RNA–Protein interactions for RNA: ENST00000496189.1

SF3A1-209, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-209ENST00000496189 ZSCAN23Q3MJ62 389 aa17.36■□□□□ 0.37
SF3A1-209ENST00000496189 ZNF394Q53GI3 561 aa17.36■□□□□ 0.37
SF3A1-209ENST00000496189 STXBP5Q5T5C0 1151 aa17.36■□□□□ 0.37
SF3A1-209ENST00000496189 C11orf57Q6ZUT1 292 aaPredicted RBP17.36■□□□□ 0.37
SF3A1-209ENST00000496189 ARID3BQ8IVW6 561 aaPredicted RBP17.36■□□□□ 0.37
SF3A1-209ENST00000496189 MFSD6LQ8IWD5 586 aa17.36■□□□□ 0.37
SF3A1-209ENST00000496189 PPM1KQ8N3J5 372 aa17.36■□□□□ 0.37
SF3A1-209ENST00000496189 CELF5Q8N6W0 485 aaKnown RBP17.36■□□□□ 0.37
SF3A1-209ENST00000496189 MAB21L3Q8N8X9 362 aa17.36■□□□□ 0.37
SF3A1-209ENST00000496189 STKLD1Q8NE28 680 aa17.36■□□□□ 0.37
SF3A1-209ENST00000496189 PDZD8Q8NEN9 1154 aa17.36■□□□□ 0.37
SF3A1-209ENST00000496189 TATDN2Q93075 761 aa17.36■□□□□ 0.37
SF3A1-209ENST00000496189 CYFIP2Q96F07 1278 aa17.36■□□□□ 0.37
SF3A1-209ENST00000496189 TMEM176AQ96HP8 235 aa17.36■□□□□ 0.37
SF3A1-209ENST00000496189 RPP25Q9BUL9 199 aaKnown RBP17.36■□□□□ 0.37
SF3A1-209ENST00000496189 KIF9Q9HAQ2 790 aa17.36■□□□□ 0.37
SF3A1-209ENST00000496189 ARHGEF3Q9NR81 526 aa17.36■□□□□ 0.37
SF3A1-209ENST00000496189 OBP2AQ9NY56 170 aa17.36■□□□□ 0.37
SF3A1-209ENST00000496189 HMGXB4Q9UGU5 601 aa17.36■□□□□ 0.37
SF3A1-209ENST00000496189 CA14Q9ULX7 337 aa17.36■□□□□ 0.37
SF3A1-209ENST00000496189 TRAV19A0A0A6YYK7 116 aa17.35■□□□□ 0.37
SF3A1-209ENST00000496189 SMTNL1A8MU46 457 aa17.35■□□□□ 0.37
SF3A1-209ENST00000496189 HEPACAM2A8MVW5 462 aa17.35■□□□□ 0.37
SF3A1-209ENST00000496189 ZNF263O14978 683 aa17.35■□□□□ 0.37
SF3A1-209ENST00000496189 CAVIN2O95810 425 aa17.35■□□□□ 0.37
SF3A1-209ENST00000496189 ABL1P00519 1130 aa17.35■□□□□ 0.37
SF3A1-209ENST00000496189 CKMP06732 381 aa17.35■□□□□ 0.37
SF3A1-209ENST00000496189 USP17L7P0C7H9 530 aa17.35■□□□□ 0.37
SF3A1-209ENST00000496189 CCDC130P13994 396 aa17.35■□□□□ 0.37
SF3A1-209ENST00000496189 YWHAQP27348 245 aa17.35■□□□□ 0.37
SF3A1-209ENST00000496189 VIPR2P41587 438 aa17.35■□□□□ 0.37
SF3A1-209ENST00000496189 GRM2Q14416 872 aa17.35■□□□□ 0.37
SF3A1-209ENST00000496189 MON1AQ86VX9 555 aa17.35■□□□□ 0.37
SF3A1-209ENST00000496189 IRF2BP1Q8IU81 584 aa17.35■□□□□ 0.37
SF3A1-209ENST00000496189 CMTM8Q8IZV2 173 aa17.35■□□□□ 0.37
SF3A1-209ENST00000496189 FUKQ8N0W3 1084 aa17.35■□□□□ 0.37
SF3A1-209ENST00000496189 FLCNQ8NFG4 579 aa17.35■□□□□ 0.37
SF3A1-209ENST00000496189 DNASE1L2Q92874 299 aa17.35■□□□□ 0.37
SF3A1-209ENST00000496189 FAM81BQ96LP2 452 aa17.35■□□□□ 0.37
SF3A1-209ENST00000496189 HNRNPABQ99729 332 aaKnown RBP17.35■□□□□ 0.37
SF3A1-209ENST00000496189 BPIFA3Q9BQP9 254 aa17.35■□□□□ 0.37
SF3A1-209ENST00000496189 FBXO44Q9H4M3 255 aa17.35■□□□□ 0.37
SF3A1-209ENST00000496189 COMMD8Q9NX08 183 aa17.35■□□□□ 0.37
SF3A1-209ENST00000496189 KCNJ18B7U540 433 aa17.34■□□□□ 0.37
SF3A1-209ENST00000496189 LRRN2O75325 713 aa17.34■□□□□ 0.37
SF3A1-209ENST00000496189 PFKLP17858 780 aa17.34■□□□□ 0.37
SF3A1-209ENST00000496189 FCARP24071 287 aa17.34■□□□□ 0.37
SF3A1-209ENST00000496189 GDI1P31150 447 aa17.34■□□□□ 0.37
SF3A1-209ENST00000496189 ZNF165P49910 485 aa17.34■□□□□ 0.37
SF3A1-209ENST00000496189 KCNJ12Q14500 433 aa17.34■□□□□ 0.37
SF3A1-209ENST00000496189 MAN2A1Q16706 1144 aa17.34■□□□□ 0.37
SF3A1-209ENST00000496189 ARHGAP29Q52LW3 1261 aa17.34■□□□□ 0.37
SF3A1-209ENST00000496189 TXNDC8Q6A555 127 aa17.34■□□□□ 0.37
SF3A1-209ENST00000496189 CC2D1AQ6P1N0 951 aaPredicted RBP17.34■□□□□ 0.37
SF3A1-209ENST00000496189 C12orf29Q8N999 325 aa17.34■□□□□ 0.37
SF3A1-209ENST00000496189 EHBP1Q8NDI1 1231 aa17.34■□□□□ 0.37
SF3A1-209ENST00000496189 BPIFB1Q8TDL5 484 aa17.34■□□□□ 0.37
SF3A1-209ENST00000496189 CSGALNACT1Q8TDX6 532 aa17.34■□□□□ 0.37
SF3A1-209ENST00000496189 OVCA2Q8WZ82 227 aa17.34■□□□□ 0.37
SF3A1-209ENST00000496189 FBXO32Q969P5 355 aa17.34■□□□□ 0.37
SF3A1-209ENST00000496189 PRRX2Q99811 253 aa17.34■□□□□ 0.37
SF3A1-209ENST00000496189 ARID3AQ99856 593 aa17.34■□□□□ 0.37
SF3A1-209ENST00000496189 TUBGCP2Q9BSJ2 902 aa17.34■□□□□ 0.37
SF3A1-209ENST00000496189 TTLL2Q9BWV7 592 aa17.34■□□□□ 0.37
SF3A1-209ENST00000496189 SAMSN1Q9NSI8 373 aaKnown RBP17.34■□□□□ 0.37
SF3A1-209ENST00000496189 TDP1Q9NUW8 608 aa17.34■□□□□ 0.37
SF3A1-209ENST00000496189 GCNT4Q9P109 453 aa17.34■□□□□ 0.37
SF3A1-209ENST00000496189 HESX1Q9UBX0 185 aa17.34■□□□□ 0.37
SF3A1-209ENST00000496189 PTPRDP23468 1912 aa17.33■□□□□ 0.37
SF3A1-209ENST00000496189 BECN2A8MW95 431 aa17.33■□□□□ 0.36
SF3A1-209ENST00000496189 PES1O00541 588 aaKnown RBP17.33■□□□□ 0.36
SF3A1-209ENST00000496189 CD19P15391 556 aa17.33■□□□□ 0.36
SF3A1-209ENST00000496189 COL9A1P20849 921 aa17.33■□□□□ 0.36
SF3A1-209ENST00000496189 CDK11BP21127 795 aaKnown RBP17.33■□□□□ 0.36
SF3A1-209ENST00000496189 SLC5A3P53794 718 aa17.33■□□□□ 0.36
SF3A1-209ENST00000496189 MAP3K7CLP57077 242 aa17.33■□□□□ 0.36
SF3A1-209ENST00000496189 PLCB2Q00722 1185 aa17.33■□□□□ 0.36
SF3A1-209ENST00000496189 PRKCQQ04759 706 aa17.33■□□□□ 0.36
SF3A1-209ENST00000496189 HSP90AA4PQ58FG1 418 aa17.33■□□□□ 0.36
SF3A1-209ENST00000496189 TCP11X2Q5H9J9 407 aa17.33■□□□□ 0.36
SF3A1-209ENST00000496189 VITQ6UXI7 678 aa17.33■□□□□ 0.36
SF3A1-209ENST00000496189 GBP6Q6ZN66 633 aa17.33■□□□□ 0.36
SF3A1-209ENST00000496189 TWNKQ96RR1 684 aa17.33■□□□□ 0.36
SF3A1-209ENST00000496189 KCNK16Q96T55 309 aa17.33■□□□□ 0.36
SF3A1-209ENST00000496189 SLC46A2Q9BY10 475 aa17.33■□□□□ 0.36
SF3A1-209ENST00000496189 PLA2G2FQ9BZM2 168 aa17.33■□□□□ 0.36
SF3A1-209ENST00000496189 FANCLQ9NW38 375 aa17.33■□□□□ 0.36
SF3A1-209ENST00000496189 KIAA1257Q9ULG3 409 aa17.33■□□□□ 0.36
SF3A1-209ENST00000496189 TECTAO75443 2155 aa17.32■□□□□ 0.36
SF3A1-209ENST00000496189 NRG2O14511 850 aaPredicted RBP17.32■□□□□ 0.36
SF3A1-209ENST00000496189 CHADO15335 359 aa17.32■□□□□ 0.36
SF3A1-209ENST00000496189 NPR3P17342 541 aa17.32■□□□□ 0.36
SF3A1-209ENST00000496189 CACNA2D1P54289 1103 aa17.32■□□□□ 0.36
SF3A1-209ENST00000496189 TPM4P67936 248 aa17.32■□□□□ 0.36
SF3A1-209ENST00000496189 GCNT1Q02742 428 aa17.32■□□□□ 0.36
SF3A1-209ENST00000496189 TAF10Q12962 218 aa17.32■□□□□ 0.36
SF3A1-209ENST00000496189 MLF2Q15773 248 aaPredicted RBP17.32■□□□□ 0.36
SF3A1-209ENST00000496189 VWA3BQ502W6 1294 aa17.32■□□□□ 0.36
SF3A1-209ENST00000496189 SLC44A4Q53GD3 710 aa17.32■□□□□ 0.36
SF3A1-209ENST00000496189 SGO2Q562F6 1265 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms