RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 SEC24CP53992 1094 aa4.79□□□□□ -1.64
SMC4-225ENST00000497203 MC2RQ01718 297 aa4.79□□□□□ -1.64
SMC4-225ENST00000497203 RAPGEF1Q13905 1077 aa4.79□□□□□ -1.64
SMC4-225ENST00000497203 ARHGEF7Q14155 803 aa4.79□□□□□ -1.64
SMC4-225ENST00000497203 PUM3Q15397 648 aaKnown RBP4.79□□□□□ -1.64
SMC4-225ENST00000497203 PLA1AQ53H76 456 aa4.79□□□□□ -1.64
SMC4-225ENST00000497203 FBXO38Q6PIJ6 1188 aa4.79□□□□□ -1.64
SMC4-225ENST00000497203 USP17L6PQ6QN14 398 aa4.79□□□□□ -1.64
SMC4-225ENST00000497203 KRT28Q7Z3Y7 464 aa4.79□□□□□ -1.64
SMC4-225ENST00000497203 CLNKQ7Z7G1 428 aa4.79□□□□□ -1.64
SMC4-225ENST00000497203 KRT73Q86Y46 540 aa4.79□□□□□ -1.64
SMC4-225ENST00000497203 SLC44A3Q8N4M1 653 aa4.79□□□□□ -1.64
SMC4-225ENST00000497203 VGLL2Q8N8G2 317 aa4.79□□□□□ -1.64
SMC4-225ENST00000497203 SPATA5Q8NB90 893 aa4.79□□□□□ -1.64
SMC4-225ENST00000497203 PSD4Q8NDX1 1056 aa4.79□□□□□ -1.64
SMC4-225ENST00000497203 SUPT20HQ8NEM7 779 aa4.79□□□□□ -1.64
SMC4-225ENST00000497203 POC1BQ8TC44 478 aa4.79□□□□□ -1.64
SMC4-225ENST00000497203 RAPGEF4Q8WZA2 1011 aa4.79□□□□□ -1.64
SMC4-225ENST00000497203 CCT6BQ92526 530 aa4.79□□□□□ -1.64
SMC4-225ENST00000497203 TMEM125Q96AQ2 219 aa4.79□□□□□ -1.64
SMC4-225ENST00000497203 Q96MF0 132 aa4.79□□□□□ -1.64
SMC4-225ENST00000497203 COQ10AQ96MF6 247 aa4.79□□□□□ -1.64
SMC4-225ENST00000497203 MESP1Q9BRJ9 268 aa4.79□□□□□ -1.64
SMC4-225ENST00000497203 TTYH3Q9C0H2 523 aa4.79□□□□□ -1.64
SMC4-225ENST00000497203 TOR3AQ9H497 397 aa4.79□□□□□ -1.64
SMC4-225ENST00000497203 HEYLQ9NQ87 328 aaPredicted RBP4.79□□□□□ -1.64
SMC4-225ENST00000497203 TBC1D23Q9NUY8 699 aa4.79□□□□□ -1.64
SMC4-225ENST00000497203 MRPS18AQ9NVS2 196 aaKnown RBP4.79□□□□□ -1.64
SMC4-225ENST00000497203 SLC39A10Q9ULF5 831 aa4.79□□□□□ -1.64
SMC4-225ENST00000497203 SPATA31A3Q5VYP0 1347 aa4.78□□□□□ -1.64
SMC4-225ENST00000497203 PRAMEF33A0A0G2JMD5 474 aa4.78□□□□□ -1.64
SMC4-225ENST00000497203 AQP7P3A6NL99 342 aa4.78□□□□□ -1.64
SMC4-225ENST00000497203 TOR1BO14657 336 aa4.78□□□□□ -1.64
SMC4-225ENST00000497203 PRAMEF10O60809 474 aa4.78□□□□□ -1.64
SMC4-225ENST00000497203 NBNO60934 754 aa4.78□□□□□ -1.64
SMC4-225ENST00000497203 SUN1O94901 812 aa4.78□□□□□ -1.64
SMC4-225ENST00000497203 A1BGP04217 495 aa4.78□□□□□ -1.64
SMC4-225ENST00000497203 GRK6P43250 576 aa4.78□□□□□ -1.64
SMC4-225ENST00000497203 AVPR1BP47901 424 aa4.78□□□□□ -1.64
SMC4-225ENST00000497203 GCLCP48506 637 aaPredicted RBP4.78□□□□□ -1.64
SMC4-225ENST00000497203 PXNP49023 591 aaPredicted RBP4.78□□□□□ -1.64
SMC4-225ENST00000497203 CPT1AP50416 773 aa4.78□□□□□ -1.64
SMC4-225ENST00000497203 ANXA11P50995 505 aaKnown RBP4.78□□□□□ -1.64
SMC4-225ENST00000497203 COPAP53621 1224 aa4.78□□□□□ -1.64
SMC4-225ENST00000497203 KRT17Q04695 432 aa4.78□□□□□ -1.64
SMC4-225ENST00000497203 ELF2Q15723 593 aa4.78□□□□□ -1.64
SMC4-225ENST00000497203 KRTAP15-1Q3LI76 137 aa4.78□□□□□ -1.64
SMC4-225ENST00000497203 CD300EQ496F6 205 aaPredicted RBP4.78□□□□□ -1.64
SMC4-225ENST00000497203 CCDC38Q502W7 563 aa4.78□□□□□ -1.64
SMC4-225ENST00000497203 TAF2Q6P1X5 1199 aa4.78□□□□□ -1.64
SMC4-225ENST00000497203 SLC30A10Q6XR72 485 aa4.78□□□□□ -1.64
SMC4-225ENST00000497203 COLGALT2Q8IYK4 626 aa4.78□□□□□ -1.64
SMC4-225ENST00000497203 CAVIN3Q969G5 261 aa4.78□□□□□ -1.64
SMC4-225ENST00000497203 TRIM63Q969Q1 353 aa4.78□□□□□ -1.64
SMC4-225ENST00000497203 MUL1Q969V5 352 aa4.78□□□□□ -1.64
SMC4-225ENST00000497203 PTCD3Q96EY7 689 aaKnown RBP4.78□□□□□ -1.64
SMC4-225ENST00000497203 LRRC46Q96FV0 321 aa4.78□□□□□ -1.64
SMC4-225ENST00000497203 SNX27Q96L92 541 aa4.78□□□□□ -1.64
SMC4-225ENST00000497203 SCLT1Q96NL6 688 aa4.78□□□□□ -1.64
SMC4-225ENST00000497203 FAM83DQ9H4H8 585 aa4.78□□□□□ -1.64
SMC4-225ENST00000497203 AGO4Q9HCK5 861 aaKnown RBP4.78□□□□□ -1.64
SMC4-225ENST00000497203 NECTIN3Q9NQS3 549 aa4.78□□□□□ -1.64
SMC4-225ENST00000497203 GJB4Q9NTQ9 266 aa4.78□□□□□ -1.64
SMC4-225ENST00000497203 TBCCD1Q9NVR7 557 aa4.78□□□□□ -1.64
SMC4-225ENST00000497203 CAPN11Q9UMQ6 739 aa4.78□□□□□ -1.64
SMC4-225ENST00000497203 MORC2Q9Y6X9 1032 aaPredicted RBP4.78□□□□□ -1.64
SMC4-225ENST00000497203 MAST3O60307 1309 aa4.77□□□□□ -1.65
SMC4-225ENST00000497203 SALL3Q9BXA9 1300 aa4.77□□□□□ -1.65
SMC4-225ENST00000497203 TRGV11A0A075B6L2 103 aa4.77□□□□□ -1.65
SMC4-225ENST00000497203 RAB27BO00194 218 aa4.77□□□□□ -1.65
SMC4-225ENST00000497203 DCLK1O15075 740 aa4.77□□□□□ -1.65
SMC4-225ENST00000497203 RHOBTB3O94955 611 aa4.77□□□□□ -1.65
SMC4-225ENST00000497203 CSTBP04080 98 aaKnown RBP4.77□□□□□ -1.65
SMC4-225ENST00000497203 TPH1P17752 444 aa4.77□□□□□ -1.65
SMC4-225ENST00000497203 GATA3P23771 443 aa4.77□□□□□ -1.65
SMC4-225ENST00000497203 CHKAP35790 457 aa4.77□□□□□ -1.65
SMC4-225ENST00000497203 PLA2G5P39877 138 aa4.77□□□□□ -1.65
SMC4-225ENST00000497203 MPLP40238 635 aa4.77□□□□□ -1.65
SMC4-225ENST00000497203 PPM1FP49593 454 aaPredicted RBP4.77□□□□□ -1.65
SMC4-225ENST00000497203 RPS7P62081 194 aaKnown RBP4.77□□□□□ -1.65
SMC4-225ENST00000497203 BLOC1S1P78537 153 aa4.77□□□□□ -1.65
SMC4-225ENST00000497203 HLXQ14774 488 aaPredicted RBP4.77□□□□□ -1.65
SMC4-225ENST00000497203 TMEM95Q3KNT9 176 aa4.77□□□□□ -1.65
SMC4-225ENST00000497203 PREPLQ4J6C6 727 aaPredicted RBP4.77□□□□□ -1.65
SMC4-225ENST00000497203 RRAGBQ5VZM2 374 aa4.77□□□□□ -1.65
SMC4-225ENST00000497203 ARL6IP4Q66PJ3 421 aaKnown RBP4.77□□□□□ -1.65
SMC4-225ENST00000497203 SP5Q6BEB4 398 aaPredicted RBP4.77□□□□□ -1.65
SMC4-225ENST00000497203 SFRP4Q6FHJ7 346 aaPredicted RBP4.77□□□□□ -1.65
SMC4-225ENST00000497203 TLDC1Q6P9B6 456 aa4.77□□□□□ -1.65
SMC4-225ENST00000497203 ZDHHC24Q6UX98 284 aa4.77□□□□□ -1.65
SMC4-225ENST00000497203 TMPRSS9Q7Z410 1059 aa4.77□□□□□ -1.65
SMC4-225ENST00000497203 SMAP1Q8IYB5 467 aaPredicted RBP4.77□□□□□ -1.65
SMC4-225ENST00000497203 NKAPQ8N5F7 415 aaKnown RBP4.77□□□□□ -1.65
SMC4-225ENST00000497203 MYRIPQ8NFW9 859 aa4.77□□□□□ -1.65
SMC4-225ENST00000497203 SSH3Q8TE77 659 aa4.77□□□□□ -1.65
SMC4-225ENST00000497203 ZNF384Q8TF68 577 aa4.77□□□□□ -1.65
SMC4-225ENST00000497203 NELL2Q99435 816 aa4.77□□□□□ -1.65
SMC4-225ENST00000497203 CASS4Q9NQ75 786 aa4.77□□□□□ -1.65
SMC4-225ENST00000497203 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.77□□□□□ -1.65
SMC4-225ENST00000497203 FAM234BA2RU67 622 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms