RNA–Protein interactions for RNA: ENST00000498658.5

FXR1-222, Transcript of FMR1 autosomal homolog 1, human

TSL 2

Gene FXR1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-222	ENST00000498658	DMAP1	Q9NPF5	467 aa	Predicted RBP	11.17	□□□□□ -0.62
FXR1-222	ENST00000498658	CA14	Q9ULX7	337 aa		11.17	□□□□□ -0.62
FXR1-222	ENST00000498658	MRPS17	Q9Y2R5	130 aa	Known RBP	11.17	□□□□□ -0.62
FXR1-222	ENST00000498658	NME7	Q9Y5B8	376 aa		11.17	□□□□□ -0.62
FXR1-222	ENST00000498658	PTPRD	P23468	1912 aa		11.17	□□□□□ -0.62
FXR1-222	ENST00000498658	ZDBF2	Q9HCK1	2354 aa		11.17	□□□□□ -0.62
FXR1-222	ENST00000498658	TRAV19	A0A0A6YYK7	116 aa		11.16	□□□□□ -0.62
FXR1-222	ENST00000498658	KRBA1	A5PL33	1030 aa		11.16	□□□□□ -0.62
FXR1-222	ENST00000498658	MAN2B1	O00754	1011 aa		11.16	□□□□□ -0.62
FXR1-222	ENST00000498658	CHAD	O15335	359 aa		11.16	□□□□□ -0.62
FXR1-222	ENST00000498658	CILP	O75339	1184 aa		11.16	□□□□□ -0.62
FXR1-222	ENST00000498658	PDGFB	P01127	241 aa	Predicted RBP	11.16	□□□□□ -0.62
FXR1-222	ENST00000498658	USP17L7	P0C7H9	530 aa		11.16	□□□□□ -0.62
FXR1-222	ENST00000498658	TBXAS1	P24557	533 aa	Predicted RBP	11.16	□□□□□ -0.62
FXR1-222	ENST00000498658	GDI1	P31150	447 aa		11.16	□□□□□ -0.62
FXR1-222	ENST00000498658	VIPR2	P41587	438 aa		11.16	□□□□□ -0.62
FXR1-222	ENST00000498658	FMO5	P49326	533 aa		11.16	□□□□□ -0.62
FXR1-222	ENST00000498658	CYP4F8	P98187	520 aa		11.16	□□□□□ -0.62
FXR1-222	ENST00000498658	GRM2	Q14416	872 aa		11.16	□□□□□ -0.62
FXR1-222	ENST00000498658	ZNF268	Q14587	947 aa	Predicted RBP	11.16	□□□□□ -0.62
FXR1-222	ENST00000498658	MLF2	Q15773	248 aa	Predicted RBP	11.16	□□□□□ -0.62
FXR1-222	ENST00000498658	CCDC142	Q17RM4	750 aa		11.16	□□□□□ -0.62
FXR1-222	ENST00000498658	CBWD6	Q4V339	395 aa		11.16	□□□□□ -0.62
FXR1-222	ENST00000498658	CBWD3	Q5JTY5	395 aa		11.16	□□□□□ -0.62
FXR1-222	ENST00000498658	CBWD5	Q5RIA9	395 aa		11.16	□□□□□ -0.62
FXR1-222	ENST00000498658	STXBP5	Q5T5C0	1151 aa		11.16	□□□□□ -0.62
FXR1-222	ENST00000498658	SDHAF4	Q5VUM1	108 aa		11.16	□□□□□ -0.62
FXR1-222	ENST00000498658	VIT	Q6UXI7	678 aa		11.16	□□□□□ -0.62
FXR1-222	ENST00000498658	TMEM150A	Q86TG1	271 aa		11.16	□□□□□ -0.62
FXR1-222	ENST00000498658	FAM35A	Q86V20	835 aa		11.16	□□□□□ -0.62
FXR1-222	ENST00000498658	MAB21L3	Q8N8X9	362 aa		11.16	□□□□□ -0.62
FXR1-222	ENST00000498658	ST13P5	Q8NFI4	369 aa	Predicted RBP	11.16	□□□□□ -0.62
FXR1-222	ENST00000498658	BPIFB1	Q8TDL5	484 aa		11.16	□□□□□ -0.62
FXR1-222	ENST00000498658	CSGALNACT1	Q8TDX6	532 aa		11.16	□□□□□ -0.62
FXR1-222	ENST00000498658	OVCA2	Q8WZ82	227 aa		11.16	□□□□□ -0.62
FXR1-222	ENST00000498658	TTLL2	Q9BWV7	592 aa		11.16	□□□□□ -0.62
FXR1-222	ENST00000498658	SRRT	Q9BXP5	876 aa	Known RBP	11.16	□□□□□ -0.62
FXR1-222	ENST00000498658	SLC46A2	Q9BY10	475 aa		11.16	□□□□□ -0.62
FXR1-222	ENST00000498658	PLA2G2F	Q9BZM2	168 aa		11.16	□□□□□ -0.62
FXR1-222	ENST00000498658	TBC1D17	Q9HA65	648 aa		11.16	□□□□□ -0.62
FXR1-222	ENST00000498658	APOBEC3G	Q9HC16	384 aa	Known RBP	11.16	□□□□□ -0.62
FXR1-222	ENST00000498658	LMBRD1	Q9NUN5	540 aa		11.16	□□□□□ -0.62
FXR1-222	ENST00000498658	TDP1	Q9NUW8	608 aa		11.16	□□□□□ -0.62
FXR1-222	ENST00000498658	TRPM5	Q9NZQ8	1165 aa		11.16	□□□□□ -0.62
FXR1-222	ENST00000498658	NUP210	Q8TEM1	1887 aa	Predicted RBP	11.16	□□□□□ -0.62
FXR1-222	ENST00000498658	DENND4C	Q5VZ89	1909 aa		11.15	□□□□□ -0.62
FXR1-222	ENST00000498658	ZNF318	Q5VUA4	2279 aa		11.15	□□□□□ -0.62
FXR1-222	ENST00000498658	NCAN	O14594	1321 aa		11.15	□□□□□ -0.62
FXR1-222	ENST00000498658	KANSL1L	A0AUZ9	987 aa		11.15	□□□□□ -0.62
FXR1-222	ENST00000498658	CLDN5	O00501	218 aa		11.15	□□□□□ -0.62
FXR1-222	ENST00000498658	NRG2	O14511	850 aa	Predicted RBP	11.15	□□□□□ -0.62
FXR1-222	ENST00000498658	NCAM2	O15394	837 aa		11.15	□□□□□ -0.62
FXR1-222	ENST00000498658	AP1G2	O75843	785 aa		11.15	□□□□□ -0.62
FXR1-222	ENST00000498658	FAM200B	P0CF97	657 aa		11.15	□□□□□ -0.62
FXR1-222	ENST00000498658	NPR3	P17342	541 aa		11.15	□□□□□ -0.62
FXR1-222	ENST00000498658	CD58	P19256	250 aa		11.15	□□□□□ -0.62
FXR1-222	ENST00000498658	YWHAQ	P27348	245 aa		11.15	□□□□□ -0.62
FXR1-222	ENST00000498658	MAGEA9	P43362	315 aa		11.15	□□□□□ -0.62
FXR1-222	ENST00000498658	PTPN5	P54829	565 aa		11.15	□□□□□ -0.62
FXR1-222	ENST00000498658	STX17	P56962	302 aa		11.15	□□□□□ -0.62
FXR1-222	ENST00000498658	SLC8A3	P57103	927 aa		11.15	□□□□□ -0.62
FXR1-222	ENST00000498658	CUL2	Q13617	745 aa		11.15	□□□□□ -0.62
FXR1-222	ENST00000498658	TPD52L1	Q16890	204 aa	Predicted RBP	11.15	□□□□□ -0.62
FXR1-222	ENST00000498658	TXNDC8	Q6A555	127 aa		11.15	□□□□□ -0.62
FXR1-222	ENST00000498658	ZNF852	Q6ZMS4	543 aa		11.15	□□□□□ -0.62
FXR1-222	ENST00000498658	FUK	Q8N0W3	1084 aa		11.15	□□□□□ -0.62
FXR1-222	ENST00000498658	STKLD1	Q8NE28	680 aa		11.15	□□□□□ -0.62
FXR1-222	ENST00000498658	SLC2A14	Q8TDB8	520 aa		11.15	□□□□□ -0.62
FXR1-222	ENST00000498658	SEMA4D	Q92854	862 aa		11.15	□□□□□ -0.62
FXR1-222	ENST00000498658	CYFIP2	Q96F07	1278 aa		11.15	□□□□□ -0.62
FXR1-222	ENST00000498658	HNRNPAB	Q99729	332 aa	Known RBP	11.15	□□□□□ -0.62
FXR1-222	ENST00000498658	DDX23	Q9BUQ8	820 aa	Known RBP	11.15	□□□□□ -0.62
FXR1-222	ENST00000498658	OSBPL6	Q9BZF3	934 aa		11.15	□□□□□ -0.62
FXR1-222	ENST00000498658	FBXO44	Q9H4M3	255 aa		11.15	□□□□□ -0.62
FXR1-222	ENST00000498658	CSNK1G1	Q9HCP0	422 aa		11.15	□□□□□ -0.62
FXR1-222	ENST00000498658	PNPLA8	Q9NP80	782 aa		11.15	□□□□□ -0.62
FXR1-222	ENST00000498658	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	11.15	□□□□□ -0.62	2e-6	■■■■■ 34.1
FXR1-222	ENST00000498658	KRT82	Q9NSB4	513 aa		11.15	□□□□□ -0.62
FXR1-222	ENST00000498658	CISH	Q9NSE2	258 aa		11.15	□□□□□ -0.62
FXR1-222	ENST00000498658	SIT1	Q9Y3P8	196 aa		11.15	□□□□□ -0.62
FXR1-222	ENST00000498658	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	11.15	□□□□□ -0.62
FXR1-222	ENST00000498658	GREB1	Q4ZG55	1949 aa		11.14	□□□□□ -0.63
FXR1-222	ENST00000498658	MBD3	O95983	291 aa		11.14	□□□□□ -0.63
FXR1-222	ENST00000498658	AFP	P02771	609 aa	Known RBP	11.14	□□□□□ -0.63
FXR1-222	ENST00000498658	CKM	P06732	381 aa		11.14	□□□□□ -0.63
FXR1-222	ENST00000498658	HDC	P19113	662 aa		11.14	□□□□□ -0.63
FXR1-222	ENST00000498658	ERCC5	P28715	1186 aa	Predicted RBP	11.14	□□□□□ -0.63
FXR1-222	ENST00000498658	VCP	P55072	806 aa	Known RBP	11.14	□□□□□ -0.63
FXR1-222	ENST00000498658	AMPD2	Q01433	879 aa		11.14	□□□□□ -0.63
FXR1-222	ENST00000498658	KCNH2	Q12809	1159 aa		11.14	□□□□□ -0.63
FXR1-222	ENST00000498658	TAF10	Q12962	218 aa		11.14	□□□□□ -0.63
FXR1-222	ENST00000498658	IER5L	Q5T953	404 aa		11.14	□□□□□ -0.63
FXR1-222	ENST00000498658	CWF19L1	Q69YN2	538 aa	Known RBP	11.14	□□□□□ -0.63
FXR1-222	ENST00000498658	CC2D1A	Q6P1N0	951 aa	Predicted RBP	11.14	□□□□□ -0.63
FXR1-222	ENST00000498658	FAM114A1	Q8IWE2	563 aa		11.14	□□□□□ -0.63
FXR1-222	ENST00000498658	TRIM59	Q8IWR1	403 aa		11.14	□□□□□ -0.63
FXR1-222	ENST00000498658	KIAA1958	Q8N8K9	716 aa		11.14	□□□□□ -0.63
FXR1-222	ENST00000498658	C12orf29	Q8N999	325 aa		11.14	□□□□□ -0.63
FXR1-222	ENST00000498658	EXOC4	Q96A65	974 aa		11.14	□□□□□ -0.63
FXR1-222	ENST00000498658	ELMO3	Q96BJ8	720 aa		11.14	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms