RNA–Protein interactions for RNA: ENST00000498837.1

SEC61A1-207, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2

Gene SEC61A1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-207ENST00000498837 USP46P62068 366 aa15.69■□□□□ 0.1
SEC61A1-207ENST00000498837 MESP2Q0VG99 397 aa15.69■□□□□ 0.1
SEC61A1-207ENST00000498837 SF3A1Q15459 793 aaKnown RBP15.69■□□□□ 0.1
SEC61A1-207ENST00000498837 CRY1Q16526 586 aa15.69■□□□□ 0.1
SEC61A1-207ENST00000498837 L1TD1Q5T7N2 865 aaKnown RBP15.69■□□□□ 0.1
SEC61A1-207ENST00000498837 LMBRD2Q68DH5 695 aaPredicted RBP15.69■□□□□ 0.1
SEC61A1-207ENST00000498837 C11orf74Q86VG3 221 aa15.69■□□□□ 0.1
SEC61A1-207ENST00000498837 TOP6BLQ8N6T0 577 aa15.69■□□□□ 0.1
SEC61A1-207ENST00000498837 FRMD1Q8N878 549 aa15.69■□□□□ 0.1
SEC61A1-207ENST00000498837 KDF1Q8NAX2 398 aaPredicted RBP15.69■□□□□ 0.1
SEC61A1-207ENST00000498837 CCDC26Q8TAB7 109 aa15.69■□□□□ 0.1
SEC61A1-207ENST00000498837 NOC3LQ8WTT2 800 aaKnown RBP15.69■□□□□ 0.1
SEC61A1-207ENST00000498837 RLN3Q8WXF3 142 aa15.69■□□□□ 0.1
SEC61A1-207ENST00000498837 DNAJC19Q96DA6 116 aa15.69■□□□□ 0.1
SEC61A1-207ENST00000498837 FUBP3Q96I24 572 aaKnown RBP eCLIP15.69■□□□□ 0.1
SEC61A1-207ENST00000498837 ACCSQ96QU6 501 aa15.69■□□□□ 0.1
SEC61A1-207ENST00000498837 SCNM1Q9BWG6 230 aa15.69■□□□□ 0.1
SEC61A1-207ENST00000498837 PCIF1Q9H4Z3 704 aa15.69■□□□□ 0.1
SEC61A1-207ENST00000498837 RBAKQ9NYW8 714 aaPredicted RBP15.69■□□□□ 0.1
SEC61A1-207ENST00000498837 MAGEC2Q9UBF1 373 aaPredicted RBP15.69■□□□□ 0.1
SEC61A1-207ENST00000498837 ITGA11Q9UKX5 1188 aa15.69■□□□□ 0.1
SEC61A1-207ENST00000498837 FASNP49327 2511 aaKnown RBP15.68■□□□□ 0.1
SEC61A1-207ENST00000498837 MYMKA6NI61 221 aa15.68■□□□□ 0.1
SEC61A1-207ENST00000498837 SCAMP3O14828 347 aaKnown RBP15.68■□□□□ 0.1
SEC61A1-207ENST00000498837 CD2BP2O95400 341 aaKnown RBP15.68■□□□□ 0.1
SEC61A1-207ENST00000498837 LDHAP00338 332 aaKnown RBP15.68■□□□□ 0.1
SEC61A1-207ENST00000498837 CYP17A1P05093 508 aa15.68■□□□□ 0.1
SEC61A1-207ENST00000498837 HOXB3P14651 431 aaPredicted RBP15.68■□□□□ 0.1
SEC61A1-207ENST00000498837 BDNFP23560 247 aa15.68■□□□□ 0.1
SEC61A1-207ENST00000498837 CASP5P51878 434 aa15.68■□□□□ 0.1
SEC61A1-207ENST00000498837 PSMC1P62191 440 aaKnown RBP15.68■□□□□ 0.1
SEC61A1-207ENST00000498837 RBP5P82980 135 aa15.68■□□□□ 0.1
SEC61A1-207ENST00000498837 FILIP1Q7Z7B0 1213 aa15.68■□□□□ 0.1
SEC61A1-207ENST00000498837 ADGRG2Q8IZP9 1017 aa15.68■□□□□ 0.1
SEC61A1-207ENST00000498837 DEFB124Q8NES8 71 aa15.68■□□□□ 0.1
SEC61A1-207ENST00000498837 OLIG1Q8TAK6 271 aa15.68■□□□□ 0.1
SEC61A1-207ENST00000498837 SPATA18Q8TC71 538 aa15.68■□□□□ 0.1
SEC61A1-207ENST00000498837 KBTBD7Q8WVZ9 684 aa15.68■□□□□ 0.1
SEC61A1-207ENST00000498837 SPATA17Q96L03 361 aa15.68■□□□□ 0.1
SEC61A1-207ENST00000498837 SYT15Q9BQS2 421 aa15.68■□□□□ 0.1
SEC61A1-207ENST00000498837 CBWD1Q9BRT8 395 aa15.68■□□□□ 0.1
SEC61A1-207ENST00000498837 FGFBP2Q9BYJ0 223 aa15.68■□□□□ 0.1
SEC61A1-207ENST00000498837 ADAM33Q9BZ11 813 aa15.68■□□□□ 0.1
SEC61A1-207ENST00000498837 MTMR12Q9C0I1 747 aa15.68■□□□□ 0.1
SEC61A1-207ENST00000498837 RNF38Q9H0F5 515 aa15.68■□□□□ 0.1
SEC61A1-207ENST00000498837 CRTAC1Q9NQ79 661 aa15.68■□□□□ 0.1
SEC61A1-207ENST00000498837 EXOC7Q9UPT5 735 aa15.68■□□□□ 0.1
SEC61A1-207ENST00000498837 NBEAQ8NFP9 2946 aa15.68■□□□□ 0.1
SEC61A1-207ENST00000498837 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.67■□□□□ 0.1
SEC61A1-207ENST00000498837 GCNT3O95395 438 aa15.67■□□□□ 0.1
SEC61A1-207ENST00000498837 BMP15O95972 392 aa15.67■□□□□ 0.1
SEC61A1-207ENST00000498837 PDGFRBP09619 1106 aa15.67■□□□□ 0.1
SEC61A1-207ENST00000498837 TMEM191BP0C7N4 346 aa15.67■□□□□ 0.1
SEC61A1-207ENST00000498837 CHRM1P11229 460 aaPredicted RBP15.67■□□□□ 0.1
SEC61A1-207ENST00000498837 GARTP22102 1010 aa15.67■□□□□ 0.1
SEC61A1-207ENST00000498837 TIE1P35590 1138 aa15.67■□□□□ 0.1
SEC61A1-207ENST00000498837 GRIK1P39086 918 aa15.67■□□□□ 0.1
SEC61A1-207ENST00000498837 MRPS21P82921 87 aaKnown RBP15.67■□□□□ 0.1
SEC61A1-207ENST00000498837 EMC10Q5UCC4 262 aa15.67■□□□□ 0.1
SEC61A1-207ENST00000498837 C4orf50Q6ZRC1 276 aa15.67■□□□□ 0.1
SEC61A1-207ENST00000498837 ARMCX6Q7L4S7 300 aa15.67■□□□□ 0.1
SEC61A1-207ENST00000498837 LIMS2Q7Z4I7 341 aa15.67■□□□□ 0.1
SEC61A1-207ENST00000498837 TMEFF1Q8IYR6 380 aa15.67■□□□□ 0.1
SEC61A1-207ENST00000498837 ALLCQ8N6M5 410 aa15.67■□□□□ 0.1
SEC61A1-207ENST00000498837 IL17RCQ8NAC3 791 aa15.67■□□□□ 0.1
SEC61A1-207ENST00000498837 TXNDC5Q8NBS9 432 aaKnown RBP15.67■□□□□ 0.1
SEC61A1-207ENST00000498837 GATA6Q92908 595 aa15.67■□□□□ 0.1
SEC61A1-207ENST00000498837 MYLPFQ96A32 169 aa15.67■□□□□ 0.1
SEC61A1-207ENST00000498837 FNBP1Q96RU3 617 aa15.67■□□□□ 0.1
SEC61A1-207ENST00000498837 ZDHHC4Q9NPG8 344 aa15.67■□□□□ 0.1
SEC61A1-207ENST00000498837 TMEM74BQ9NUR3 256 aa15.67■□□□□ 0.1
SEC61A1-207ENST00000498837 TRPM5Q9NZQ8 1165 aa15.67■□□□□ 0.1
SEC61A1-207ENST00000498837 SEL1LQ9UBV2 794 aa15.67■□□□□ 0.1
SEC61A1-207ENST00000498837 CIZ1Q9ULV3 898 aaPredicted RBP15.67■□□□□ 0.1
SEC61A1-207ENST00000498837 ANKRD11Q6UB99 2663 aaPredicted RBP15.67■□□□□ 0.1
SEC61A1-207ENST00000498837 PTPRJQ12913 1337 aa15.67■□□□□ 0.1
SEC61A1-207ENST00000498837 SGK1O00141 431 aa15.66■□□□□ 0.1
SEC61A1-207ENST00000498837 KLF8O95600 359 aaPredicted RBP15.66■□□□□ 0.1
SEC61A1-207ENST00000498837 GAP43P17677 238 aa15.66■□□□□ 0.1
SEC61A1-207ENST00000498837 P2RY2P41231 377 aa15.66■□□□□ 0.1
SEC61A1-207ENST00000498837 COL9A2Q14055 689 aaPredicted RBP15.66■□□□□ 0.1
SEC61A1-207ENST00000498837 RABEP1Q15276 862 aa15.66■□□□□ 0.1
SEC61A1-207ENST00000498837 DHCR24Q15392 516 aa15.66■□□□□ 0.1
SEC61A1-207ENST00000498837 TRIM61Q5EBN2 209 aa15.66■□□□□ 0.1
SEC61A1-207ENST00000498837 LARP1BQ659C4 914 aaKnown RBP15.66■□□□□ 0.1
SEC61A1-207ENST00000498837 VSTM1Q6UX27 236 aa15.66■□□□□ 0.1
SEC61A1-207ENST00000498837 DENND5BQ6ZUT9 1274 aa15.66■□□□□ 0.1
SEC61A1-207ENST00000498837 C12orf40Q86WS4 652 aa15.66■□□□□ 0.1
SEC61A1-207ENST00000498837 SYCP3Q8IZU3 236 aa15.66■□□□□ 0.1
SEC61A1-207ENST00000498837 OR5B17Q8NGF7 314 aa15.66■□□□□ 0.1
SEC61A1-207ENST00000498837 STK17AQ9UEE5 414 aa15.66■□□□□ 0.1
SEC61A1-207ENST00000498837 EVLQ9UI08 416 aaPredicted RBP15.66■□□□□ 0.1
SEC61A1-207ENST00000498837 MBD1Q9UIS9 605 aaPredicted RBP15.66■□□□□ 0.1
SEC61A1-207ENST00000498837 CDH9Q9ULB4 789 aa15.66■□□□□ 0.1
SEC61A1-207ENST00000498837 CPQQ9Y646 472 aa15.66■□□□□ 0.1
SEC61A1-207ENST00000498837 PCDH15Q96QU1 1955 aa15.66■□□□□ 0.1
SEC61A1-207ENST00000498837 ZNF840PA6NDX5 716 aa15.65■□□□□ 0.1
SEC61A1-207ENST00000498837 MAP3K13O43283 966 aa15.65■□□□□ 0.1
SEC61A1-207ENST00000498837 ALDH1A2O94788 518 aa15.65■□□□□ 0.1
SEC61A1-207ENST00000498837 PTGER3P43115 390 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms