RNA–Protein interactions for RNA: ENST00000496335.1

PDAP1-204, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 302 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-204ENST00000496335 C2orf78A6NCI8 922 aa15.39■□□□□ 0.05
PDAP1-204ENST00000496335 SLC16A3O15427 465 aaKnown RBP15.39■□□□□ 0.05
PDAP1-204ENST00000496335 CCDC130P13994 396 aa15.39■□□□□ 0.05
PDAP1-204ENST00000496335 CD58P19256 250 aa15.39■□□□□ 0.05
PDAP1-204ENST00000496335 DDX6P26196 483 aaKnown RBP eCLIP15.39■□□□□ 0.055e-9■□□□□ 10.6
PDAP1-204ENST00000496335 TARSP26639 723 aaKnown RBP15.39■□□□□ 0.05
PDAP1-204ENST00000496335 CBWD6Q4V339 395 aa15.39■□□□□ 0.05
PDAP1-204ENST00000496335 CBWD3Q5JTY5 395 aa15.39■□□□□ 0.05
PDAP1-204ENST00000496335 CBWD5Q5RIA9 395 aa15.39■□□□□ 0.05
PDAP1-204ENST00000496335 ZNF852Q6ZMS4 543 aa15.39■□□□□ 0.05
PDAP1-204ENST00000496335 UNC93AQ86WB7 457 aa15.39■□□□□ 0.05
PDAP1-204ENST00000496335 FUKQ8N0W3 1084 aa15.39■□□□□ 0.05
PDAP1-204ENST00000496335 CRYBG2Q8N1P7 616 aa15.39■□□□□ 0.05
PDAP1-204ENST00000496335 C12orf29Q8N999 325 aa15.39■□□□□ 0.05
PDAP1-204ENST00000496335 FBXL13Q8NEE6 735 aa15.39■□□□□ 0.05
PDAP1-204ENST00000496335 RIN3Q8TB24 985 aa15.39■□□□□ 0.05
PDAP1-204ENST00000496335 NELFBQ8WX92 580 aa15.39■□□□□ 0.05
PDAP1-204ENST00000496335 ATOH1Q92858 354 aaPredicted RBP15.39■□□□□ 0.05
PDAP1-204ENST00000496335 CEP295NLQ96MC4 621 aa15.39■□□□□ 0.05
PDAP1-204ENST00000496335 NIF3L1Q9GZT8 377 aa15.39■□□□□ 0.05
PDAP1-204ENST00000496335 TRPV5Q9NQA5 729 aa15.39■□□□□ 0.05
PDAP1-204ENST00000496335 FAM49BQ9NUQ9 324 aa15.39■□□□□ 0.05
PDAP1-204ENST00000496335 TDP1Q9NUW8 608 aa15.39■□□□□ 0.05
PDAP1-204ENST00000496335 ZMYM5Q9UJ78 669 aa15.39■□□□□ 0.05
PDAP1-204ENST00000496335 PIAS3Q9Y6X2 628 aa15.39■□□□□ 0.05
PDAP1-204ENST00000496335 STX10O60499 249 aa15.38■□□□□ 0.05
PDAP1-204ENST00000496335 SOX9P48436 509 aa15.38■□□□□ 0.05
PDAP1-204ENST00000496335 STX17P56962 302 aa15.38■□□□□ 0.05
PDAP1-204ENST00000496335 TNK2Q07912 1038 aa15.38■□□□□ 0.05
PDAP1-204ENST00000496335 INCA1Q0VD86 236 aa15.38■□□□□ 0.05
PDAP1-204ENST00000496335 IFRD2Q12894 506 aaPredicted RBP15.38■□□□□ 0.05
PDAP1-204ENST00000496335 ARHGAP29Q52LW3 1261 aa15.38■□□□□ 0.05
PDAP1-204ENST00000496335 TTI2Q6NXR4 508 aa15.38■□□□□ 0.05
PDAP1-204ENST00000496335 ARL14EPQ8N8R7 260 aaPredicted RBP15.38■□□□□ 0.05
PDAP1-204ENST00000496335 CCDC150Q8NCX0 1101 aa15.38■□□□□ 0.05
PDAP1-204ENST00000496335 TTC16Q8NEE8 873 aa15.38■□□□□ 0.05
PDAP1-204ENST00000496335 SLC2A14Q8TDB8 520 aa15.38■□□□□ 0.05
PDAP1-204ENST00000496335 CSGALNACT1Q8TDX6 532 aa15.38■□□□□ 0.05
PDAP1-204ENST00000496335 WHAMMQ8TF30 809 aa15.38■□□□□ 0.05
PDAP1-204ENST00000496335 TATDN2Q93075 761 aa15.38■□□□□ 0.05
PDAP1-204ENST00000496335 TTLL2Q9BWV7 592 aa15.38■□□□□ 0.05
PDAP1-204ENST00000496335 CYP3A43Q9HB55 503 aa15.38■□□□□ 0.05
PDAP1-204ENST00000496335 RAB20Q9NX57 234 aa15.38■□□□□ 0.05
PDAP1-204ENST00000496335 GTSE1Q9NYZ3 720 aa15.38■□□□□ 0.05
PDAP1-204ENST00000496335 ARMCX3Q9UH62 379 aaPredicted RBP15.38■□□□□ 0.05
PDAP1-204ENST00000496335 NDRG2Q9UN36 371 aaKnown RBP15.38■□□□□ 0.05
PDAP1-204ENST00000496335 CTNND2Q9UQB3 1225 aa15.38■□□□□ 0.05
PDAP1-204ENST00000496335 ATP8B3O60423 1300 aa15.38■□□□□ 0.05
PDAP1-204ENST00000496335 SOBPA7XYQ1 873 aa15.37■□□□□ 0.05
PDAP1-204ENST00000496335 AP1G2O75843 785 aa15.37■□□□□ 0.05
PDAP1-204ENST00000496335 BEST1O76090 585 aa15.37■□□□□ 0.05
PDAP1-204ENST00000496335 PPP1R2P41236 205 aa15.37■□□□□ 0.05
PDAP1-204ENST00000496335 KPNA1P52294 538 aaPredicted RBP15.37■□□□□ 0.05
PDAP1-204ENST00000496335 TAF10Q12962 218 aa15.37■□□□□ 0.05
PDAP1-204ENST00000496335 FZD5Q13467 585 aa15.37■□□□□ 0.05
PDAP1-204ENST00000496335 ANGPT1Q15389 498 aa15.37■□□□□ 0.05
PDAP1-204ENST00000496335 NUP93Q8N1F7 819 aa15.37■□□□□ 0.05
PDAP1-204ENST00000496335 FAM3CQ92520 227 aa15.37■□□□□ 0.05
PDAP1-204ENST00000496335 SLC35C1Q96A29 364 aa15.37■□□□□ 0.05
PDAP1-204ENST00000496335 CEP63Q96MT8 703 aa15.37■□□□□ 0.05
PDAP1-204ENST00000496335 SMOQ99835 787 aa15.37■□□□□ 0.05
PDAP1-204ENST00000496335 ARID3AQ99856 593 aa15.37■□□□□ 0.05
PDAP1-204ENST00000496335 OSBPL6Q9BZF3 934 aa15.37■□□□□ 0.05
PDAP1-204ENST00000496335 GKN1Q9NS71 199 aa15.37■□□□□ 0.05
PDAP1-204ENST00000496335 KRT82Q9NSB4 513 aa15.37■□□□□ 0.05
PDAP1-204ENST00000496335 THG1LQ9NWX6 298 aaKnown RBP15.37■□□□□ 0.05
PDAP1-204ENST00000496335 TRPM5Q9NZQ8 1165 aa15.37■□□□□ 0.05
PDAP1-204ENST00000496335 GCNT4Q9P109 453 aa15.37■□□□□ 0.05
PDAP1-204ENST00000496335 HELZP42694 1942 aaKnown RBP15.37■□□□□ 0.05
PDAP1-204ENST00000496335 ZFHX2Q9C0A1 2572 aaPredicted RBP15.36■□□□□ 0.05
PDAP1-204ENST00000496335 TRAV19A0A0A6YYK7 116 aa15.36■□□□□ 0.05
PDAP1-204ENST00000496335 MAN2B1O00754 1011 aa15.36■□□□□ 0.05
PDAP1-204ENST00000496335 TNFRSF10BO14763 440 aa15.36■□□□□ 0.05
PDAP1-204ENST00000496335 CILPO75339 1184 aa15.36■□□□□ 0.05
PDAP1-204ENST00000496335 ABL1P00519 1130 aa15.36■□□□□ 0.05
PDAP1-204ENST00000496335 CKMP06732 381 aa15.36■□□□□ 0.05
PDAP1-204ENST00000496335 USP17L7P0C7H9 530 aa15.36■□□□□ 0.05
PDAP1-204ENST00000496335 HDCP19113 662 aa15.36■□□□□ 0.05
PDAP1-204ENST00000496335 ADORA2BP29275 332 aa15.36■□□□□ 0.05
PDAP1-204ENST00000496335 CCDC40Q4G0X9 1142 aa15.36■□□□□ 0.05
PDAP1-204ENST00000496335 ZNF394Q53GI3 561 aa15.36■□□□□ 0.05
PDAP1-204ENST00000496335 WDR44Q5JSH3 913 aa15.36■□□□□ 0.05
PDAP1-204ENST00000496335 TRIM68Q6AZZ1 485 aa15.36■□□□□ 0.05
PDAP1-204ENST00000496335 FILIP1Q7Z7B0 1213 aa15.36■□□□□ 0.05
PDAP1-204ENST00000496335 ALYREFQ86V81 257 aaKnown RBP15.36■□□□□ 0.05
PDAP1-204ENST00000496335 ZNF687Q8N1G0 1237 aa15.36■□□□□ 0.05
PDAP1-204ENST00000496335 ZMIZ2Q8NF64 920 aa15.36■□□□□ 0.05
PDAP1-204ENST00000496335 SCAMP5Q8TAC9 235 aa15.36■□□□□ 0.05
PDAP1-204ENST00000496335 SMARCD1Q96GM5 515 aa15.36■□□□□ 0.05
PDAP1-204ENST00000496335 NELL2Q99435 816 aa15.36■□□□□ 0.05
PDAP1-204ENST00000496335 FAM83CQ9BQN1 747 aa15.36■□□□□ 0.05
PDAP1-204ENST00000496335 NT5C1AQ9BXI3 368 aa15.36■□□□□ 0.05
PDAP1-204ENST00000496335 IRF2BPLQ9H1B7 796 aa15.36■□□□□ 0.05
PDAP1-204ENST00000496335 KIF9Q9HAQ2 790 aa15.36■□□□□ 0.05
PDAP1-204ENST00000496335 DMAP1Q9NPF5 467 aaPredicted RBP15.36■□□□□ 0.05
PDAP1-204ENST00000496335 EHD2Q9NZN4 543 aa15.36■□□□□ 0.05
PDAP1-204ENST00000496335 KIAA1468Q9P260 1216 aa15.36■□□□□ 0.05
PDAP1-204ENST00000496335 MRPS17Q9Y2R5 130 aaKnown RBP15.36■□□□□ 0.05
PDAP1-204ENST00000496335 COQ4Q9Y3A0 265 aa15.36■□□□□ 0.05
PDAP1-204ENST00000496335 VPS13AQ96RL7 3174 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms