RNA–Protein interactions for RNA: ENST00000495784.1

CLCNKA-207, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 727 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-207ENST00000495784 EGFP01133 1207 aa19.65■□□□□ 0.74
CLCNKA-207ENST00000495784 DRD1P21728 446 aa19.65■□□□□ 0.74
CLCNKA-207ENST00000495784 GJA4P35212 333 aa19.65■□□□□ 0.74
CLCNKA-207ENST00000495784 KNOP1Q1ED39 458 aaKnown RBP19.65■□□□□ 0.74
CLCNKA-207ENST00000495784 PKN3Q6P5Z2 889 aa19.65■□□□□ 0.74
CLCNKA-207ENST00000495784 WDR5BQ86VZ2 330 aa19.65■□□□□ 0.74
CLCNKA-207ENST00000495784 GOLGA5Q8TBA6 731 aa19.65■□□□□ 0.74
CLCNKA-207ENST00000495784 NXF1Q9UBU9 619 aaKnown RBP19.65■□□□□ 0.74
CLCNKA-207ENST00000495784 ARHGAP26Q9UNA1 814 aa19.65■□□□□ 0.74
CLCNKA-207ENST00000495784 F8VP50 259 aa19.64■□□□□ 0.73
CLCNKA-207ENST00000495784 LRP3O75074 770 aa19.64■□□□□ 0.73
CLCNKA-207ENST00000495784 RNF40O75150 1001 aa19.64■□□□□ 0.73
CLCNKA-207ENST00000495784 FAM163BP0C2L3 166 aa19.64■□□□□ 0.73
CLCNKA-207ENST00000495784 GALK1P51570 392 aa19.64■□□□□ 0.73
CLCNKA-207ENST00000495784 MYL6P60660 151 aa19.64■□□□□ 0.73
CLCNKA-207ENST00000495784 GRAMD1CQ8IYS0 662 aa19.64■□□□□ 0.73
CLCNKA-207ENST00000495784 SYAP1Q96A49 352 aaPredicted RBP19.64■□□□□ 0.73
CLCNKA-207ENST00000495784 ELOVL4Q9GZR5 314 aa19.64■□□□□ 0.73
CLCNKA-207ENST00000495784 FBRSL1Q9HCM7 1045 aaKnown RBP19.64■□□□□ 0.73
CLCNKA-207ENST00000495784 A8MXQ7 604 aa19.63■□□□□ 0.73
CLCNKA-207ENST00000495784 STAU1O95793 577 aaKnown RBP19.63■□□□□ 0.73
CLCNKA-207ENST00000495784 SLFN14P0C7P3 912 aa19.63■□□□□ 0.73
CLCNKA-207ENST00000495784 PFKLP17858 780 aa19.63■□□□□ 0.73
CLCNKA-207ENST00000495784 PTPN1P18031 435 aaKnown RBP19.63■□□□□ 0.73
CLCNKA-207ENST00000495784 HOXC13P31276 330 aa19.63■□□□□ 0.73
CLCNKA-207ENST00000495784 ATICP31939 592 aa19.63■□□□□ 0.73
CLCNKA-207ENST00000495784 PXNP49023 591 aaPredicted RBP19.63■□□□□ 0.73
CLCNKA-207ENST00000495784 USP46P62068 366 aa19.63■□□□□ 0.73
CLCNKA-207ENST00000495784 DNM1Q05193 864 aaKnown RBP19.63■□□□□ 0.73
CLCNKA-207ENST00000495784 NR1H3Q13133 447 aa19.63■□□□□ 0.73
CLCNKA-207ENST00000495784 BIRC3Q13489 604 aa19.63■□□□□ 0.73
CLCNKA-207ENST00000495784 PKP1Q13835 747 aa19.63■□□□□ 0.73
CLCNKA-207ENST00000495784 FBXO43Q4G163 708 aa19.63■□□□□ 0.73
CLCNKA-207ENST00000495784 NAIF1Q69YI7 327 aaPredicted RBP19.63■□□□□ 0.73
CLCNKA-207ENST00000495784 SPRYD3Q8NCJ5 442 aa19.63■□□□□ 0.73
CLCNKA-207ENST00000495784 ZNF516Q92618 1163 aa19.63■□□□□ 0.73
CLCNKA-207ENST00000495784 C8orf48Q96LL4 319 aa19.63■□□□□ 0.73
CLCNKA-207ENST00000495784 TTLL2Q9BWV7 592 aa19.63■□□□□ 0.73
CLCNKA-207ENST00000495784 EXOC1Q9NV70 894 aa19.63■□□□□ 0.73
CLCNKA-207ENST00000495784 SERTAD1Q9UHV2 236 aa19.63■□□□□ 0.73
CLCNKA-207ENST00000495784 NME7Q9Y5B8 376 aa19.63■□□□□ 0.73
CLCNKA-207ENST00000495784 ABL1P00519 1130 aa19.62■□□□□ 0.73
CLCNKA-207ENST00000495784 TCF3P15923 654 aa19.62■□□□□ 0.73
CLCNKA-207ENST00000495784 PPP3CCP48454 512 aa19.62■□□□□ 0.73
CLCNKA-207ENST00000495784 CASP4P49662 377 aa19.62■□□□□ 0.73
CLCNKA-207ENST00000495784 ATXN1P54253 815 aaKnown RBP19.62■□□□□ 0.73
CLCNKA-207ENST00000495784 NOP14P78316 857 aaKnown RBP19.62■□□□□ 0.73
CLCNKA-207ENST00000495784 EML3Q32P44 896 aa19.62■□□□□ 0.73
CLCNKA-207ENST00000495784 FAM160A2Q8N612 972 aaPredicted RBP19.62■□□□□ 0.73
CLCNKA-207ENST00000495784 B3GALNT2Q8NCR0 500 aa19.62■□□□□ 0.73
CLCNKA-207ENST00000495784 CD101Q93033 1021 aa19.62■□□□□ 0.73
CLCNKA-207ENST00000495784 ZNF518BQ9C0D4 1074 aa19.62■□□□□ 0.73
CLCNKA-207ENST00000495784 GZF1Q9H116 711 aaPredicted RBP19.62■□□□□ 0.73
CLCNKA-207ENST00000495784 XYLT2Q9H1B5 865 aa19.62■□□□□ 0.73
CLCNKA-207ENST00000495784 DPEP3Q9H4B8 488 aa19.62■□□□□ 0.73
CLCNKA-207ENST00000495784 SEMA4GQ9NTN9 838 aa19.62■□□□□ 0.73
CLCNKA-207ENST00000495784 RCOR1Q9UKL0 485 aa19.62■□□□□ 0.73
CLCNKA-207ENST00000495784 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.62■□□□□ 0.73
CLCNKA-207ENST00000495784 DNAH14Q0VDD8 3507 aa19.62■□□□□ 0.73
CLCNKA-207ENST00000495784 CCDC163A0A0D9SF12 145 aa19.61■□□□□ 0.73
CLCNKA-207ENST00000495784 ZNF840PA6NDX5 716 aa19.61■□□□□ 0.73
CLCNKA-207ENST00000495784 RPP40O75818 363 aaKnown RBP19.61■□□□□ 0.73
CLCNKA-207ENST00000495784 NFATC1O95644 943 aa19.61■□□□□ 0.73
CLCNKA-207ENST00000495784 AP3M2P53677 418 aa19.61■□□□□ 0.73
CLCNKA-207ENST00000495784 PSMD2Q13200 908 aa19.61■□□□□ 0.73
CLCNKA-207ENST00000495784 CSRP2Q16527 193 aa19.61■□□□□ 0.73
CLCNKA-207ENST00000495784 ZNF699Q32M78 642 aa19.61■□□□□ 0.73
CLCNKA-207ENST00000495784 TDRD10Q5VZ19 366 aaKnown RBP19.61■□□□□ 0.73
CLCNKA-207ENST00000495784 GAB3Q8WWW8 586 aa19.61■□□□□ 0.73
CLCNKA-207ENST00000495784 PAGE5Q96GU1 130 aa19.61■□□□□ 0.73
CLCNKA-207ENST00000495784 SLITRK1Q96PX8 696 aa19.61■□□□□ 0.73
CLCNKA-207ENST00000495784 RTKNQ9BST9 563 aa19.61■□□□□ 0.73
CLCNKA-207ENST00000495784 ATP8B3O60423 1300 aa19.6■□□□□ 0.73
CLCNKA-207ENST00000495784 LEFTY2O00292 366 aa19.6■□□□□ 0.73
CLCNKA-207ENST00000495784 ACTN4O43707 911 aaKnown RBP19.6■□□□□ 0.73
CLCNKA-207ENST00000495784 CCDC192P0DO97 292 aa19.6■□□□□ 0.73
CLCNKA-207ENST00000495784 IFRD2Q12894 506 aaPredicted RBP19.6■□□□□ 0.73
CLCNKA-207ENST00000495784 TAF10Q12962 218 aa19.6■□□□□ 0.73
CLCNKA-207ENST00000495784 STK4Q13043 487 aa19.6■□□□□ 0.73
CLCNKA-207ENST00000495784 NCOA4Q13772 614 aa19.6■□□□□ 0.73
CLCNKA-207ENST00000495784 ZNF667Q5HYK9 610 aa19.6■□□□□ 0.73
CLCNKA-207ENST00000495784 CAMKK1Q8N5S9 505 aa19.6■□□□□ 0.73
CLCNKA-207ENST00000495784 RPLP0P6Q8NHW5 317 aa19.6■□□□□ 0.73
CLCNKA-207ENST00000495784 B3GNT5Q9BYG0 378 aa19.6■□□□□ 0.73
CLCNKA-207ENST00000495784 LINC00597Q9H2U6 94 aa19.6■□□□□ 0.73
CLCNKA-207ENST00000495784 SMYD3Q9H7B4 428 aa19.6■□□□□ 0.73
CLCNKA-207ENST00000495784 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.59■□□□□ 0.73
CLCNKA-207ENST00000495784 CLDN5O00501 218 aa19.59■□□□□ 0.73
CLCNKA-207ENST00000495784 KLRC4O43908 158 aa19.59■□□□□ 0.73
CLCNKA-207ENST00000495784 FOXD2O60548 495 aaPredicted RBP19.59■□□□□ 0.73
CLCNKA-207ENST00000495784 CACNA2D1P54289 1103 aa19.59■□□□□ 0.73
CLCNKA-207ENST00000495784 SLC7A9P82251 487 aa19.59■□□□□ 0.73
CLCNKA-207ENST00000495784 KMT5BQ4FZB7 885 aa19.59■□□□□ 0.73
CLCNKA-207ENST00000495784 PRR23CQ6ZRP0 262 aa19.59■□□□□ 0.73
CLCNKA-207ENST00000495784 CACNA2D4Q7Z3S7 1137 aa19.59■□□□□ 0.73
CLCNKA-207ENST00000495784 KIAA0895Q8NCT3 520 aa19.59■□□□□ 0.73
CLCNKA-207ENST00000495784 CCDC26Q8TAB7 109 aa19.59■□□□□ 0.73
CLCNKA-207ENST00000495784 PLEKHO2Q8TD55 490 aa19.59■□□□□ 0.73
CLCNKA-207ENST00000495784 NETO1Q8TDF5 533 aa19.59■□□□□ 0.73
CLCNKA-207ENST00000495784 PARD3BQ8TEW8 1205 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms