RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 CKMP06732 381 aa10.41□□□□□ -0.74
SMARCAL1-213ENST00000496037 JUPP14923 745 aa10.41□□□□□ -0.74
SMARCAL1-213ENST00000496037 KCNE1P15382 129 aa10.41□□□□□ -0.74
SMARCAL1-213ENST00000496037 ATF6P18850 670 aa10.41□□□□□ -0.74
SMARCAL1-213ENST00000496037 NMT1P30419 496 aaKnown RBP10.41□□□□□ -0.74
SMARCAL1-213ENST00000496037 ADSSP30520 456 aa10.41□□□□□ -0.74
SMARCAL1-213ENST00000496037 ADD1P35611 737 aaKnown RBP10.41□□□□□ -0.74
SMARCAL1-213ENST00000496037 OPRD1P41143 372 aa10.41□□□□□ -0.74
SMARCAL1-213ENST00000496037 GRM5P41594 1212 aa10.41□□□□□ -0.74
SMARCAL1-213ENST00000496037 SERPINB4P48594 390 aa10.41□□□□□ -0.74
SMARCAL1-213ENST00000496037 RARRES1P49788 294 aa10.41□□□□□ -0.74
SMARCAL1-213ENST00000496037 RCAN1P53805 252 aa10.41□□□□□ -0.74
SMARCAL1-213ENST00000496037 OSTNP61366 133 aa10.41□□□□□ -0.74
SMARCAL1-213ENST00000496037 CCDC173Q0VFZ6 552 aa10.41□□□□□ -0.74
SMARCAL1-213ENST00000496037 SUZ12Q15022 739 aaKnown RBP10.41□□□□□ -0.74
SMARCAL1-213ENST00000496037 ZNF77Q15935 545 aa10.41□□□□□ -0.74
SMARCAL1-213ENST00000496037 XKR4Q5GH76 650 aa10.41□□□□□ -0.74
SMARCAL1-213ENST00000496037 ATF7IP2Q5U623 682 aa10.41□□□□□ -0.74
SMARCAL1-213ENST00000496037 TXNDC8Q6A555 127 aa10.41□□□□□ -0.74
SMARCAL1-213ENST00000496037 ZNF662Q6ZS27 426 aa10.41□□□□□ -0.74
SMARCAL1-213ENST00000496037 EFCAB13Q8IY85 973 aa10.41□□□□□ -0.74
SMARCAL1-213ENST00000496037 MCPH1Q8NEM0 835 aa10.41□□□□□ -0.74
SMARCAL1-213ENST00000496037 FOXJ1Q92949 421 aa10.41□□□□□ -0.74
SMARCAL1-213ENST00000496037 C18orf25Q96B23 403 aaPredicted RBP10.41□□□□□ -0.74
SMARCAL1-213ENST00000496037 TRIM4Q9C037 500 aa10.41□□□□□ -0.74
SMARCAL1-213ENST00000496037 IL21RQ9HBE5 538 aa10.41□□□□□ -0.74
SMARCAL1-213ENST00000496037 ANKMY1Q9P2S6 941 aa10.41□□□□□ -0.74
SMARCAL1-213ENST00000496037 FNDC3AQ9Y2H6 1198 aaKnown RBP10.41□□□□□ -0.74
SMARCAL1-213ENST00000496037 PCDHGB2Q9Y5G2 931 aa10.41□□□□□ -0.74
SMARCAL1-213ENST00000496037 GOLGA4Q13439 2230 aaKnown RBP10.4□□□□□ -0.74
SMARCAL1-213ENST00000496037 IGHV1OR15-9A0A0B4J2B8 117 aa10.4□□□□□ -0.74
SMARCAL1-213ENST00000496037 A0A1B0GTW7 788 aa10.4□□□□□ -0.74
SMARCAL1-213ENST00000496037 MYMKA6NI61 221 aa10.4□□□□□ -0.74
SMARCAL1-213ENST00000496037 MEI4A8MW99 385 aa10.4□□□□□ -0.74
SMARCAL1-213ENST00000496037 M0QZQ0 153 aa10.4□□□□□ -0.74
SMARCAL1-213ENST00000496037 LARGE1O95461 756 aa10.4□□□□□ -0.74
SMARCAL1-213ENST00000496037 APODP05090 189 aa10.4□□□□□ -0.74
SMARCAL1-213ENST00000496037 CHMLP26374 656 aa10.4□□□□□ -0.74
SMARCAL1-213ENST00000496037 HSPA4P34932 840 aa10.4□□□□□ -0.74
SMARCAL1-213ENST00000496037 SLC19A1P41440 591 aa10.4□□□□□ -0.74
SMARCAL1-213ENST00000496037 UCNP55089 124 aa10.4□□□□□ -0.74
SMARCAL1-213ENST00000496037 TMPRSS3P57727 454 aa10.4□□□□□ -0.74
SMARCAL1-213ENST00000496037 NLRP12P59046 1061 aa10.4□□□□□ -0.74
SMARCAL1-213ENST00000496037 KCNH2Q12809 1159 aa10.4□□□□□ -0.74
SMARCAL1-213ENST00000496037 USP4Q13107 963 aa10.4□□□□□ -0.74
SMARCAL1-213ENST00000496037 PKDCCQ504Y2 493 aa10.4□□□□□ -0.74
SMARCAL1-213ENST00000496037 BROXQ5VW32 411 aa10.4□□□□□ -0.74
SMARCAL1-213ENST00000496037 OVOS1Q6IE37 1185 aa10.4□□□□□ -0.74
SMARCAL1-213ENST00000496037 MON1AQ86VX9 555 aa10.4□□□□□ -0.74
SMARCAL1-213ENST00000496037 SPACA3Q8IXA5 215 aa10.4□□□□□ -0.74
SMARCAL1-213ENST00000496037 SPATA18Q8TC71 538 aa10.4□□□□□ -0.74
SMARCAL1-213ENST00000496037 FGF11Q92914 225 aa10.4□□□□□ -0.74
SMARCAL1-213ENST00000496037 MED8Q96G25 268 aa10.4□□□□□ -0.74
SMARCAL1-213ENST00000496037 TMEM176AQ96HP8 235 aa10.4□□□□□ -0.74
SMARCAL1-213ENST00000496037 ZMAT2Q96NC0 199 aaKnown RBP10.4□□□□□ -0.74
SMARCAL1-213ENST00000496037 NACC1Q96RE7 527 aa10.4□□□□□ -0.74
SMARCAL1-213ENST00000496037 LGMNQ99538 433 aa10.4□□□□□ -0.74
SMARCAL1-213ENST00000496037 USB1Q9BQ65 265 aaKnown RBP10.4□□□□□ -0.74
SMARCAL1-213ENST00000496037 CCDC113Q9H0I3 377 aa10.4□□□□□ -0.74
SMARCAL1-213ENST00000496037 TRPC7Q9HCX4 862 aa10.4□□□□□ -0.74
SMARCAL1-213ENST00000496037 KCNMB3Q9NPA1 279 aa10.4□□□□□ -0.74
SMARCAL1-213ENST00000496037 CYP8B1Q9UNU6 501 aa10.4□□□□□ -0.74
SMARCAL1-213ENST00000496037 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.4□□□□□ -0.74
SMARCAL1-213ENST00000496037 NID2Q14112 1375 aa10.39□□□□□ -0.75
SMARCAL1-213ENST00000496037 RELNP78509 3460 aa10.39□□□□□ -0.75
SMARCAL1-213ENST00000496037 TRAV19A0A0A6YYK7 116 aa10.39□□□□□ -0.75
SMARCAL1-213ENST00000496037 SCAMP3O14828 347 aaKnown RBP10.39□□□□□ -0.75
SMARCAL1-213ENST00000496037 SLC27A2O14975 620 aa10.39□□□□□ -0.75
SMARCAL1-213ENST00000496037 SLITRK3O94933 977 aa10.39□□□□□ -0.75
SMARCAL1-213ENST00000496037 EDN1P05305 212 aa10.39□□□□□ -0.75
SMARCAL1-213ENST00000496037 GP1BBP13224 206 aa10.39□□□□□ -0.75
SMARCAL1-213ENST00000496037 ACTN2P35609 894 aa10.39□□□□□ -0.75
SMARCAL1-213ENST00000496037 GUCA2AQ02747 115 aa10.39□□□□□ -0.75
SMARCAL1-213ENST00000496037 ZNF568Q3ZCX4 644 aa10.39□□□□□ -0.75
SMARCAL1-213ENST00000496037 ARHGAP40Q5TG30 622 aa10.39□□□□□ -0.75
SMARCAL1-213ENST00000496037 ALKAL1Q6UXT8 129 aa10.39□□□□□ -0.75
SMARCAL1-213ENST00000496037 DSTYKQ6XUX3 929 aa10.39□□□□□ -0.75
SMARCAL1-213ENST00000496037 TRMT11Q7Z4G4 463 aaKnown RBP10.39□□□□□ -0.75
SMARCAL1-213ENST00000496037 TMEM150AQ86TG1 271 aa10.39□□□□□ -0.75
SMARCAL1-213ENST00000496037 ZCCHC9Q8N567 271 aaKnown RBP10.39□□□□□ -0.75
SMARCAL1-213ENST00000496037 CEP120Q8N960 986 aa10.39□□□□□ -0.75
SMARCAL1-213ENST00000496037 ZNF419Q96HQ0 510 aaPredicted RBP10.39□□□□□ -0.75
SMARCAL1-213ENST00000496037 TCEANC2Q96MN5 208 aa10.39□□□□□ -0.75
SMARCAL1-213ENST00000496037 ACAP3Q96P50 834 aa10.39□□□□□ -0.75
SMARCAL1-213ENST00000496037 PNKPQ96T60 521 aa10.39□□□□□ -0.75
SMARCAL1-213ENST00000496037 NRSN2Q9GZP1 204 aa10.39□□□□□ -0.75
SMARCAL1-213ENST00000496037 TMEM206Q9H813 350 aa10.39□□□□□ -0.75
SMARCAL1-213ENST00000496037 ZDHHC4Q9NPG8 344 aa10.39□□□□□ -0.75
SMARCAL1-213ENST00000496037 CNTN3Q9P232 1028 aa10.39□□□□□ -0.75
SMARCAL1-213ENST00000496037 PCDHA4Q9UN74 947 aa10.39□□□□□ -0.75
SMARCAL1-213ENST00000496037 ANKRD17O75179 2603 aaKnown RBP10.39□□□□□ -0.75
SMARCAL1-213ENST00000496037 TLDC2A0PJX2 215 aa10.38□□□□□ -0.75
SMARCAL1-213ENST00000496037 LZTS3O60299 673 aaPredicted RBP10.38□□□□□ -0.75
SMARCAL1-213ENST00000496037 ADAM23O75077 832 aa10.38□□□□□ -0.75
SMARCAL1-213ENST00000496037 KAT7O95251 611 aa10.38□□□□□ -0.75
SMARCAL1-213ENST00000496037 LYPLA2O95372 231 aa10.38□□□□□ -0.75
SMARCAL1-213ENST00000496037 F11P03951 625 aa10.38□□□□□ -0.75
SMARCAL1-213ENST00000496037 USP17L7P0C7H9 530 aa10.38□□□□□ -0.75
SMARCAL1-213ENST00000496037 GCFC2P16383 781 aaKnown RBP10.38□□□□□ -0.75
SMARCAL1-213ENST00000496037 GABRG2P18507 467 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms