RNA–Protein interactions for RNA: ENST00000496959.5

MDM2-220, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 897 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-220ENST00000496959 PRAMEF17Q5VTA0 474 aa6.6□□□□□ -1.35
MDM2-220ENST00000496959 MTHFD1LQ6UB35 978 aa6.6□□□□□ -1.35
MDM2-220ENST00000496959 NAPRTQ6XQN6 538 aa6.6□□□□□ -1.35
MDM2-220ENST00000496959 ZNF782Q6ZMW2 699 aaPredicted RBP6.6□□□□□ -1.35
MDM2-220ENST00000496959 Q6ZWC4 215 aa6.6□□□□□ -1.35
MDM2-220ENST00000496959 RAVER1Q8IY67 606 aaKnown RBP6.6□□□□□ -1.35
MDM2-220ENST00000496959 ABRAQ8N0Z2 381 aa6.6□□□□□ -1.35
MDM2-220ENST00000496959 ABHD11Q8NFV4 315 aa6.6□□□□□ -1.35
MDM2-220ENST00000496959 RAPGEF4Q8WZA2 1011 aa6.6□□□□□ -1.35
MDM2-220ENST00000496959 SEMA4CQ9C0C4 833 aa6.6□□□□□ -1.35
MDM2-220ENST00000496959 ZNF518BQ9C0D4 1074 aa6.6□□□□□ -1.35
MDM2-220ENST00000496959 ATP6V0A4Q9HBG4 840 aa6.6□□□□□ -1.35
MDM2-220ENST00000496959 KIF21AQ7Z4S6 1674 aa6.6□□□□□ -1.35
MDM2-220ENST00000496959 TJP3O95049 919 aa6.59□□□□□ -1.35
MDM2-220ENST00000496959 PRKCBP05771 671 aa6.59□□□□□ -1.35
MDM2-220ENST00000496959 CERS1P27544 350 aa6.59□□□□□ -1.35
MDM2-220ENST00000496959 TUBA4AP68366 448 aa6.59□□□□□ -1.35
MDM2-220ENST00000496959 IZUMO1Q8IYV9 350 aa6.59□□□□□ -1.35
MDM2-220ENST00000496959 VGLL2Q8N8G2 317 aa6.59□□□□□ -1.35
MDM2-220ENST00000496959 BPIFB1Q8TDL5 484 aa6.59□□□□□ -1.35
MDM2-220ENST00000496959 PPP2R3CQ969Q6 453 aa6.59□□□□□ -1.35
MDM2-220ENST00000496959 SMURF2Q9HAU4 748 aa6.59□□□□□ -1.35
MDM2-220ENST00000496959 NESP48681 1621 aa6.58□□□□□ -1.36
MDM2-220ENST00000496959 CFAP69A5D8W1 941 aa6.58□□□□□ -1.36
MDM2-220ENST00000496959 SCGB1D2O95969 90 aa6.58□□□□□ -1.36
MDM2-220ENST00000496959 CYP4F2P78329 520 aa6.58□□□□□ -1.36
MDM2-220ENST00000496959 CNN3Q15417 329 aaKnown RBP6.58□□□□□ -1.36
MDM2-220ENST00000496959 ARHGAP29Q52LW3 1261 aa6.58□□□□□ -1.36
MDM2-220ENST00000496959 NXNQ6DKJ4 435 aa6.58□□□□□ -1.36
MDM2-220ENST00000496959 COL23A1Q86Y22 540 aaPredicted RBP6.58□□□□□ -1.36
MDM2-220ENST00000496959 TCEAL8Q8IYN2 117 aa6.58□□□□□ -1.36
MDM2-220ENST00000496959 KIAA0319LQ8IZA0 1049 aa6.58□□□□□ -1.36
MDM2-220ENST00000496959 SMG7Q92540 1137 aaKnown RBP6.58□□□□□ -1.36
MDM2-220ENST00000496959 FAM204AQ9H8W3 233 aa6.58□□□□□ -1.36
MDM2-220ENST00000496959 A1CFQ9NQ94 594 aaKnown RBP6.58□□□□□ -1.36
MDM2-220ENST00000496959 TCEAL9Q9UHQ7 104 aa6.58□□□□□ -1.36
MDM2-220ENST00000496959 GABRQQ9UN88 632 aa6.58□□□□□ -1.36
MDM2-220ENST00000496959 LRRC41Q15345 812 aa6.57□□□□□ -1.36
MDM2-220ENST00000496959 TRIM72Q6ZMU5 477 aa6.57□□□□□ -1.36
MDM2-220ENST00000496959 CAND1Q86VP6 1230 aaKnown RBP6.57□□□□□ -1.36
MDM2-220ENST00000496959 SPARTQ8N0X7 666 aa6.57□□□□□ -1.36
MDM2-220ENST00000496959 MAGEB6Q8N7X4 407 aa6.57□□□□□ -1.36
MDM2-220ENST00000496959 JDP2Q8WYK2 163 aa6.57□□□□□ -1.36
MDM2-220ENST00000496959 DAZAP1Q96EP5 407 aaKnown RBP6.57□□□□□ -1.36
MDM2-220ENST00000496959 C22orf23Q9BZE7 217 aa6.57□□□□□ -1.36
MDM2-220ENST00000496959 TPCN1Q9ULQ1 816 aa6.57□□□□□ -1.36
MDM2-220ENST00000496959 L1RE1Q9UN81 338 aa6.57□□□□□ -1.36
MDM2-220ENST00000496959 SNX14Q9Y5W7 946 aa6.57□□□□□ -1.36
MDM2-220ENST00000496959 EID1Q9Y6B2 187 aa6.57□□□□□ -1.36
MDM2-220ENST00000496959 COL3A1P02461 1466 aaPredicted RBP6.57□□□□□ -1.36
MDM2-220ENST00000496959 USP19O94966 1318 aa6.56□□□□□ -1.36
MDM2-220ENST00000496959 LOC105371045A0A1W2PR82 267 aa6.56□□□□□ -1.36
MDM2-220ENST00000496959 WDR91A4D1P6 747 aa6.56□□□□□ -1.36
MDM2-220ENST00000496959 TMEM233B4DJY2 109 aa6.56□□□□□ -1.36
MDM2-220ENST00000496959 MYO1FO00160 1098 aa6.56□□□□□ -1.36
MDM2-220ENST00000496959 PSMD9O00233 223 aa6.56□□□□□ -1.36
MDM2-220ENST00000496959 TBX3O15119 743 aa6.56□□□□□ -1.36
MDM2-220ENST00000496959 PRPF3O43395 683 aaKnown RBP6.56□□□□□ -1.36
MDM2-220ENST00000496959 LATS1O95835 1130 aa6.56□□□□□ -1.36
MDM2-220ENST00000496959 NHLRC4P0CG21 123 aaPredicted RBP6.56□□□□□ -1.36
MDM2-220ENST00000496959 BRAFP15056 766 aa6.56□□□□□ -1.36
MDM2-220ENST00000496959 CTGFP29279 349 aa6.56□□□□□ -1.36
MDM2-220ENST00000496959 CACNB3P54284 484 aa6.56□□□□□ -1.36
MDM2-220ENST00000496959 SUMO3P55854 103 aaPredicted RBP6.56□□□□□ -1.36
MDM2-220ENST00000496959 LY6KQ17RY6 165 aa6.56□□□□□ -1.36
MDM2-220ENST00000496959 INSCQ1MX18 579 aa6.56□□□□□ -1.36
MDM2-220ENST00000496959 CERCAMQ5T4B2 595 aa6.56□□□□□ -1.36
MDM2-220ENST00000496959 L1TD1Q5T7N2 865 aaKnown RBP6.56□□□□□ -1.36
MDM2-220ENST00000496959 DCAF12L1Q5VU92 463 aa6.56□□□□□ -1.36
MDM2-220ENST00000496959 SLC9A4Q6AI14 798 aa6.56□□□□□ -1.36
MDM2-220ENST00000496959 CYP2W1Q8TAV3 490 aa6.56□□□□□ -1.36
MDM2-220ENST00000496959 TMEM171Q8WVE6 324 aa6.56□□□□□ -1.36
MDM2-220ENST00000496959 MAML1Q92585 1016 aa6.56□□□□□ -1.36
MDM2-220ENST00000496959 SPSB4Q96A44 273 aa6.56□□□□□ -1.36
MDM2-220ENST00000496959 RSPRY1Q96DX4 576 aa6.56□□□□□ -1.36
MDM2-220ENST00000496959 PPP1R9BQ96SB3 815 aa6.56□□□□□ -1.36
MDM2-220ENST00000496959 NRIP3Q9NQ35 241 aa6.56□□□□□ -1.36
MDM2-220ENST00000496959 XPNPEP3Q9NQH7 507 aa6.56□□□□□ -1.36
MDM2-220ENST00000496959 SACM1LQ9NTJ5 587 aa6.56□□□□□ -1.36
MDM2-220ENST00000496959 RNF7Q9UBF6 113 aa6.56□□□□□ -1.36
MDM2-220ENST00000496959 ZNF804BA4D1E1 1349 aa6.55□□□□□ -1.36
MDM2-220ENST00000496959 MRC2Q9UBG0 1479 aa6.55□□□□□ -1.36
MDM2-220ENST00000496959 ISM1B1AKI9 464 aa6.55□□□□□ -1.36
MDM2-220ENST00000496959 TISP43B9A030 160 aa6.55□□□□□ -1.36
MDM2-220ENST00000496959 PRRT4C9JH25 899 aa6.55□□□□□ -1.36
MDM2-220ENST00000496959 PRR35P0CG20 571 aa6.55□□□□□ -1.36
MDM2-220ENST00000496959 CYP2D6P10635 497 aa6.55□□□□□ -1.36
MDM2-220ENST00000496959 EPHB2P29323 1055 aa6.55□□□□□ -1.36
MDM2-220ENST00000496959 PRKAR1BP31321 381 aa6.55□□□□□ -1.36
MDM2-220ENST00000496959 ZNF81P51508 661 aa6.55□□□□□ -1.36
MDM2-220ENST00000496959 KRTAP1-1Q07627 177 aa6.55□□□□□ -1.36
MDM2-220ENST00000496959 CCNIQ14094 377 aa6.55□□□□□ -1.36
MDM2-220ENST00000496959 MLC1Q15049 377 aa6.55□□□□□ -1.36
MDM2-220ENST00000496959 SWSAP1Q6NVH7 229 aa6.55□□□□□ -1.36
MDM2-220ENST00000496959 PNLDC1Q8NA58 520 aaKnown RBP6.55□□□□□ -1.36
MDM2-220ENST00000496959 MACROD1Q9BQ69 325 aa6.55□□□□□ -1.36
MDM2-220ENST00000496959 C17orf80Q9BSJ5 609 aa6.55□□□□□ -1.36
MDM2-220ENST00000496959 GBA2Q9HCG7 927 aaPredicted RBP6.55□□□□□ -1.36
MDM2-220ENST00000496959 CPNE7Q9UBL6 633 aa6.55□□□□□ -1.36
MDM2-220ENST00000496959 WDR62O43379 1518 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms