RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 ZFYVE19Q96K21 471 aa25.79■■□□□ 1.72
HLA-C-209ENST00000495835 SMG9Q9H0W8 520 aaKnown RBP25.79■■□□□ 1.72
HLA-C-209ENST00000495835 DPEP3Q9H4B8 488 aa25.79■■□□□ 1.72
HLA-C-209ENST00000495835 PRMT8Q9NR22 394 aaPredicted RBP25.79■■□□□ 1.72
HLA-C-209ENST00000495835 GCNT4Q9P109 453 aa25.79■■□□□ 1.72
HLA-C-209ENST00000495835 CCL26Q9Y258 94 aa25.79■■□□□ 1.72
HLA-C-209ENST00000495835 F8VP50 259 aa25.78■■□□□ 1.72
HLA-C-209ENST00000495835 LMNAP02545 664 aaKnown RBP25.78■■□□□ 1.72
HLA-C-209ENST00000495835 TRIM21P19474 475 aaKnown RBP25.78■■□□□ 1.72
HLA-C-209ENST00000495835 GTF2H1P32780 548 aa25.78■■□□□ 1.72
HLA-C-209ENST00000495835 CDH8P55286 799 aa25.78■■□□□ 1.72
HLA-C-209ENST00000495835 MTAPQ13126 283 aa25.78■■□□□ 1.72
HLA-C-209ENST00000495835 RUNX3Q13761 415 aa25.78■■□□□ 1.72
HLA-C-209ENST00000495835 PDGFRLQ15198 375 aa25.78■■□□□ 1.72
HLA-C-209ENST00000495835 ELOA2Q8IYF1 753 aaPredicted RBP25.78■■□□□ 1.72
HLA-C-209ENST00000495835 KIAA1958Q8N8K9 716 aa25.78■■□□□ 1.72
HLA-C-209ENST00000495835 SPATA20Q8TB22 786 aa25.78■■□□□ 1.72
HLA-C-209ENST00000495835 B3GNT5Q9BYG0 378 aa25.78■■□□□ 1.72
HLA-C-209ENST00000495835 IMPG2Q9BZV3 1241 aa25.78■■□□□ 1.72
HLA-C-209ENST00000495835 SMYD3Q9H7B4 428 aa25.78■■□□□ 1.72
HLA-C-209ENST00000495835 PCDHGA2Q9Y5H1 932 aa25.78■■□□□ 1.72
HLA-C-209ENST00000495835 RIF1Q5UIP0 2472 aaKnown RBP25.78■■□□□ 1.72
HLA-C-209ENST00000495835 CFAP54Q96N23 3096 aa25.77■■□□□ 1.72
HLA-C-209ENST00000495835 SMC2O95347 1197 aa25.77■■□□□ 1.72
HLA-C-209ENST00000495835 CKMP06732 381 aa25.77■■□□□ 1.72
HLA-C-209ENST00000495835 HDCP19113 662 aa25.77■■□□□ 1.72
HLA-C-209ENST00000495835 CCR3P51677 355 aa25.77■■□□□ 1.72
HLA-C-209ENST00000495835 CSTF1Q05048 431 aaKnown RBP25.77■■□□□ 1.72
HLA-C-209ENST00000495835 ZNF658Q5TYW1 1059 aaPredicted RBP25.77■■□□□ 1.72
HLA-C-209ENST00000495835 CRYBG2Q8N1P7 616 aa25.77■■□□□ 1.72
HLA-C-209ENST00000495835 FAXDC2Q96IV6 333 aa25.77■■□□□ 1.72
HLA-C-209ENST00000495835 TRPC7Q9HCX4 862 aa25.77■■□□□ 1.72
HLA-C-209ENST00000495835 COMMD8Q9NX08 183 aa25.77■■□□□ 1.72
HLA-C-209ENST00000495835 R4GN57 208 aa25.77■■□□□ 1.72
HLA-C-209ENST00000495835 WDR87Q6ZQQ6 2873 aa25.76■■□□□ 1.71
HLA-C-209ENST00000495835 CLSTN1O94985 981 aa25.76■■□□□ 1.71
HLA-C-209ENST00000495835 RTN3O95197 1032 aaPredicted RBP25.76■■□□□ 1.71
HLA-C-209ENST00000495835 HLA-DRAP01903 254 aa25.76■■□□□ 1.71
HLA-C-209ENST00000495835 PIK3CAP42336 1068 aa25.76■■□□□ 1.71
HLA-C-209ENST00000495835 NRLP54845 237 aa25.76■■□□□ 1.71
HLA-C-209ENST00000495835 TNK2Q07912 1038 aa25.76■■□□□ 1.71
HLA-C-209ENST00000495835 PNOCQ13519 176 aa25.76■■□□□ 1.71
HLA-C-209ENST00000495835 SPEM1Q8N4L4 309 aa25.76■■□□□ 1.71
HLA-C-209ENST00000495835 ZBTB44Q8NCP5 570 aa25.76■■□□□ 1.71
HLA-C-209ENST00000495835 PDZD8Q8NEN9 1154 aa25.76■■□□□ 1.71
HLA-C-209ENST00000495835 OVCA2Q8WZ82 227 aa25.76■■□□□ 1.71
HLA-C-209ENST00000495835 EXOC4Q96A65 974 aa25.76■■□□□ 1.71
HLA-C-209ENST00000495835 SLITRK1Q96PX8 696 aa25.76■■□□□ 1.71
HLA-C-209ENST00000495835 CYP2S1Q96SQ9 504 aa25.76■■□□□ 1.71
HLA-C-209ENST00000495835 ZNF518BQ9C0D4 1074 aa25.76■■□□□ 1.71
HLA-C-209ENST00000495835 CYP3A43Q9HB55 503 aa25.76■■□□□ 1.71
HLA-C-209ENST00000495835 ZSCAN32Q9NX65 697 aa25.76■■□□□ 1.71
HLA-C-209ENST00000495835 ARHGAP26Q9UNA1 814 aa25.76■■□□□ 1.71
HLA-C-209ENST00000495835 FAM186AA6NE01 2351 aa25.76■■□□□ 1.71
HLA-C-209ENST00000495835 CETN3O15182 167 aa25.75■■□□□ 1.71
HLA-C-209ENST00000495835 KINO60870 393 aaKnown RBP25.75■■□□□ 1.71
HLA-C-209ENST00000495835 SOX9P48436 509 aa25.75■■□□□ 1.71
HLA-C-209ENST00000495835 USP46P62068 366 aa25.75■■□□□ 1.71
HLA-C-209ENST00000495835 USP4Q13107 963 aa25.75■■□□□ 1.71
HLA-C-209ENST00000495835 MTF1Q14872 753 aa25.75■■□□□ 1.71
HLA-C-209ENST00000495835 ZNF77Q15935 545 aa25.75■■□□□ 1.71
HLA-C-209ENST00000495835 NUP93Q8N1F7 819 aa25.75■■□□□ 1.71
HLA-C-209ENST00000495835 ARL14EPQ8N8R7 260 aaPredicted RBP25.75■■□□□ 1.71
HLA-C-209ENST00000495835 DNAI2Q9GZS0 605 aa25.75■■□□□ 1.71
HLA-C-209ENST00000495835 SDCBP2Q9H190 292 aa25.75■■□□□ 1.71
HLA-C-209ENST00000495835 TMEM8AQ9HCN3 771 aa25.75■■□□□ 1.71
HLA-C-209ENST00000495835 HPS4Q9NQG7 708 aa25.75■■□□□ 1.71
HLA-C-209ENST00000495835 PTPRZ1P23471 2315 aaPredicted RBP25.74■■□□□ 1.71
HLA-C-209ENST00000495835 C2orf78A6NCI8 922 aa25.74■■□□□ 1.71
HLA-C-209ENST00000495835 ZNF840PA6NDX5 716 aa25.74■■□□□ 1.71
HLA-C-209ENST00000495835 STX10O60499 249 aa25.74■■□□□ 1.71
HLA-C-209ENST00000495835 TXNDC11Q6PKC3 985 aa25.74■■□□□ 1.71
HLA-C-209ENST00000495835 SCARA5Q6ZMJ2 495 aa25.74■■□□□ 1.71
HLA-C-209ENST00000495835 CCDC150Q8NCX0 1101 aa25.74■■□□□ 1.71
HLA-C-209ENST00000495835 OSCP1Q8WVF1 389 aa25.74■■□□□ 1.71
HLA-C-209ENST00000495835 ATRIPQ8WXE1 791 aa25.74■■□□□ 1.71
HLA-C-209ENST00000495835 SMARCD1Q96GM5 515 aa25.74■■□□□ 1.71
HLA-C-209ENST00000495835 SLC22A12Q96S37 553 aa25.74■■□□□ 1.71
HLA-C-209ENST00000495835 HELZP42694 1942 aaKnown RBP25.74■■□□□ 1.71
HLA-C-209ENST00000495835 CLDN5O00501 218 aa25.73■■□□□ 1.71
HLA-C-209ENST00000495835 PAPSS2O95340 614 aaPredicted RBP25.73■■□□□ 1.71
HLA-C-209ENST00000495835 PRCPP42785 496 aa25.73■■□□□ 1.71
HLA-C-209ENST00000495835 ASPAP45381 313 aa25.73■■□□□ 1.71
HLA-C-209ENST00000495835 RAP1GAPP47736 663 aa25.73■■□□□ 1.71
HLA-C-209ENST00000495835 CXCL12P48061 93 aa25.73■■□□□ 1.71
HLA-C-209ENST00000495835 GCLMP48507 274 aa25.73■■□□□ 1.71
HLA-C-209ENST00000495835 CACNA2D1P54289 1103 aa25.73■■□□□ 1.71
HLA-C-209ENST00000495835 SLC7A9P82251 487 aa25.73■■□□□ 1.71
HLA-C-209ENST00000495835 PPP3CAQ08209 521 aa25.73■■□□□ 1.71
HLA-C-209ENST00000495835 INCA1Q0VD86 236 aa25.73■■□□□ 1.71
HLA-C-209ENST00000495835 CCINQ13939 588 aa25.73■■□□□ 1.71
HLA-C-209ENST00000495835 KRT39Q6A163 491 aa25.73■■□□□ 1.71
HLA-C-209ENST00000495835 PAQR9Q6ZVX9 377 aa25.73■■□□□ 1.71
HLA-C-209ENST00000495835 FAM35AQ86V20 835 aa25.73■■□□□ 1.71
HLA-C-209ENST00000495835 SMARCE1Q969G3 411 aa25.73■■□□□ 1.71
HLA-C-209ENST00000495835 EBF3Q9H4W6 596 aa25.73■■□□□ 1.71
HLA-C-209ENST00000495835 FAM124BQ9H5Z6 455 aaPredicted RBP25.73■■□□□ 1.71
HLA-C-209ENST00000495835 DMAP1Q9NPF5 467 aaPredicted RBP25.73■■□□□ 1.71
HLA-C-209ENST00000495835 TMEM30AQ9NV96 361 aa25.73■■□□□ 1.71
HLA-C-209ENST00000495835 IL37Q9NZH6 218 aa25.73■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms