RNA–Protein interactions for RNA: ENST00000502848.5

NR1I3-216, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 914 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-216ENST00000502848 RHOT1Q8IXI2 618 aa9.55□□□□□ -0.88
NR1I3-216ENST00000502848 KATNAL2Q8IYT4 538 aa9.55□□□□□ -0.88
NR1I3-216ENST00000502848 RNF168Q8IYW5 571 aaPredicted RBP9.55□□□□□ -0.88
NR1I3-216ENST00000502848 TMEM130Q8N3G9 435 aa9.55□□□□□ -0.88
NR1I3-216ENST00000502848 RABGGTAQ92696 567 aa9.55□□□□□ -0.88
NR1I3-216ENST00000502848 RNF25Q96BH1 459 aaPredicted RBP9.55□□□□□ -0.88
NR1I3-216ENST00000502848 MCEEQ96PE7 176 aa9.55□□□□□ -0.88
NR1I3-216ENST00000502848 RTP3Q9BQQ7 232 aa9.55□□□□□ -0.88
NR1I3-216ENST00000502848 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.55□□□□□ -0.88
NR1I3-216ENST00000502848 HTATIP2Q9BUP3 242 aa9.55□□□□□ -0.88
NR1I3-216ENST00000502848 ZCWPW1Q9H0M4 648 aa9.55□□□□□ -0.88
NR1I3-216ENST00000502848 MTIF3Q9H2K0 278 aaKnown RBP9.55□□□□□ -0.88
NR1I3-216ENST00000502848 DMAP1Q9NPF5 467 aaPredicted RBP9.55□□□□□ -0.88
NR1I3-216ENST00000502848 CRTAC1Q9NQ79 661 aa9.55□□□□□ -0.88
NR1I3-216ENST00000502848 CNGB3Q9NQW8 809 aa9.55□□□□□ -0.88
NR1I3-216ENST00000502848 DDX56Q9NY93 547 aaKnown RBP9.55□□□□□ -0.88
NR1I3-216ENST00000502848 TMEM59LQ9UK28 342 aa9.55□□□□□ -0.88
NR1I3-216ENST00000502848 MAFFQ9ULX9 164 aa9.55□□□□□ -0.88
NR1I3-216ENST00000502848 EFR3BQ9Y2G0 817 aa9.55□□□□□ -0.88
NR1I3-216ENST00000502848 CENPFP49454 3210 aa9.55□□□□□ -0.88
NR1I3-216ENST00000502848 C2CD4BA6NLJ0 364 aa9.54□□□□□ -0.88
NR1I3-216ENST00000502848 B4GALT3O60512 393 aa9.54□□□□□ -0.88
NR1I3-216ENST00000502848 HSF2BPO75031 334 aa9.54□□□□□ -0.88
NR1I3-216ENST00000502848 KRT7P08729 469 aa9.54□□□□□ -0.88
NR1I3-216ENST00000502848 CCDC130P13994 396 aa9.54□□□□□ -0.88
NR1I3-216ENST00000502848 CSF2RAP15509 400 aa9.54□□□□□ -0.88
NR1I3-216ENST00000502848 MCM3P25205 808 aa9.54□□□□□ -0.88
NR1I3-216ENST00000502848 TKTP29401 623 aaKnown RBP9.54□□□□□ -0.88
NR1I3-216ENST00000502848 BRCC3P46736 316 aa9.54□□□□□ -0.88
NR1I3-216ENST00000502848 SLC11A1P49279 550 aa9.54□□□□□ -0.88
NR1I3-216ENST00000502848 BCAR1P56945 870 aa9.54□□□□□ -0.88
NR1I3-216ENST00000502848 CREMQ03060 361 aa9.54□□□□□ -0.88
NR1I3-216ENST00000502848 FPGSQ05932 587 aa9.54□□□□□ -0.88
NR1I3-216ENST00000502848 FAM102AQ5T9C2 384 aaPredicted RBP9.54□□□□□ -0.88
NR1I3-216ENST00000502848 SEL1L2Q5TEA6 688 aa9.54□□□□□ -0.88
NR1I3-216ENST00000502848 CCDC70Q6NSX1 233 aa9.54□□□□□ -0.88
NR1I3-216ENST00000502848 FUT10Q6P4F1 479 aa9.54□□□□□ -0.88
NR1I3-216ENST00000502848 CLEC20AQ6ZU45 233 aa9.54□□□□□ -0.88
NR1I3-216ENST00000502848 PAQR9Q6ZVX9 377 aa9.54□□□□□ -0.88
NR1I3-216ENST00000502848 DNAAF5Q86Y56 855 aa9.54□□□□□ -0.88
NR1I3-216ENST00000502848 PSTKQ8IV42 348 aaKnown RBP9.54□□□□□ -0.88
NR1I3-216ENST00000502848 MMGT1Q8N4V1 131 aa9.54□□□□□ -0.88
NR1I3-216ENST00000502848 GPR161Q8N6U8 529 aaKnown RBP9.54□□□□□ -0.88
NR1I3-216ENST00000502848 EXD1Q8NHP7 514 aa9.54□□□□□ -0.88
NR1I3-216ENST00000502848 UBA3Q8TBC4 463 aa9.54□□□□□ -0.88
NR1I3-216ENST00000502848 PHOSPHO2Q8TCD6 241 aa9.54□□□□□ -0.88
NR1I3-216ENST00000502848 SPPL2BQ8TCT7 592 aa9.54□□□□□ -0.88
NR1I3-216ENST00000502848 PIK3R5Q8WYR1 880 aa9.54□□□□□ -0.88
NR1I3-216ENST00000502848 PCED1BQ96HM7 432 aa9.54□□□□□ -0.88
NR1I3-216ENST00000502848 RBM41Q96IZ5 413 aaKnown RBP9.54□□□□□ -0.88
NR1I3-216ENST00000502848 ZNF558Q96NG5 402 aa9.54□□□□□ -0.88
NR1I3-216ENST00000502848 RUNDC3BQ96NL0 473 aa9.54□□□□□ -0.88
NR1I3-216ENST00000502848 TBCBQ99426 244 aa9.54□□□□□ -0.88
NR1I3-216ENST00000502848 CARD6Q9BX69 1037 aa9.54□□□□□ -0.88
NR1I3-216ENST00000502848 B3GNT5Q9BYG0 378 aa9.54□□□□□ -0.88
NR1I3-216ENST00000502848 CWH43Q9H720 699 aa9.54□□□□□ -0.88
NR1I3-216ENST00000502848 PRDM16Q9HAZ2 1276 aa9.54□□□□□ -0.88
NR1I3-216ENST00000502848 AAASQ9NRG9 546 aa9.54□□□□□ -0.88
NR1I3-216ENST00000502848 KRT82Q9NSB4 513 aa9.54□□□□□ -0.88
NR1I3-216ENST00000502848 COMMD8Q9NX08 183 aa9.54□□□□□ -0.88
NR1I3-216ENST00000502848 MARCH5Q9NX47 278 aa9.54□□□□□ -0.88
NR1I3-216ENST00000502848 DNAJB4Q9UDY4 337 aa9.54□□□□□ -0.88
NR1I3-216ENST00000502848 BACE2Q9Y5Z0 518 aa9.54□□□□□ -0.88
NR1I3-216ENST00000502848 COL4A4P53420 1690 aaPredicted RBP9.53□□□□□ -0.88
NR1I3-216ENST00000502848 GOLGA6L10A0A0M3HER8 536 aa9.53□□□□□ -0.88
NR1I3-216ENST00000502848 TARSL2A2RTX5 802 aaKnown RBP9.53□□□□□ -0.88
NR1I3-216ENST00000502848 TRIM66O15016 1216 aa9.53□□□□□ -0.88
NR1I3-216ENST00000502848 PAPSS1O43252 624 aaPredicted RBP9.53□□□□□ -0.88
NR1I3-216ENST00000502848 NCK2O43639 380 aa9.53□□□□□ -0.88
NR1I3-216ENST00000502848 TBC1D4O60343 1298 aa9.53□□□□□ -0.88
NR1I3-216ENST00000502848 AP1G2O75843 785 aa9.53□□□□□ -0.88
NR1I3-216ENST00000502848 RNF8O76064 485 aa9.53□□□□□ -0.88
NR1I3-216ENST00000502848 ITGB1P05556 798 aa9.53□□□□□ -0.88
NR1I3-216ENST00000502848 GPD1P21695 349 aa9.53□□□□□ -0.88
NR1I3-216ENST00000502848 ADORA2BP29275 332 aa9.53□□□□□ -0.88
NR1I3-216ENST00000502848 RFC1P35251 1148 aaPredicted RBP9.53□□□□□ -0.88
NR1I3-216ENST00000502848 AIF1P55008 147 aa9.53□□□□□ -0.88
NR1I3-216ENST00000502848 RPL7AP62424 266 aaKnown RBP9.53□□□□□ -0.88
NR1I3-216ENST00000502848 HTRA4P83105 476 aaPredicted RBP9.53□□□□□ -0.88
NR1I3-216ENST00000502848 USP41Q3LFD5 358 aa9.53□□□□□ -0.88
NR1I3-216ENST00000502848 VARS2Q5ST30 1063 aaKnown RBP9.53□□□□□ -0.88
NR1I3-216ENST00000502848 KIAA0319Q5VV43 1072 aa9.53□□□□□ -0.88
NR1I3-216ENST00000502848 PM20D1Q6GTS8 502 aa9.53□□□□□ -0.88
NR1I3-216ENST00000502848 SLC8B1Q6J4K2 584 aa9.53□□□□□ -0.88
NR1I3-216ENST00000502848 FAM183BPQ6ZVS7 135 aa9.53□□□□□ -0.88
NR1I3-216ENST00000502848 STRADAQ7RTN6 431 aa9.53□□□□□ -0.88
NR1I3-216ENST00000502848 PIGZQ86VD9 579 aa9.53□□□□□ -0.88
NR1I3-216ENST00000502848 SIX6OS1Q8N1H7 587 aa9.53□□□□□ -0.88
NR1I3-216ENST00000502848 OR10T2Q8NGX3 314 aa9.53□□□□□ -0.88
NR1I3-216ENST00000502848 COG1Q8WTW3 980 aa9.53□□□□□ -0.88
NR1I3-216ENST00000502848 TEKT4Q8WW24 435 aa9.53□□□□□ -0.88
NR1I3-216ENST00000502848 UBXN4Q92575 508 aa9.53□□□□□ -0.88
NR1I3-216ENST00000502848 ALG3Q92685 438 aa9.53□□□□□ -0.88
NR1I3-216ENST00000502848 MYLPFQ96A32 169 aa9.53□□□□□ -0.88
NR1I3-216ENST00000502848 C8orf48Q96LL4 319 aa9.53□□□□□ -0.88
NR1I3-216ENST00000502848 RNPC3Q96LT9 517 aaKnown RBP9.53□□□□□ -0.88
NR1I3-216ENST00000502848 SLC9A7Q96T83 725 aa9.53□□□□□ -0.88
NR1I3-216ENST00000502848 MED10Q9BTT4 135 aa9.53□□□□□ -0.88
NR1I3-216ENST00000502848 TTPALQ9BTX7 342 aa9.53□□□□□ -0.88
NR1I3-216ENST00000502848 LRRC4Q9HBW1 653 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms