RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 XPO1O14980 1071 aaKnown RBP9.08□□□□□ -0.96
U2AF1-212ENST00000496462 FSHRP23945 695 aa9.08□□□□□ -0.96
U2AF1-212ENST00000496462 SLC11A2P49281 568 aa9.08□□□□□ -0.96
U2AF1-212ENST00000496462 TKTL1P51854 596 aa9.08□□□□□ -0.96
U2AF1-212ENST00000496462 TCEAL5Q5H9L2 206 aa9.08□□□□□ -0.96
U2AF1-212ENST00000496462 FAM102AQ5T9C2 384 aaPredicted RBP9.08□□□□□ -0.96
U2AF1-212ENST00000496462 NAA35Q5VZE5 725 aa9.08□□□□□ -0.96
U2AF1-212ENST00000496462 ATAD1Q8NBU5 361 aa9.08□□□□□ -0.96
U2AF1-212ENST00000496462 GIPC2Q8TF65 315 aa9.08□□□□□ -0.96
U2AF1-212ENST00000496462 ZNF606Q8WXB4 792 aa9.08□□□□□ -0.96
U2AF1-212ENST00000496462 HAPLN2Q9GZV7 340 aa9.08□□□□□ -0.96
U2AF1-212ENST00000496462 KIF9Q9HAQ2 790 aa9.08□□□□□ -0.96
U2AF1-212ENST00000496462 PARVAQ9NVD7 372 aa9.08□□□□□ -0.96
U2AF1-212ENST00000496462 SIX4Q9UIU6 781 aa9.08□□□□□ -0.96
U2AF1-212ENST00000496462 INSL5Q9Y5Q6 135 aa9.08□□□□□ -0.96
U2AF1-212ENST00000496462 BRWD1Q9NSI6 2320 aa9.08□□□□□ -0.96
U2AF1-212ENST00000496462 SSU72P8A0A1W2PR75 194 aa9.08□□□□□ -0.96
U2AF1-212ENST00000496462 FOXN3O00409 490 aaPredicted RBP9.08□□□□□ -0.96
U2AF1-212ENST00000496462 RTN2O75298 545 aa9.08□□□□□ -0.96
U2AF1-212ENST00000496462 MOCS3O95396 460 aa9.08□□□□□ -0.96
U2AF1-212ENST00000496462 CNPP09543 421 aaKnown RBP9.08□□□□□ -0.96
U2AF1-212ENST00000496462 HAPLN1P10915 354 aaPredicted RBP9.08□□□□□ -0.96
U2AF1-212ENST00000496462 RPL17P18621 184 aaKnown RBP9.08□□□□□ -0.96
U2AF1-212ENST00000496462 SLC8B1Q6J4K2 584 aa9.08□□□□□ -0.96
U2AF1-212ENST00000496462 ALKBH5Q6P6C2 394 aaKnown RBP9.08□□□□□ -0.96
U2AF1-212ENST00000496462 CCDC186Q7Z3E2 898 aa9.08□□□□□ -0.96
U2AF1-212ENST00000496462 MON1AQ86VX9 555 aa9.08□□□□□ -0.96
U2AF1-212ENST00000496462 ATP6V0D2Q8N8Y2 350 aa9.08□□□□□ -0.96
U2AF1-212ENST00000496462 AUTS2Q8WXX7 1259 aa9.08□□□□□ -0.96
U2AF1-212ENST00000496462 BCO2Q9BYV7 579 aa9.08□□□□□ -0.96
U2AF1-212ENST00000496462 PNPLA8Q9NP80 782 aa9.08□□□□□ -0.96
U2AF1-212ENST00000496462 CNGB3Q9NQW8 809 aa9.08□□□□□ -0.96
U2AF1-212ENST00000496462 C2orf71A6NGG8 1288 aa9.07□□□□□ -0.96
U2AF1-212ENST00000496462 F8VP50 259 aa9.07□□□□□ -0.96
U2AF1-212ENST00000496462 F8VZ95 297 aa9.07□□□□□ -0.96
U2AF1-212ENST00000496462 CCL16O15467 120 aa9.07□□□□□ -0.96
U2AF1-212ENST00000496462 TEX33O43247 280 aa9.07□□□□□ -0.96
U2AF1-212ENST00000496462 MFAP3LO75121 409 aa9.07□□□□□ -0.96
U2AF1-212ENST00000496462 EDN1P05305 212 aa9.07□□□□□ -0.96
U2AF1-212ENST00000496462 CYP11B1P15538 503 aa9.07□□□□□ -0.96
U2AF1-212ENST00000496462 PFKLP17858 780 aa9.07□□□□□ -0.96
U2AF1-212ENST00000496462 GABRR2P28476 465 aa9.07□□□□□ -0.96
U2AF1-212ENST00000496462 KIF11P52732 1056 aa9.07□□□□□ -0.96
U2AF1-212ENST00000496462 INCA1Q0VD86 236 aa9.07□□□□□ -0.96
U2AF1-212ENST00000496462 NCAPHQ15003 741 aa9.07□□□□□ -0.96
U2AF1-212ENST00000496462 CFAP221Q4G0U5 840 aa9.07□□□□□ -0.96
U2AF1-212ENST00000496462 LCLAT1Q6UWP7 414 aa9.07□□□□□ -0.96
U2AF1-212ENST00000496462 UBA3Q8TBC4 463 aa9.07□□□□□ -0.96
U2AF1-212ENST00000496462 ZNF516Q92618 1163 aa9.07□□□□□ -0.96
U2AF1-212ENST00000496462 PRKD2Q9BZL6 878 aa9.07□□□□□ -0.96
U2AF1-212ENST00000496462 ABCC13Q9NSE7 274 aa9.07□□□□□ -0.96
U2AF1-212ENST00000496462 THEGQ9P2T0 379 aa9.07□□□□□ -0.96
U2AF1-212ENST00000496462 TJP2Q9UDY2 1190 aa9.07□□□□□ -0.96
U2AF1-212ENST00000496462 RASAL2Q9UJF2 1139 aa9.07□□□□□ -0.96
U2AF1-212ENST00000496462 SLC27A5Q9Y2P5 690 aa9.07□□□□□ -0.96
U2AF1-212ENST00000496462 CCDC195A0A1B0GUA6 201 aa9.07□□□□□ -0.96
U2AF1-212ENST00000496462 LCHNA4D1U4 455 aa9.07□□□□□ -0.96
U2AF1-212ENST00000496462 KIF2AO00139 706 aaPredicted RBP9.07□□□□□ -0.96
U2AF1-212ENST00000496462 VNN1O95497 513 aa9.07□□□□□ -0.96
U2AF1-212ENST00000496462 ZBED1O96006 694 aa9.07□□□□□ -0.96
U2AF1-212ENST00000496462 GZMAP12544 262 aa9.07□□□□□ -0.96
U2AF1-212ENST00000496462 KCNA5P22460 613 aa9.07□□□□□ -0.96
U2AF1-212ENST00000496462 HOXA9P31269 272 aa9.07□□□□□ -0.96
U2AF1-212ENST00000496462 ATP5C1P36542 298 aaKnown RBP9.07□□□□□ -0.96
U2AF1-212ENST00000496462 RTP2Q5QGT7 225 aa9.07□□□□□ -0.96
U2AF1-212ENST00000496462 SCYL2Q6P3W7 929 aa9.07□□□□□ -0.96
U2AF1-212ENST00000496462 PASD1Q8IV76 773 aa9.07□□□□□ -0.96
U2AF1-212ENST00000496462 BBS5Q8N3I7 341 aa9.07□□□□□ -0.96
U2AF1-212ENST00000496462 LNX1Q8TBB1 728 aaPredicted RBP9.07□□□□□ -0.96
U2AF1-212ENST00000496462 STK32AQ8WU08 396 aa9.07□□□□□ -0.96
U2AF1-212ENST00000496462 OVCA2Q8WZ82 227 aa9.07□□□□□ -0.96
U2AF1-212ENST00000496462 IRGQQ8WZA9 623 aa9.07□□□□□ -0.96
U2AF1-212ENST00000496462 NAP1L5Q96NT1 182 aaPredicted RBP9.07□□□□□ -0.96
U2AF1-212ENST00000496462 UBXN6Q9BZV1 441 aa9.07□□□□□ -0.96
U2AF1-212ENST00000496462 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.07□□□□□ -0.96
U2AF1-212ENST00000496462 TBC1D14Q9P2M4 693 aa9.07□□□□□ -0.96
U2AF1-212ENST00000496462 MTMR11A4FU01 709 aa9.07□□□□□ -0.96
U2AF1-212ENST00000496462 HSF2BPO75031 334 aa9.07□□□□□ -0.96
U2AF1-212ENST00000496462 GLI1P08151 1106 aa9.07□□□□□ -0.96
U2AF1-212ENST00000496462 RGS7P49802 495 aa9.07□□□□□ -0.96
U2AF1-212ENST00000496462 OXCT1P55809 520 aa9.07□□□□□ -0.96
U2AF1-212ENST00000496462 GPC5P78333 572 aa9.07□□□□□ -0.96
U2AF1-212ENST00000496462 DUSP6Q16828 381 aa9.07□□□□□ -0.96
U2AF1-212ENST00000496462 TMC5Q6UXY8 1006 aa9.07□□□□□ -0.96
U2AF1-212ENST00000496462 ARHGEF19Q8IW93 802 aa9.07□□□□□ -0.96
U2AF1-212ENST00000496462 UBL4BQ8N7F7 174 aa9.07□□□□□ -0.96
U2AF1-212ENST00000496462 VCPIP1Q96JH7 1222 aa9.07□□□□□ -0.96
U2AF1-212ENST00000496462 C11orf70Q9BRQ4 267 aa9.07□□□□□ -0.96
U2AF1-212ENST00000496462 MARCH5Q9NX47 278 aa9.07□□□□□ -0.96
U2AF1-212ENST00000496462 FBXL21Q9UKT6 434 aa9.07□□□□□ -0.96
U2AF1-212ENST00000496462 PER2O15055 1255 aa9.06□□□□□ -0.96
U2AF1-212ENST00000496462 PRPSAP2O60256 369 aa9.06□□□□□ -0.96
U2AF1-212ENST00000496462 CLASP2O75122 1294 aaKnown RBP9.06□□□□□ -0.96
U2AF1-212ENST00000496462 MICAL2O94851 1124 aa9.06□□□□□ -0.96
U2AF1-212ENST00000496462 HDCP19113 662 aa9.06□□□□□ -0.96
U2AF1-212ENST00000496462 NNMTP40261 264 aa9.06□□□□□ -0.96
U2AF1-212ENST00000496462 GPNMBQ14956 572 aa9.06□□□□□ -0.96
U2AF1-212ENST00000496462 SPRED2Q7Z698 418 aa9.06□□□□□ -0.96
U2AF1-212ENST00000496462 UCMAQ8WVF2 138 aa9.06□□□□□ -0.96
U2AF1-212ENST00000496462 SERPINB11Q96P15 392 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms