RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 NCOA4Q13772 614 aa17.33■□□□□ 0.36
SCLT1-204ENST00000503215 LRRC32Q14392 662 aa17.33■□□□□ 0.36
SCLT1-204ENST00000503215 ZNF268Q14587 947 aaPredicted RBP17.33■□□□□ 0.36
SCLT1-204ENST00000503215 MAPRE1Q15691 268 aaKnown RBP17.33■□□□□ 0.36
SCLT1-204ENST00000503215 ZNF77Q15935 545 aa17.33■□□□□ 0.36
SCLT1-204ENST00000503215 LPAL2Q16609 132 aa17.33■□□□□ 0.36
SCLT1-204ENST00000503215 SCARA5Q6ZMJ2 495 aa17.33■□□□□ 0.36
SCLT1-204ENST00000503215 SYAP1Q96A49 352 aaPredicted RBP17.33■□□□□ 0.36
SCLT1-204ENST00000503215 LINC00597Q9H2U6 94 aa17.33■□□□□ 0.36
SCLT1-204ENST00000503215 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.33■□□□□ 0.362e-6■■■■■ 94.8
SCLT1-204ENST00000503215 ANAPC1Q9H1A4 1944 aa17.33■□□□□ 0.36
SCLT1-204ENST00000503215 PDXKO00764 312 aa17.32■□□□□ 0.36
SCLT1-204ENST00000503215 CKMP06732 381 aa17.32■□□□□ 0.36
SCLT1-204ENST00000503215 FAM163BP0C2L3 166 aa17.32■□□□□ 0.36
SCLT1-204ENST00000503215 USP17L7P0C7H9 530 aa17.32■□□□□ 0.36
SCLT1-204ENST00000503215 HDCP19113 662 aa17.32■□□□□ 0.36
SCLT1-204ENST00000503215 ATICP31939 592 aa17.32■□□□□ 0.36
SCLT1-204ENST00000503215 FAM160A1Q05DH4 1040 aa17.32■□□□□ 0.36
SCLT1-204ENST00000503215 DPYDQ12882 1025 aa17.32■□□□□ 0.36
SCLT1-204ENST00000503215 ORC1Q13415 861 aa17.32■□□□□ 0.36
SCLT1-204ENST00000503215 MTF1Q14872 753 aa17.32■□□□□ 0.36
SCLT1-204ENST00000503215 ZNF699Q32M78 642 aa17.32■□□□□ 0.36
SCLT1-204ENST00000503215 DGKKQ5KSL6 1271 aa17.32■□□□□ 0.36
SCLT1-204ENST00000503215 CEP135Q66GS9 1140 aa17.32■□□□□ 0.36
SCLT1-204ENST00000503215 HEATR6Q6AI08 1181 aaKnown RBP17.32■□□□□ 0.36
SCLT1-204ENST00000503215 CC2D1AQ6P1N0 951 aaPredicted RBP17.32■□□□□ 0.36
SCLT1-204ENST00000503215 C1orf228Q6PIY5 440 aa17.32■□□□□ 0.36
SCLT1-204ENST00000503215 DENND5BQ6ZUT9 1274 aa17.32■□□□□ 0.36
SCLT1-204ENST00000503215 PAQR9Q6ZVX9 377 aa17.32■□□□□ 0.36
SCLT1-204ENST00000503215 B3GALNT2Q8NCR0 500 aa17.32■□□□□ 0.36
SCLT1-204ENST00000503215 SH3RF2Q8TEC5 729 aa17.32■□□□□ 0.36
SCLT1-204ENST00000503215 C8orf48Q96LL4 319 aa17.32■□□□□ 0.36
SCLT1-204ENST00000503215 IER2Q9BTL4 223 aa17.32■□□□□ 0.36
SCLT1-204ENST00000503215 RNF38Q9H0F5 515 aa17.32■□□□□ 0.36
SCLT1-204ENST00000503215 EPC1Q9H2F5 836 aa17.32■□□□□ 0.36
SCLT1-204ENST00000503215 VRTNQ9H8Y1 702 aa17.32■□□□□ 0.36
SCLT1-204ENST00000503215 KIF9Q9HAQ2 790 aa17.32■□□□□ 0.36
SCLT1-204ENST00000503215 SMG5Q9UPR3 1016 aaKnown RBP17.32■□□□□ 0.36
SCLT1-204ENST00000503215 PTPRDP23468 1912 aa17.32■□□□□ 0.36
SCLT1-204ENST00000503215 CEP250Q9BV73 2442 aa17.32■□□□□ 0.36
SCLT1-204ENST00000503215 ZNF840PA6NDX5 716 aa17.31■□□□□ 0.36
SCLT1-204ENST00000503215 SCAMP3O14828 347 aaKnown RBP17.31■□□□□ 0.36
SCLT1-204ENST00000503215 HRO43593 1189 aa17.31■□□□□ 0.36
SCLT1-204ENST00000503215 EGFP01133 1207 aa17.31■□□□□ 0.36
SCLT1-204ENST00000503215 GALK1P51570 392 aa17.31■□□□□ 0.36
SCLT1-204ENST00000503215 USP4Q13107 963 aa17.31■□□□□ 0.36
SCLT1-204ENST00000503215 TMEM196Q5HYL7 178 aa17.31■□□□□ 0.36
SCLT1-204ENST00000503215 SPOPLQ6IQ16 392 aa17.31■□□□□ 0.36
SCLT1-204ENST00000503215 KRBA2Q6ZNG9 492 aa17.31■□□□□ 0.36
SCLT1-204ENST00000503215 SV2AQ7L0J3 742 aa17.31■□□□□ 0.36
SCLT1-204ENST00000503215 TMEM174Q8WUU8 243 aa17.31■□□□□ 0.36
SCLT1-204ENST00000503215 RMDN1Q96DB5 314 aa17.31■□□□□ 0.36
SCLT1-204ENST00000503215 KCNK16Q96T55 309 aa17.31■□□□□ 0.36
SCLT1-204ENST00000503215 TTLL2Q9BWV7 592 aa17.31■□□□□ 0.36
SCLT1-204ENST00000503215 FAM126AQ9BYI3 521 aaPredicted RBP17.31■□□□□ 0.36
SCLT1-204ENST00000503215 DUS2Q9NX74 493 aaKnown RBP17.31■□□□□ 0.36
SCLT1-204ENST00000503215 A0A1W2PQ27 194 aa17.3■□□□□ 0.36
SCLT1-204ENST00000503215 A0A1W2PQ64 194 aa17.3■□□□□ 0.36
SCLT1-204ENST00000503215 A0A1W2PQD8 194 aa17.3■□□□□ 0.36
SCLT1-204ENST00000503215 TRDMT1O14717 391 aaKnown RBP17.3■□□□□ 0.36
SCLT1-204ENST00000503215 TRIM66O15016 1216 aa17.3■□□□□ 0.36
SCLT1-204ENST00000503215 RHOBTB3O94955 611 aa17.3■□□□□ 0.36
SCLT1-204ENST00000503215 ANXA13P27216 316 aa17.3■□□□□ 0.36
SCLT1-204ENST00000503215 GJA4P35212 333 aa17.3■□□□□ 0.36
SCLT1-204ENST00000503215 IFRD2Q12894 506 aaPredicted RBP17.3■□□□□ 0.36
SCLT1-204ENST00000503215 TAF10Q12962 218 aa17.3■□□□□ 0.36
SCLT1-204ENST00000503215 PDGFRLQ15198 375 aa17.3■□□□□ 0.36
SCLT1-204ENST00000503215 ZACNQ401N2 412 aa17.3■□□□□ 0.36
SCLT1-204ENST00000503215 ZNF667Q5HYK9 610 aa17.3■□□□□ 0.36
SCLT1-204ENST00000503215 ACOT1Q86TX2 421 aa17.3■□□□□ 0.36
SCLT1-204ENST00000503215 TMC2Q8TDI7 906 aa17.3■□□□□ 0.36
SCLT1-204ENST00000503215 OSCP1Q8WVF1 389 aa17.3■□□□□ 0.36
SCLT1-204ENST00000503215 EZH1Q92800 747 aaPredicted RBP17.3■□□□□ 0.36
SCLT1-204ENST00000503215 ECT2Q9H8V3 914 aa17.3■□□□□ 0.36
SCLT1-204ENST00000503215 TRPM5Q9NZQ8 1165 aa17.3■□□□□ 0.36
SCLT1-204ENST00000503215 HMGXB4Q9UGU5 601 aa17.3■□□□□ 0.36
SCLT1-204ENST00000503215 ANTXRLA6NF34 631 aa17.29■□□□□ 0.36
SCLT1-204ENST00000503215 CLSTN1O94985 981 aa17.29■□□□□ 0.36
SCLT1-204ENST00000503215 ZNF202O95125 648 aa17.29■□□□□ 0.36
SCLT1-204ENST00000503215 ABL1P00519 1130 aa17.29■□□□□ 0.36
SCLT1-204ENST00000503215 MYL1P05976 194 aa17.29■□□□□ 0.36
SCLT1-204ENST00000503215 TRIM49P0CI25 452 aa17.29■□□□□ 0.36
SCLT1-204ENST00000503215 TRIM49CP0CI26 452 aa17.29■□□□□ 0.36
SCLT1-204ENST00000503215 ID4P47928 161 aa17.29■□□□□ 0.36
SCLT1-204ENST00000503215 PXNP49023 591 aaPredicted RBP17.29■□□□□ 0.36
SCLT1-204ENST00000503215 AP3M2P53677 418 aa17.29■□□□□ 0.36
SCLT1-204ENST00000503215 NOP14P78316 857 aaKnown RBP17.29■□□□□ 0.36
SCLT1-204ENST00000503215 KCNB1Q14721 858 aa17.29■□□□□ 0.36
SCLT1-204ENST00000503215 EML3Q32P44 896 aa17.29■□□□□ 0.36
SCLT1-204ENST00000503215 SCAMP5Q8TAC9 235 aa17.29■□□□□ 0.36
SCLT1-204ENST00000503215 ELOVL4Q9GZR5 314 aa17.29■□□□□ 0.36
SCLT1-204ENST00000503215 SCAND2PQ9GZW5 306 aaPredicted RBP17.29■□□□□ 0.36
SCLT1-204ENST00000503215 SMPD4Q9NXE4 827 aa17.29■□□□□ 0.36
SCLT1-204ENST00000503215 NCDNQ9UBB6 729 aa17.29■□□□□ 0.36
SCLT1-204ENST00000503215 ARHGAP26Q9UNA1 814 aa17.29■□□□□ 0.36
SCLT1-204ENST00000503215 TRAF3IP3Q9Y228 551 aa17.29■□□□□ 0.36
SCLT1-204ENST00000503215 SDK1Q7Z5N4 2213 aa17.29■□□□□ 0.36
SCLT1-204ENST00000503215 LEFTY2O00292 366 aa17.28■□□□□ 0.36
SCLT1-204ENST00000503215 AKAP3O75969 853 aa17.28■□□□□ 0.36
SCLT1-204ENST00000503215 PAPSS2O95340 614 aaPredicted RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms