RNA–Protein interactions for RNA: ENST00000496633.1

CDHR3-214, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 949 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-214ENST00000496633 CYFIP2Q96F07 1278 aa8.06□□□□□ -1.12
CDHR3-214ENST00000496633 HNRNPABQ99729 332 aaKnown RBP8.06□□□□□ -1.12
CDHR3-214ENST00000496633 LPIN3Q9BQK8 851 aa8.06□□□□□ -1.12
CDHR3-214ENST00000496633 SRRTQ9BXP5 876 aaKnown RBP8.06□□□□□ -1.12
CDHR3-214ENST00000496633 MFRPQ9BY79 579 aa8.06□□□□□ -1.12
CDHR3-214ENST00000496633 NAT10Q9H0A0 1025 aaKnown RBP8.06□□□□□ -1.12
CDHR3-214ENST00000496633 MMRN2Q9H8L6 949 aa8.06□□□□□ -1.12
CDHR3-214ENST00000496633 CSNK1G1Q9HCP0 422 aa8.06□□□□□ -1.12
CDHR3-214ENST00000496633 TDP1Q9NUW8 608 aa8.06□□□□□ -1.12
CDHR3-214ENST00000496633 HESX1Q9UBX0 185 aa8.06□□□□□ -1.12
CDHR3-214ENST00000496633 CTNND2Q9UQB3 1225 aa8.06□□□□□ -1.12
CDHR3-214ENST00000496633 SIT1Q9Y3P8 196 aa8.06□□□□□ -1.12
CDHR3-214ENST00000496633 NUP210Q8TEM1 1887 aaPredicted RBP8.05□□□□□ -1.12
CDHR3-214ENST00000496633 KANSL1LA0AUZ9 987 aa8.05□□□□□ -1.12
CDHR3-214ENST00000496633 TRIM49BA6NDI0 452 aa8.05□□□□□ -1.12
CDHR3-214ENST00000496633 HEPACAM2A8MVW5 462 aa8.05□□□□□ -1.12
CDHR3-214ENST00000496633 F8VP50 259 aa8.05□□□□□ -1.12
CDHR3-214ENST00000496633 BIN1O00499 593 aa8.05□□□□□ -1.12
CDHR3-214ENST00000496633 ATP2C2O75185 946 aa8.05□□□□□ -1.12
CDHR3-214ENST00000496633 MOSPD3O75425 235 aa8.05□□□□□ -1.12
CDHR3-214ENST00000496633 AP1G2O75843 785 aa8.05□□□□□ -1.12
CDHR3-214ENST00000496633 LETM1O95202 739 aaPredicted RBP8.05□□□□□ -1.12
CDHR3-214ENST00000496633 CKMP06732 381 aa8.05□□□□□ -1.12
CDHR3-214ENST00000496633 CFHP08603 1231 aa8.05□□□□□ -1.12
CDHR3-214ENST00000496633 PAEPP09466 180 aa8.05□□□□□ -1.12
CDHR3-214ENST00000496633 HDCP19113 662 aa8.05□□□□□ -1.12
CDHR3-214ENST00000496633 EEF1GP26641 437 aaKnown RBP8.05□□□□□ -1.12
CDHR3-214ENST00000496633 YWHAQP27348 245 aa8.05□□□□□ -1.12
CDHR3-214ENST00000496633 AVPR2P30518 371 aa8.05□□□□□ -1.12
CDHR3-214ENST00000496633 GDI1P31150 447 aa8.05□□□□□ -1.12
CDHR3-214ENST00000496633 CCR2P41597 374 aa8.05□□□□□ -1.12
CDHR3-214ENST00000496633 CDH8P55286 799 aa8.05□□□□□ -1.12
CDHR3-214ENST00000496633 CUL2Q13617 745 aa8.05□□□□□ -1.12
CDHR3-214ENST00000496633 MLF2Q15773 248 aaPredicted RBP8.05□□□□□ -1.12
CDHR3-214ENST00000496633 MEA1Q16626 185 aa8.05□□□□□ -1.12
CDHR3-214ENST00000496633 SLC44A4Q53GD3 710 aa8.05□□□□□ -1.12
CDHR3-214ENST00000496633 SNX30Q5VWJ9 437 aa8.05□□□□□ -1.12
CDHR3-214ENST00000496633 ISM2Q6H9L7 571 aa8.05□□□□□ -1.12
CDHR3-214ENST00000496633 TANGO2Q6ICL3 276 aa8.05□□□□□ -1.12
CDHR3-214ENST00000496633 SCARA5Q6ZMJ2 495 aa8.05□□□□□ -1.12
CDHR3-214ENST00000496633 GAREM2Q75VX8 874 aa8.05□□□□□ -1.12
CDHR3-214ENST00000496633 ACOT1Q86TX2 421 aa8.05□□□□□ -1.12
CDHR3-214ENST00000496633 FAM35AQ86V20 835 aa8.05□□□□□ -1.12
CDHR3-214ENST00000496633 RALGPS2Q86X27 583 aaPredicted RBP8.05□□□□□ -1.12
CDHR3-214ENST00000496633 TRIM59Q8IWR1 403 aa8.05□□□□□ -1.12
CDHR3-214ENST00000496633 ZNF276Q8N554 614 aa8.05□□□□□ -1.12
CDHR3-214ENST00000496633 GPR152Q8TDT2 470 aa8.05□□□□□ -1.12
CDHR3-214ENST00000496633 TCEAL4Q96EI5 215 aa8.05□□□□□ -1.12
CDHR3-214ENST00000496633 TMEM176AQ96HP8 235 aa8.05□□□□□ -1.12
CDHR3-214ENST00000496633 HEXIM2Q96MH2 286 aaKnown RBP8.05□□□□□ -1.12
CDHR3-214ENST00000496633 DUSP9Q99956 384 aaKnown RBP8.05□□□□□ -1.12
CDHR3-214ENST00000496633 KXD1Q9BQD3 176 aa8.05□□□□□ -1.12
CDHR3-214ENST00000496633 SMYD3Q9H7B4 428 aa8.05□□□□□ -1.12
CDHR3-214ENST00000496633 IL21Q9HBE4 155 aa8.05□□□□□ -1.12
CDHR3-214ENST00000496633 ZNF334Q9HCZ1 680 aaPredicted RBP8.05□□□□□ -1.12
CDHR3-214ENST00000496633 C11orf16Q9NQ32 467 aa8.05□□□□□ -1.12
CDHR3-214ENST00000496633 TLR8Q9NR97 1041 aaKnown RBP8.05□□□□□ -1.12
CDHR3-214ENST00000496633 CISHQ9NSE2 258 aa8.05□□□□□ -1.12
CDHR3-214ENST00000496633 LMBRD1Q9NUN5 540 aa8.05□□□□□ -1.12
CDHR3-214ENST00000496633 TMLHEQ9NVH6 421 aa8.05□□□□□ -1.12
CDHR3-214ENST00000496633 ANO10Q9NW15 660 aa8.05□□□□□ -1.12
CDHR3-214ENST00000496633 DAAM1Q9Y4D1 1078 aa8.05□□□□□ -1.12
CDHR3-214ENST00000496633 TECTAO75443 2155 aa8.05□□□□□ -1.12
CDHR3-214ENST00000496633 NOTCH4Q99466 2003 aa8.05□□□□□ -1.12
CDHR3-214ENST00000496633 FAM92AA1XBS5 289 aa8.04□□□□□ -1.12
CDHR3-214ENST00000496633 FAM86C2PA6NEL3 165 aa8.04□□□□□ -1.12
CDHR3-214ENST00000496633 MED7O43513 233 aa8.04□□□□□ -1.12
CDHR3-214ENST00000496633 SOAT2O75908 522 aa8.04□□□□□ -1.12
CDHR3-214ENST00000496633 VDRP11473 427 aa8.04□□□□□ -1.12
CDHR3-214ENST00000496633 CD44P16070 742 aaKnown RBP8.04□□□□□ -1.12
CDHR3-214ENST00000496633 NPR3P17342 541 aa8.04□□□□□ -1.12
CDHR3-214ENST00000496633 BMP6P22004 513 aa8.04□□□□□ -1.12
CDHR3-214ENST00000496633 FCARP24071 287 aa8.04□□□□□ -1.12
CDHR3-214ENST00000496633 RPS9P46781 194 aaKnown RBP8.04□□□□□ -1.12
CDHR3-214ENST00000496633 KPNA1P52294 538 aaPredicted RBP8.04□□□□□ -1.12
CDHR3-214ENST00000496633 PMS1P54277 932 aaKnown RBP8.04□□□□□ -1.12
CDHR3-214ENST00000496633 MFAP3P55082 362 aa8.04□□□□□ -1.12
CDHR3-214ENST00000496633 SNX16P57768 344 aa8.04□□□□□ -1.12
CDHR3-214ENST00000496633 KCNH2Q12809 1159 aa8.04□□□□□ -1.12
CDHR3-214ENST00000496633 LRRC32Q14392 662 aa8.04□□□□□ -1.12
CDHR3-214ENST00000496633 E2F5Q15329 346 aa8.04□□□□□ -1.12
CDHR3-214ENST00000496633 SGO2Q562F6 1265 aa8.04□□□□□ -1.12
CDHR3-214ENST00000496633 CCDC183Q5T5S1 534 aa8.04□□□□□ -1.12
CDHR3-214ENST00000496633 ARHGAP17Q68EM7 881 aa8.04□□□□□ -1.12
CDHR3-214ENST00000496633 KLHDC10Q6PID8 442 aa8.04□□□□□ -1.12
CDHR3-214ENST00000496633 VITQ6UXI7 678 aa8.04□□□□□ -1.12
CDHR3-214ENST00000496633 GBP6Q6ZN66 633 aa8.04□□□□□ -1.12
CDHR3-214ENST00000496633 NUDT18Q6ZVK8 323 aa8.04□□□□□ -1.12
CDHR3-214ENST00000496633 FUKQ8N0W3 1084 aa8.04□□□□□ -1.12
CDHR3-214ENST00000496633 PPM1KQ8N3J5 372 aa8.04□□□□□ -1.12
CDHR3-214ENST00000496633 SYNPOQ8N3V7 929 aa8.04□□□□□ -1.12
CDHR3-214ENST00000496633 CPA6Q8N4T0 437 aa8.04□□□□□ -1.12
CDHR3-214ENST00000496633 TTC9BQ8N6N2 239 aa8.04□□□□□ -1.12
CDHR3-214ENST00000496633 MAB21L3Q8N8X9 362 aa8.04□□□□□ -1.12
CDHR3-214ENST00000496633 ANKRD52Q8NB46 1076 aa8.04□□□□□ -1.12
CDHR3-214ENST00000496633 EHBP1Q8NDI1 1231 aa8.04□□□□□ -1.12
CDHR3-214ENST00000496633 FLCNQ8NFG4 579 aa8.04□□□□□ -1.12
CDHR3-214ENST00000496633 SLC2A14Q8TDB8 520 aa8.04□□□□□ -1.12
CDHR3-214ENST00000496633 RSAD2Q8WXG1 361 aa8.04□□□□□ -1.12
CDHR3-214ENST00000496633 ERCC4Q92889 916 aaPredicted RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms