RNA–Protein interactions for RNA: ENST00000496071.5

COMMD3-214, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,150 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-214ENST00000496071 H0Y858 1186 aa18.12■□□□□ 0.49
COMMD3-214ENST00000496071 ARNTLO00327 626 aa18.12■□□□□ 0.49
COMMD3-214ENST00000496071 CLDN5O00501 218 aa18.12■□□□□ 0.49
COMMD3-214ENST00000496071 TADA3O75528 432 aa18.12■□□□□ 0.49
COMMD3-214ENST00000496071 PRAMEF12O95522 483 aa18.12■□□□□ 0.49
COMMD3-214ENST00000496071 DCNP07585 359 aaKnown RBP18.12■□□□□ 0.49
COMMD3-214ENST00000496071 USP17L7P0C7H9 530 aa18.12■□□□□ 0.49
COMMD3-214ENST00000496071 PFKLP17858 780 aa18.12■□□□□ 0.49
COMMD3-214ENST00000496071 INCA1Q0VD86 236 aa18.12■□□□□ 0.49
COMMD3-214ENST00000496071 TCERG1LQ5VWI1 586 aa18.12■□□□□ 0.49
COMMD3-214ENST00000496071 FILIP1Q7Z7B0 1213 aa18.12■□□□□ 0.49
COMMD3-214ENST00000496071 TTC39CQ8N584 583 aa18.12■□□□□ 0.49
COMMD3-214ENST00000496071 ATOH1Q92858 354 aaPredicted RBP18.12■□□□□ 0.49
COMMD3-214ENST00000496071 SMARCD1Q96GM5 515 aa18.12■□□□□ 0.49
COMMD3-214ENST00000496071 CEP63Q96MT8 703 aa18.12■□□□□ 0.49
COMMD3-214ENST00000496071 C8orf33Q9H7E9 229 aaPredicted RBP18.12■□□□□ 0.49
COMMD3-214ENST00000496071 RAB20Q9NX57 234 aa18.12■□□□□ 0.49
COMMD3-214ENST00000496071 TRPM5Q9NZQ8 1165 aa18.12■□□□□ 0.49
COMMD3-214ENST00000496071 DLGAP2Q9P1A6 1054 aa18.12■□□□□ 0.49
COMMD3-214ENST00000496071 RTN3O95197 1032 aaPredicted RBP18.11■□□□□ 0.49
COMMD3-214ENST00000496071 CD44P16070 742 aaKnown RBP18.11■□□□□ 0.49
COMMD3-214ENST00000496071 CD72P21854 359 aa18.11■□□□□ 0.49
COMMD3-214ENST00000496071 DCAF17Q5H9S7 520 aaPredicted RBP18.11■□□□□ 0.49
COMMD3-214ENST00000496071 WDR44Q5JSH3 913 aa18.11■□□□□ 0.49
COMMD3-214ENST00000496071 FRMD5Q7Z6J6 570 aa18.11■□□□□ 0.49
COMMD3-214ENST00000496071 FAM35AQ86V20 835 aa18.11■□□□□ 0.49
COMMD3-214ENST00000496071 NUP93Q8N1F7 819 aa18.11■□□□□ 0.49
COMMD3-214ENST00000496071 TRIML1Q8N9V2 468 aa18.11■□□□□ 0.49
COMMD3-214ENST00000496071 FAM3CQ92520 227 aa18.11■□□□□ 0.49
COMMD3-214ENST00000496071 USP13Q92995 863 aaPredicted RBP18.11■□□□□ 0.49
COMMD3-214ENST00000496071 LRRC3BQ96PB8 259 aa18.11■□□□□ 0.49
COMMD3-214ENST00000496071 SLITRK1Q96PX8 696 aa18.11■□□□□ 0.49
COMMD3-214ENST00000496071 NT5C1AQ9BXI3 368 aa18.11■□□□□ 0.49
COMMD3-214ENST00000496071 FAM124BQ9H5Z6 455 aaPredicted RBP18.11■□□□□ 0.49
COMMD3-214ENST00000496071 APOBEC3GQ9HC16 384 aaKnown RBP18.11■□□□□ 0.49
COMMD3-214ENST00000496071 DMAP1Q9NPF5 467 aaPredicted RBP18.11■□□□□ 0.49
COMMD3-214ENST00000496071 PIAS3Q9Y6X2 628 aa18.11■□□□□ 0.49
COMMD3-214ENST00000496071 PPP1R3GB7ZBB8 358 aa18.1■□□□□ 0.49
COMMD3-214ENST00000496071 BMP6P22004 513 aa18.1■□□□□ 0.49
COMMD3-214ENST00000496071 KPNA1P52294 538 aaPredicted RBP18.1■□□□□ 0.49
COMMD3-214ENST00000496071 CACNA2D1P54289 1103 aa18.1■□□□□ 0.49
COMMD3-214ENST00000496071 USP46P62068 366 aa18.1■□□□□ 0.49
COMMD3-214ENST00000496071 ANGPT1Q15389 498 aa18.1■□□□□ 0.49
COMMD3-214ENST00000496071 KLHL10Q6JEL2 608 aa18.1■□□□□ 0.49
COMMD3-214ENST00000496071 CC2D1AQ6P1N0 951 aaPredicted RBP18.1■□□□□ 0.49
COMMD3-214ENST00000496071 PAQR9Q6ZVX9 377 aa18.1■□□□□ 0.49
COMMD3-214ENST00000496071 FUKQ8N0W3 1084 aa18.1■□□□□ 0.49
COMMD3-214ENST00000496071 CLDN23Q96B33 292 aa18.1■□□□□ 0.49
COMMD3-214ENST00000496071 SMG9Q9H0W8 520 aaKnown RBP18.1■□□□□ 0.49
COMMD3-214ENST00000496071 TRPC7Q9HCX4 862 aa18.1■□□□□ 0.49
COMMD3-214ENST00000496071 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.1■□□□□ 0.49
COMMD3-214ENST00000496071 COMMD8Q9NX08 183 aa18.1■□□□□ 0.49
COMMD3-214ENST00000496071 COQ4Q9Y3A0 265 aa18.1■□□□□ 0.49
COMMD3-214ENST00000496071 MTF2Q9Y483 593 aaPredicted RBP18.1■□□□□ 0.49
COMMD3-214ENST00000496071 BIN1O00499 593 aa18.09■□□□□ 0.49
COMMD3-214ENST00000496071 CILPO75339 1184 aa18.09■□□□□ 0.49
COMMD3-214ENST00000496071 AP1G2O75843 785 aa18.09■□□□□ 0.49
COMMD3-214ENST00000496071 CKMP06732 381 aa18.09■□□□□ 0.49
COMMD3-214ENST00000496071 HDCP19113 662 aa18.09■□□□□ 0.49
COMMD3-214ENST00000496071 TARSP26639 723 aaKnown RBP18.09■□□□□ 0.49
COMMD3-214ENST00000496071 YWHAQP27348 245 aa18.09■□□□□ 0.49
COMMD3-214ENST00000496071 RPS9P46781 194 aaKnown RBP18.09■□□□□ 0.49
COMMD3-214ENST00000496071 RALGPS2Q86X27 583 aaPredicted RBP18.09■□□□□ 0.49
COMMD3-214ENST00000496071 PDZD8Q8NEN9 1154 aa18.09■□□□□ 0.49
COMMD3-214ENST00000496071 NELFBQ8WX92 580 aa18.09■□□□□ 0.49
COMMD3-214ENST00000496071 OVCA2Q8WZ82 227 aa18.09■□□□□ 0.49
COMMD3-214ENST00000496071 SEMA4DQ92854 862 aa18.09■□□□□ 0.49
COMMD3-214ENST00000496071 CYP2S1Q96SQ9 504 aa18.09■□□□□ 0.49
COMMD3-214ENST00000496071 KCNK16Q96T55 309 aa18.09■□□□□ 0.49
COMMD3-214ENST00000496071 GKN1Q9NS71 199 aa18.09■□□□□ 0.49
COMMD3-214ENST00000496071 TMEM30AQ9NV96 361 aa18.09■□□□□ 0.49
COMMD3-214ENST00000496071 GCNT4Q9P109 453 aa18.09■□□□□ 0.49
COMMD3-214ENST00000496071 KIAA1468Q9P260 1216 aa18.09■□□□□ 0.49
COMMD3-214ENST00000496071 HMGXB4Q9UGU5 601 aa18.09■□□□□ 0.49
COMMD3-214ENST00000496071 CCL26Q9Y258 94 aa18.09■□□□□ 0.49
COMMD3-214ENST00000496071 MYH10P35580 1976 aa18.09■□□□□ 0.49
COMMD3-214ENST00000496071 KIF26AQ9ULI4 1882 aaPredicted RBP18.09■□□□□ 0.49
COMMD3-214ENST00000496071 COL4A3Q01955 1670 aa18.09■□□□□ 0.49
COMMD3-214ENST00000496071 SHISA7A6NL88 538 aa18.08■□□□□ 0.48
COMMD3-214ENST00000496071 LRRN2O75325 713 aa18.08■□□□□ 0.48
COMMD3-214ENST00000496071 TCF3P15923 654 aa18.08■□□□□ 0.48
COMMD3-214ENST00000496071 TAF10Q12962 218 aa18.08■□□□□ 0.48
COMMD3-214ENST00000496071 ITPRIPL2Q3MIP1 535 aa18.08■□□□□ 0.48
COMMD3-214ENST00000496071 CCDC40Q4G0X9 1142 aa18.08■□□□□ 0.48
COMMD3-214ENST00000496071 TTI2Q6NXR4 508 aa18.08■□□□□ 0.48
COMMD3-214ENST00000496071 C1orf210Q8IVY1 113 aa18.08■□□□□ 0.48
COMMD3-214ENST00000496071 ARL14EPQ8N8R7 260 aaPredicted RBP18.08■□□□□ 0.48
COMMD3-214ENST00000496071 SLC2A14Q8TDB8 520 aa18.08■□□□□ 0.48
COMMD3-214ENST00000496071 SLC35C1Q96A29 364 aa18.08■□□□□ 0.48
COMMD3-214ENST00000496071 CYFIP2Q96F07 1278 aa18.08■□□□□ 0.48
COMMD3-214ENST00000496071 ZFYVE19Q96K21 471 aa18.08■□□□□ 0.48
COMMD3-214ENST00000496071 HNRNPABQ99729 332 aaKnown RBP18.08■□□□□ 0.48
COMMD3-214ENST00000496071 DUSP9Q99956 384 aaKnown RBP18.08■□□□□ 0.48
COMMD3-214ENST00000496071 FAM83CQ9BQN1 747 aa18.08■□□□□ 0.48
COMMD3-214ENST00000496071 CSNK1G1Q9HCP0 422 aa18.08■□□□□ 0.48
COMMD3-214ENST00000496071 KRT82Q9NSB4 513 aa18.08■□□□□ 0.48
COMMD3-214ENST00000496071 C2orf78A6NCI8 922 aa18.07■□□□□ 0.48
COMMD3-214ENST00000496071 ZNF840PA6NDX5 716 aa18.07■□□□□ 0.48
COMMD3-214ENST00000496071 FGFR1OPO95684 399 aaKnown RBP18.07■□□□□ 0.48
COMMD3-214ENST00000496071 GNA14O95837 355 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms