RNA–Protein interactions for RNA: ENST00000498810.1

CDK11A-222, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 2

Gene CDK11A, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-222ENST00000498810 SOWAHAQ2M3V2 549 aa11.39□□□□□ -0.59
CDK11A-222ENST00000498810 FAM78AQ5JUQ0 283 aa11.39□□□□□ -0.59
CDK11A-222ENST00000498810 GPR158Q5T848 1215 aa11.39□□□□□ -0.59
CDK11A-222ENST00000498810 DNAJB7Q7Z6W7 309 aaPredicted RBP11.39□□□□□ -0.59
CDK11A-222ENST00000498810 FAM186BQ8IYM0 893 aa11.39□□□□□ -0.59
CDK11A-222ENST00000498810 GUF1Q8N442 669 aaKnown RBP11.39□□□□□ -0.59
CDK11A-222ENST00000498810 TTC16Q8NEE8 873 aa11.39□□□□□ -0.59
CDK11A-222ENST00000498810 SHKBP1Q8TBC3 707 aa11.39□□□□□ -0.59
CDK11A-222ENST00000498810 SMARCD2Q92925 531 aa11.39□□□□□ -0.59
CDK11A-222ENST00000498810 ELSPBP1Q96BH3 223 aa11.39□□□□□ -0.59
CDK11A-222ENST00000498810 BORCS6Q96GS4 357 aa11.39□□□□□ -0.59
CDK11A-222ENST00000498810 TRMT61BQ9BVS5 477 aaKnown RBP11.39□□□□□ -0.59
CDK11A-222ENST00000498810 DNAI2Q9GZS0 605 aa11.39□□□□□ -0.59
CDK11A-222ENST00000498810 DNAJC25Q9H1X3 360 aa11.39□□□□□ -0.59
CDK11A-222ENST00000498810 KCTD10Q9H3F6 313 aa11.39□□□□□ -0.59
CDK11A-222ENST00000498810 SLC2A4RGQ9NR83 387 aa11.39□□□□□ -0.59
CDK11A-222ENST00000498810 MAGEC2Q9UBF1 373 aaPredicted RBP11.39□□□□□ -0.59
CDK11A-222ENST00000498810 UXTQ9UBK9 157 aaPredicted RBP11.39□□□□□ -0.59
CDK11A-222ENST00000498810 GTF3C4Q9UKN8 822 aa11.39□□□□□ -0.59
CDK11A-222ENST00000498810 CDH9Q9ULB4 789 aa11.39□□□□□ -0.59
CDK11A-222ENST00000498810 KIF26AQ9ULI4 1882 aaPredicted RBP11.39□□□□□ -0.59
CDK11A-222ENST00000498810 GREB1Q4ZG55 1949 aa11.39□□□□□ -0.59
CDK11A-222ENST00000498810 A8MXQ7 604 aa11.38□□□□□ -0.59
CDK11A-222ENST00000498810 ZNF263O14978 683 aa11.38□□□□□ -0.59
CDK11A-222ENST00000498810 VNN2O95498 520 aa11.38□□□□□ -0.59
CDK11A-222ENST00000498810 WARSP23381 471 aaKnown RBP11.38□□□□□ -0.59
CDK11A-222ENST00000498810 AVPR1AP37288 418 aa11.38□□□□□ -0.59
CDK11A-222ENST00000498810 GRIK1P39086 918 aa11.38□□□□□ -0.59
CDK11A-222ENST00000498810 CLCN5P51795 746 aa11.38□□□□□ -0.59
CDK11A-222ENST00000498810 VAMP7P51809 220 aa11.38□□□□□ -0.59
CDK11A-222ENST00000498810 EPHA5P54756 1037 aa11.38□□□□□ -0.59
CDK11A-222ENST00000498810 MYL6P60660 151 aa11.38□□□□□ -0.59
CDK11A-222ENST00000498810 GPC5P78333 572 aa11.38□□□□□ -0.59
CDK11A-222ENST00000498810 UBXN2BQ14CS0 331 aa11.38□□□□□ -0.59
CDK11A-222ENST00000498810 MDH1BQ5I0G3 518 aa11.38□□□□□ -0.59
CDK11A-222ENST00000498810 TCERG1LQ5VWI1 586 aa11.38□□□□□ -0.59
CDK11A-222ENST00000498810 TDRD10Q5VZ19 366 aaKnown RBP11.38□□□□□ -0.59
CDK11A-222ENST00000498810 TANGO2Q6ICL3 276 aa11.38□□□□□ -0.59
CDK11A-222ENST00000498810 TPRG1Q6ZUI0 275 aa11.38□□□□□ -0.59
CDK11A-222ENST00000498810 INTS8Q75QN2 995 aaKnown RBP11.38□□□□□ -0.59
CDK11A-222ENST00000498810 LRRTM3Q86VH5 581 aa11.38□□□□□ -0.59
CDK11A-222ENST00000498810 OSTM1Q86WC4 334 aa11.38□□□□□ -0.59
CDK11A-222ENST00000498810 TMC8Q8IU68 726 aa11.38□□□□□ -0.59
CDK11A-222ENST00000498810 SLC9A9Q8IVB4 645 aa11.38□□□□□ -0.59
CDK11A-222ENST00000498810 SMYD4Q8IYR2 804 aaPredicted RBP11.38□□□□□ -0.59
CDK11A-222ENST00000498810 FMR1NBQ8N0W7 255 aaPredicted RBP11.38□□□□□ -0.59
CDK11A-222ENST00000498810 CSGALNACT1Q8TDX6 532 aa11.38□□□□□ -0.59
CDK11A-222ENST00000498810 PARD3BQ8TEW8 1205 aa11.38□□□□□ -0.59
CDK11A-222ENST00000498810 DEPDC1BQ8WUY9 529 aa11.38□□□□□ -0.59
CDK11A-222ENST00000498810 MRPS31Q92665 395 aaKnown RBP11.38□□□□□ -0.59
CDK11A-222ENST00000498810 MYLPFQ96A32 169 aa11.38□□□□□ -0.59
CDK11A-222ENST00000498810 E2F7Q96AV8 911 aa11.38□□□□□ -0.59
CDK11A-222ENST00000498810 ASB16Q96NS5 453 aa11.38□□□□□ -0.59
CDK11A-222ENST00000498810 MED10Q9BTT4 135 aa11.38□□□□□ -0.59
CDK11A-222ENST00000498810 RPP25Q9BUL9 199 aaKnown RBP11.38□□□□□ -0.59
CDK11A-222ENST00000498810 GTPBP4Q9BZE4 634 aaKnown RBP11.38□□□□□ -0.59
CDK11A-222ENST00000498810 IRF2BPLQ9H1B7 796 aa11.38□□□□□ -0.59
CDK11A-222ENST00000498810 TRPC7Q9HCX4 862 aa11.38□□□□□ -0.59
CDK11A-222ENST00000498810 ZNF334Q9HCZ1 680 aaPredicted RBP11.38□□□□□ -0.59
CDK11A-222ENST00000498810 ABCB6Q9NP58 842 aa11.38□□□□□ -0.59
CDK11A-222ENST00000498810 TMLHEQ9NVH6 421 aa11.38□□□□□ -0.59
CDK11A-222ENST00000498810 CETN3O15182 167 aa11.37□□□□□ -0.59
CDK11A-222ENST00000498810 HCRTO43612 131 aa11.37□□□□□ -0.59
CDK11A-222ENST00000498810 PSMC3P17980 439 aa11.37□□□□□ -0.59
CDK11A-222ENST00000498810 AOC1P19801 751 aa11.37□□□□□ -0.59
CDK11A-222ENST00000498810 CYP2F1P24903 491 aa11.37□□□□□ -0.59
CDK11A-222ENST00000498810 GDI1P31150 447 aa11.37□□□□□ -0.59
CDK11A-222ENST00000498810 PSMC2P35998 433 aaKnown RBP11.37□□□□□ -0.59
CDK11A-222ENST00000498810 GNL1P36915 607 aaPredicted RBP11.37□□□□□ -0.59
CDK11A-222ENST00000498810 GPR15P49685 360 aa11.37□□□□□ -0.59
CDK11A-222ENST00000498810 RAB15P59190 212 aa11.37□□□□□ -0.59
CDK11A-222ENST00000498810 IFRD2Q12894 506 aaPredicted RBP11.37□□□□□ -0.59
CDK11A-222ENST00000498810 ADAM9Q13443 819 aa11.37□□□□□ -0.59
CDK11A-222ENST00000498810 DDR2Q16832 855 aa11.37□□□□□ -0.59
CDK11A-222ENST00000498810 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.37□□□□□ -0.59
CDK11A-222ENST00000498810 DCAF17Q5H9S7 520 aaPredicted RBP11.37□□□□□ -0.59
CDK11A-222ENST00000498810 STXBP5Q5T5C0 1151 aa11.37□□□□□ -0.59
CDK11A-222ENST00000498810 SDHAF4Q5VUM1 108 aa11.37□□□□□ -0.59
CDK11A-222ENST00000498810 CWF19L1Q69YN2 538 aaKnown RBP11.37□□□□□ -0.59
CDK11A-222ENST00000498810 TMEM105Q8N8V8 129 aa11.37□□□□□ -0.59
CDK11A-222ENST00000498810 STKLD1Q8NE28 680 aa11.37□□□□□ -0.59
CDK11A-222ENST00000498810 ATOH1Q92858 354 aaPredicted RBP11.37□□□□□ -0.59
CDK11A-222ENST00000498810 FUBP3Q96I24 572 aaKnown RBP eCLIP11.37□□□□□ -0.59
CDK11A-222ENST00000498810 GSDMAQ96QA5 445 aa11.37□□□□□ -0.59
CDK11A-222ENST00000498810 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.37□□□□□ -0.59
CDK11A-222ENST00000498810 EHD2Q9NZN4 543 aa11.37□□□□□ -0.59
CDK11A-222ENST00000498810 TRAF3IP3Q9Y228 551 aa11.37□□□□□ -0.59
CDK11A-222ENST00000498810 MRPS17Q9Y2R5 130 aaKnown RBP11.37□□□□□ -0.59
CDK11A-222ENST00000498810 ANAPC1Q9H1A4 1944 aa11.37□□□□□ -0.59
CDK11A-222ENST00000498810 MUC6Q6W4X9 2439 aa11.36□□□□□ -0.59
CDK11A-222ENST00000498810 MYBPHLA2RUH7 354 aa11.36□□□□□ -0.59
CDK11A-222ENST00000498810 KRBA1A5PL33 1030 aa11.36□□□□□ -0.59
CDK11A-222ENST00000498810 HEPACAM2A8MVW5 462 aa11.36□□□□□ -0.59
CDK11A-222ENST00000498810 PSMA7O14818 248 aa11.36□□□□□ -0.59
CDK11A-222ENST00000498810 STX10O60499 249 aa11.36□□□□□ -0.59
CDK11A-222ENST00000498810 TACC1O75410 805 aa11.36□□□□□ -0.59
CDK11A-222ENST00000498810 CST3P01034 146 aaPredicted RBP11.36□□□□□ -0.59
CDK11A-222ENST00000498810 TRIM49P0CI25 452 aa11.36□□□□□ -0.59
CDK11A-222ENST00000498810 TRIM49CP0CI26 452 aa11.36□□□□□ -0.59
CDK11A-222ENST00000498810 LORP23490 312 aaPredicted RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms