPS4-202ENST00000503682 UXTQ9UBK9 157 aaPredicted RBP10.84□□□□□ -0.67
COPS4-202ENST00000503682 MRPS17Q9Y2R5 130 aaKnown RBP10.84□□□□□ -0.67
COPS4-202ENST00000503682 WNT6Q9Y6F9 365 aa10.84□□□□□ -0.67
COPS4-202ENST00000503682 FAM186AA6NE01 2351 aa10.84□□□□□ -0.67
COPS4-202ENST00000503682 TRAV19A0A0A6YYK7 116 aa10.84□□□□□ -0.67
COPS4-202ENST00000503682 IKBKBO14920 756 aa10.84□□□□□ -0.67
COPS4-202ENST00000503682 NCAM2O15394 837 aa10.84□□□□□ -0.67
COPS4-202ENST00000503682 KIF20AO95235 890 aa10.84□□□□□ -0.67
COPS4-202ENST00000503682 KRT13P13646 458 aa10.84□□□□□ -0.67
COPS4-202ENST00000503682 HDCP19113 662 aa10.84□□□□□ -0.67
COPS4-202ENST00000503682 CD58P19256 250 aa10.84□□□□□ -0.67
COPS4-202ENST00000503682 WEE1P30291 646 aa10.84□□□□□ -0.67
COPS4-202ENST00000503682 PSMC2P35998 433 aaKnown RBP10.84□□□□□ -0.67
COPS4-202ENST00000503682 TAF10Q12962 218 aa10.84□□□□□ -0.67
COPS4-202ENST00000503682 NFIL3Q16649 462 aa10.84□□□□□ -0.67
COPS4-202ENST00000503682 ZNF658Q5TYW1 1059 aaPredicted RBP10.84□□□□□ -0.67
COPS4-202ENST00000503682 ANKRD40Q6AI12 368 aa10.84□□□□□ -0.67
COPS4-202ENST00000503682 FAM35AQ86V20 835 aa10.84□□□□□ -0.67
COPS4-202ENST00000503682 FUKQ8N0W3 1084 aa10.84□□□□□ -0.67
COPS4-202ENST00000503682 SCAMP5Q8TAC9 235 aa10.84□□□□□ -0.67
COPS4-202ENST00000503682 SMARCE1Q969G3 411 aa10.84□□□□□ -0.67
COPS4-202ENST00000503682 JAKMIP2Q96AA8 810 aa10.84□□□□□ -0.67
COPS4-202ENST00000503682 SPATA17Q96L03 361 aa10.84□□□□□ -0.67
COPS4-202ENST00000503682 FBRSL1Q9HCM7 1045 aaKnown RBP10.84□□□□□ -0.67
COPS4-202ENST00000503682 POLR3BQ9NW08 1133 aaPredicted RBP10.84□□□□□ -0.67
COPS4-202ENST00000503682 SMPD4Q9NXE4 827 aa10.84□□□□□ -0.67
COPS4-202ENST00000503682 OBP2AQ9NY56 170 aa10.84□□□□□ -0.67
COPS4-202ENST00000503682 CHORDC1Q9UHD1 332 aaPredicted RBP10.84□□□□□ -0.67
COPS4-202ENST00000503682 TRIM66O15016 1216 aa10.83□□□□□ -0.68
COPS4-202ENST00000503682 C7P10643 843 aa10.83□□□□□ -0.68
COPS4-202ENST00000503682 DDX6P26196 483 aaKnown RBP eCLIP10.83□□□□□ -0.68
COPS4-202ENST00000503682 RPL13P26373 211 aaKnown RBP10.83□□□□□ -0.68
COPS4-202ENST00000503682 ADORA2BP29275 332 aa10.83□□□□□ -0.68
COPS4-202ENST00000503682 PGFP49763 221 aa10.83□□□□□ -0.68
COPS4-202ENST00000503682 NOP14P78316 857 aaKnown RBP10.83□□□□□ -0.68
COPS4-202ENST00000503682 SATB1Q01826 763 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms