RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-233ENST00000495899 DENND5BQ6ZUT9 1274 aa13.14□□□□□ -0.31
MRPL55-233ENST00000495899 PAQR9Q6ZVX9 377 aa13.14□□□□□ -0.31
MRPL55-233ENST00000495899 TMEM150AQ86TG1 271 aa13.14□□□□□ -0.31
MRPL55-233ENST00000495899 FBXL6Q8N531 539 aa13.14□□□□□ -0.31
MRPL55-233ENST00000495899 DEPDC1BQ8WUY9 529 aa13.14□□□□□ -0.31
MRPL55-233ENST00000495899 MRPS31Q92665 395 aaKnown RBP13.14□□□□□ -0.31
MRPL55-233ENST00000495899 KXD1Q9BQD3 176 aa13.14□□□□□ -0.31
MRPL55-233ENST00000495899 TTLL2Q9BWV7 592 aa13.14□□□□□ -0.31
MRPL55-233ENST00000495899 ZNF518BQ9C0D4 1074 aa13.14□□□□□ -0.31
MRPL55-233ENST00000495899 OBP2AQ9NY56 170 aa13.14□□□□□ -0.31
MRPL55-233ENST00000495899 FBXL21Q9UKT6 434 aa13.14□□□□□ -0.31
MRPL55-233ENST00000495899 MAGED2Q9UNF1 606 aaPredicted RBP13.14□□□□□ -0.31
MRPL55-233ENST00000495899 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.14□□□□□ -0.31
MRPL55-233ENST00000495899 F8VP50 259 aa13.13□□□□□ -0.31
MRPL55-233ENST00000495899 CFHP08603 1231 aa13.13□□□□□ -0.31
MRPL55-233ENST00000495899 PSMC3P17980 439 aa13.13□□□□□ -0.31
MRPL55-233ENST00000495899 TBXAS1P24557 533 aaPredicted RBP13.13□□□□□ -0.31
MRPL55-233ENST00000495899 YWHAEP62258 255 aaKnown RBP13.13□□□□□ -0.31
MRPL55-233ENST00000495899 GPC5P78333 572 aa13.13□□□□□ -0.31
MRPL55-233ENST00000495899 KCNH2Q12809 1159 aa13.13□□□□□ -0.31
MRPL55-233ENST00000495899 DPCR1Q3MIW9 517 aa13.13□□□□□ -0.31
MRPL55-233ENST00000495899 FAM35AQ86V20 835 aa13.13□□□□□ -0.31
MRPL55-233ENST00000495899 MON1AQ86VX9 555 aa13.13□□□□□ -0.31
MRPL55-233ENST00000495899 ARID3BQ8IVW6 561 aaPredicted RBP13.13□□□□□ -0.31
MRPL55-233ENST00000495899 MFSD6LQ8IWD5 586 aa13.13□□□□□ -0.31
MRPL55-233ENST00000495899 SUGP1Q8IWZ8 645 aaKnown RBP13.13□□□□□ -0.31
MRPL55-233ENST00000495899 FUKQ8N0W3 1084 aa13.13□□□□□ -0.31
MRPL55-233ENST00000495899 WHAMMQ8TF30 809 aa13.13□□□□□ -0.31
MRPL55-233ENST00000495899 TATDN2Q93075 761 aa13.13□□□□□ -0.31
MRPL55-233ENST00000495899 SMARCD1Q96GM5 515 aa13.13□□□□□ -0.31
MRPL55-233ENST00000495899 MED15Q96RN5 788 aa13.13□□□□□ -0.31
MRPL55-233ENST00000495899 HNRNPABQ99729 332 aaKnown RBP13.13□□□□□ -0.31
MRPL55-233ENST00000495899 MED10Q9BTT4 135 aa13.13□□□□□ -0.31
MRPL55-233ENST00000495899 TRMT61BQ9BVS5 477 aaKnown RBP13.13□□□□□ -0.31
MRPL55-233ENST00000495899 SLC46A2Q9BY10 475 aa13.13□□□□□ -0.31
MRPL55-233ENST00000495899 PLA2G2FQ9BZM2 168 aa13.13□□□□□ -0.31
MRPL55-233ENST00000495899 CSNK1G1Q9HCP0 422 aa13.13□□□□□ -0.31
MRPL55-233ENST00000495899 DMAP1Q9NPF5 467 aaPredicted RBP13.13□□□□□ -0.31
MRPL55-233ENST00000495899 TRPV5Q9NQA5 729 aa13.13□□□□□ -0.31
MRPL55-233ENST00000495899 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.13□□□□□ -0.312e-6■■■■■ 165.1
MRPL55-233ENST00000495899 CISHQ9NSE2 258 aa13.13□□□□□ -0.31
MRPL55-233ENST00000495899 COMMD8Q9NX08 183 aa13.13□□□□□ -0.31
MRPL55-233ENST00000495899 HMGXB4Q9UGU5 601 aa13.13□□□□□ -0.31
MRPL55-233ENST00000495899 NOTCH4Q99466 2003 aa13.13□□□□□ -0.31
MRPL55-233ENST00000495899 CLDN5O00501 218 aa13.12□□□□□ -0.31
MRPL55-233ENST00000495899 RTN3O95197 1032 aaPredicted RBP13.12□□□□□ -0.31
MRPL55-233ENST00000495899 AFPP02771 609 aaKnown RBP13.12□□□□□ -0.31
MRPL55-233ENST00000495899 PFKLP17858 780 aa13.12□□□□□ -0.31
MRPL55-233ENST00000495899 CD58P19256 250 aa13.12□□□□□ -0.31
MRPL55-233ENST00000495899 VIPR2P41587 438 aa13.12□□□□□ -0.31
MRPL55-233ENST00000495899 PDE6CP51160 858 aa13.12□□□□□ -0.31
MRPL55-233ENST00000495899 CACNA2D1P54289 1103 aa13.12□□□□□ -0.31
MRPL55-233ENST00000495899 CUL2Q13617 745 aa13.12□□□□□ -0.31
MRPL55-233ENST00000495899 STXBP5Q5T5C0 1151 aa13.12□□□□□ -0.31
MRPL55-233ENST00000495899 CMTM8Q8IZV2 173 aa13.12□□□□□ -0.31
MRPL55-233ENST00000495899 NUP93Q8N1F7 819 aa13.12□□□□□ -0.31
MRPL55-233ENST00000495899 C12orf29Q8N999 325 aa13.12□□□□□ -0.31
MRPL55-233ENST00000495899 EHBP1Q8NDI1 1231 aa13.12□□□□□ -0.31
MRPL55-233ENST00000495899 ST13P5Q8NFI4 369 aaPredicted RBP13.12□□□□□ -0.31
MRPL55-233ENST00000495899 SLC2A14Q8TDB8 520 aa13.12□□□□□ -0.31
MRPL55-233ENST00000495899 IRF7Q92985 503 aa13.12□□□□□ -0.31
MRPL55-233ENST00000495899 CYFIP2Q96F07 1278 aa13.12□□□□□ -0.31
MRPL55-233ENST00000495899 TMEM176AQ96HP8 235 aa13.12□□□□□ -0.31
MRPL55-233ENST00000495899 SHDQ96IW2 340 aa13.12□□□□□ -0.31
MRPL55-233ENST00000495899 KCNK16Q96T55 309 aa13.12□□□□□ -0.31
MRPL55-233ENST00000495899 MFSD1Q9H3U5 465 aa13.12□□□□□ -0.31
MRPL55-233ENST00000495899 THAP9Q9H5L6 903 aa13.12□□□□□ -0.31
MRPL55-233ENST00000495899 HEPACAM2A8MVW5 462 aa13.11□□□□□ -0.31
MRPL55-233ENST00000495899 AP1G2O75843 785 aa13.11□□□□□ -0.31
MRPL55-233ENST00000495899 AVPR1AP37288 418 aa13.11□□□□□ -0.31
MRPL55-233ENST00000495899 CLCN5P51795 746 aa13.11□□□□□ -0.31
MRPL55-233ENST00000495899 CYP4F8P98187 520 aa13.11□□□□□ -0.31
MRPL55-233ENST00000495899 FCHO2Q0JRZ9 810 aa13.11□□□□□ -0.31
MRPL55-233ENST00000495899 TPD52L1Q16890 204 aaPredicted RBP13.11□□□□□ -0.31
MRPL55-233ENST00000495899 TXNDC8Q6A555 127 aa13.11□□□□□ -0.31
MRPL55-233ENST00000495899 PHLDB3Q6NSJ2 640 aa13.11□□□□□ -0.31
MRPL55-233ENST00000495899 VITQ6UXI7 678 aa13.11□□□□□ -0.31
MRPL55-233ENST00000495899 IRF2BP1Q8IU81 584 aa13.11□□□□□ -0.31
MRPL55-233ENST00000495899 FAM114A1Q8IWE2 563 aa13.11□□□□□ -0.31
MRPL55-233ENST00000495899 SIX5Q8N196 739 aa13.11□□□□□ -0.31
MRPL55-233ENST00000495899 CELF5Q8N6W0 485 aaKnown RBP13.11□□□□□ -0.31
MRPL55-233ENST00000495899 LMO3Q8TAP4 145 aa13.11□□□□□ -0.31
MRPL55-233ENST00000495899 OVCA2Q8WZ82 227 aa13.11□□□□□ -0.31
MRPL55-233ENST00000495899 DNASE1L2Q92874 299 aa13.11□□□□□ -0.31
MRPL55-233ENST00000495899 CNOT6LQ96LI5 555 aaKnown RBP13.11□□□□□ -0.31
MRPL55-233ENST00000495899 HEXIM2Q96MH2 286 aaKnown RBP13.11□□□□□ -0.31
MRPL55-233ENST00000495899 NT5C1BQ96P26 610 aa13.11□□□□□ -0.31
MRPL55-233ENST00000495899 TWNKQ96RR1 684 aa13.11□□□□□ -0.31
MRPL55-233ENST00000495899 KCNH6Q9H252 994 aa13.11□□□□□ -0.31
MRPL55-233ENST00000495899 TMEM30AQ9NV96 361 aa13.11□□□□□ -0.31
MRPL55-233ENST00000495899 IL37Q9NZH6 218 aa13.11□□□□□ -0.31
MRPL55-233ENST00000495899 TRPM5Q9NZQ8 1165 aa13.11□□□□□ -0.31
MRPL55-233ENST00000495899 KIAA1257Q9ULG3 409 aa13.11□□□□□ -0.31
MRPL55-233ENST00000495899 DOCK8Q8NF50 2099 aa13.1□□□□□ -0.31
MRPL55-233ENST00000495899 KRBA1A5PL33 1030 aa13.1□□□□□ -0.31
MRPL55-233ENST00000495899 TNFRSF10BO14763 440 aa13.1□□□□□ -0.31
MRPL55-233ENST00000495899 ZNF263O14978 683 aa13.1□□□□□ -0.31
MRPL55-233ENST00000495899 CHADO15335 359 aa13.1□□□□□ -0.31
MRPL55-233ENST00000495899 FAM200BP0CF97 657 aa13.1□□□□□ -0.31
MRPL55-233ENST00000495899 CCDC130P13994 396 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms