RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 IFRD2Q12894 506 aaPredicted RBP20.59■□□□□ 0.89
HDAC4-212ENST00000495497 GOLGA7BQ2TAP0 167 aa20.59■□□□□ 0.89
HDAC4-212ENST00000495497 STXBP5Q5T5C0 1151 aa20.59■□□□□ 0.89
HDAC4-212ENST00000495497 DENND5BQ6ZUT9 1274 aa20.59■□□□□ 0.89
HDAC4-212ENST00000495497 GJD3Q8N144 294 aa20.59■□□□□ 0.89
HDAC4-212ENST00000495497 RNF214Q8ND24 703 aa20.59■□□□□ 0.89
HDAC4-212ENST00000495497 ACSF2Q96CM8 615 aaPredicted RBP20.59■□□□□ 0.89
HDAC4-212ENST00000495497 FAM81BQ96LP2 452 aa20.59■□□□□ 0.89
HDAC4-212ENST00000495497 PCMTD1Q96MG8 357 aaPredicted RBP20.59■□□□□ 0.89
HDAC4-212ENST00000495497 GANQ9H2C0 597 aa20.59■□□□□ 0.89
HDAC4-212ENST00000495497 ATXN3LQ9H3M9 355 aa20.59■□□□□ 0.89
HDAC4-212ENST00000495497 RTN4Q9NQC3 1192 aaKnown RBP20.59■□□□□ 0.89
HDAC4-212ENST00000495497 FAM207AQ9NSI2 230 aaPredicted RBP20.59■□□□□ 0.89
HDAC4-212ENST00000495497 CDH7Q9ULB5 785 aa20.59■□□□□ 0.89
HDAC4-212ENST00000495497 CNTN6Q9UQ52 1028 aa20.59■□□□□ 0.89
HDAC4-212ENST00000495497 DENND4AQ7Z401 1863 aa20.58■□□□□ 0.89
HDAC4-212ENST00000495497 FOXN3O00409 490 aaPredicted RBP20.58■□□□□ 0.89
HDAC4-212ENST00000495497 EPHB6O15197 1021 aa20.58■□□□□ 0.89
HDAC4-212ENST00000495497 SERPINC1P01008 464 aa20.58■□□□□ 0.89
HDAC4-212ENST00000495497 UCHL3P15374 230 aa20.58■□□□□ 0.89
HDAC4-212ENST00000495497 ZNF445P59923 1031 aa20.58■□□□□ 0.89
HDAC4-212ENST00000495497 RAPGEF1Q13905 1077 aa20.58■□□□□ 0.89
HDAC4-212ENST00000495497 TMEM150AQ86TG1 271 aa20.58■□□□□ 0.89
HDAC4-212ENST00000495497 TTC30AQ86WT1 665 aa20.58■□□□□ 0.89
HDAC4-212ENST00000495497 NPAS3Q8IXF0 933 aa20.58■□□□□ 0.89
HDAC4-212ENST00000495497 LEMD2Q8NC56 503 aa20.58■□□□□ 0.89
HDAC4-212ENST00000495497 SHC3Q92529 594 aa20.58■□□□□ 0.89
HDAC4-212ENST00000495497 ZSWIM3Q96MP5 696 aa20.58■□□□□ 0.89
HDAC4-212ENST00000495497 NAA15Q9BXJ9 866 aaKnown RBP20.58■□□□□ 0.89
HDAC4-212ENST00000495497 DUSP16Q9BY84 665 aa20.58■□□□□ 0.89
HDAC4-212ENST00000495497 GPR88Q9GZN0 384 aa20.58■□□□□ 0.89
HDAC4-212ENST00000495497 CSNK1G1Q9HCP0 422 aa20.58■□□□□ 0.89
HDAC4-212ENST00000495497 PLCB1Q9NQ66 1216 aa20.58■□□□□ 0.89
HDAC4-212ENST00000495497 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.58■□□□□ 0.892e-7■■■■■ 29.7
HDAC4-212ENST00000495497 LIMD1Q9UGP4 676 aa20.58■□□□□ 0.89
HDAC4-212ENST00000495497 TSPAN16Q9UKR8 245 aa20.58■□□□□ 0.89
HDAC4-212ENST00000495497 PTPRDP23468 1912 aa20.57■□□□□ 0.88
HDAC4-212ENST00000495497 O00370 1275 aa20.57■□□□□ 0.88
HDAC4-212ENST00000495497 TNFRSF10BO14763 440 aa20.57■□□□□ 0.88
HDAC4-212ENST00000495497 F11P03951 625 aa20.57■□□□□ 0.88
HDAC4-212ENST00000495497 LAMP2P13473 410 aa20.57■□□□□ 0.88
HDAC4-212ENST00000495497 FANCCQ00597 558 aa20.57■□□□□ 0.88
HDAC4-212ENST00000495497 DRAP1Q14919 205 aaPredicted RBP20.57■□□□□ 0.88
HDAC4-212ENST00000495497 GPRIN1Q7Z2K8 1008 aa20.57■□□□□ 0.88
HDAC4-212ENST00000495497 SCAMP5Q8TAC9 235 aa20.57■□□□□ 0.88
HDAC4-212ENST00000495497 UBA3Q8TBC4 463 aa20.57■□□□□ 0.88
HDAC4-212ENST00000495497 ERGIC2Q96RQ1 377 aa20.57■□□□□ 0.88
HDAC4-212ENST00000495497 COL25A1Q9BXS0 654 aaPredicted RBP20.57■□□□□ 0.88
HDAC4-212ENST00000495497 A0A0C4DFX4 3053 aa20.56■□□□□ 0.88
HDAC4-212ENST00000495497 A0A1B0GTH6 734 aa20.56■□□□□ 0.88
HDAC4-212ENST00000495497 HHLA1C9JL84 531 aa20.56■□□□□ 0.88
HDAC4-212ENST00000495497 CYP26A1O43174 497 aa20.56■□□□□ 0.88
HDAC4-212ENST00000495497 TADA3O75528 432 aa20.56■□□□□ 0.88
HDAC4-212ENST00000495497 NPR3P17342 541 aa20.56■□□□□ 0.88
HDAC4-212ENST00000495497 SLC5A3P53794 718 aa20.56■□□□□ 0.88
HDAC4-212ENST00000495497 POLR2FP61218 127 aaKnown RBP20.56■□□□□ 0.88
HDAC4-212ENST00000495497 FILIP1LQ4L180 1135 aa20.56■□□□□ 0.88
HDAC4-212ENST00000495497 GPIHBP1Q8IV16 184 aa20.56■□□□□ 0.88
HDAC4-212ENST00000495497 ZDHHC14Q8IZN3 488 aa20.56■□□□□ 0.88
HDAC4-212ENST00000495497 NUP93Q8N1F7 819 aa20.56■□□□□ 0.88
HDAC4-212ENST00000495497 PLCD3Q8N3E9 789 aa20.56■□□□□ 0.88
HDAC4-212ENST00000495497 ANKRD52Q8NB46 1076 aa20.56■□□□□ 0.88
HDAC4-212ENST00000495497 RSAD2Q8WXG1 361 aa20.56■□□□□ 0.88
HDAC4-212ENST00000495497 TRMT2BQ96GJ1 504 aaKnown RBP20.56■□□□□ 0.88
HDAC4-212ENST00000495497 MYRFLQ96LU7 910 aa20.56■□□□□ 0.88
HDAC4-212ENST00000495497 NLRC4Q9NPP4 1024 aa20.56■□□□□ 0.88
HDAC4-212ENST00000495497 EPS15L1Q9UBC2 864 aa20.56■□□□□ 0.88
HDAC4-212ENST00000495497 KIAA1257Q9ULG3 409 aa20.56■□□□□ 0.88
HDAC4-212ENST00000495497 TULP2O00295 520 aa20.55■□□□□ 0.88
HDAC4-212ENST00000495497 MICAL2O94851 1124 aa20.55■□□□□ 0.88
HDAC4-212ENST00000495497 FGF19O95750 216 aa20.55■□□□□ 0.88
HDAC4-212ENST00000495497 ASGR2P07307 311 aa20.55■□□□□ 0.88
HDAC4-212ENST00000495497 CDC25CP30307 473 aa20.55■□□□□ 0.88
HDAC4-212ENST00000495497 PDE4CQ08493 712 aa20.55■□□□□ 0.88
HDAC4-212ENST00000495497 RNF135Q8IUD6 432 aa20.55■□□□□ 0.88
HDAC4-212ENST00000495497 NEK11Q8NG66 645 aa20.55■□□□□ 0.88
HDAC4-212ENST00000495497 CEP295NLQ96MC4 621 aa20.55■□□□□ 0.88
HDAC4-212ENST00000495497 TTLL2Q9BWV7 592 aa20.55■□□□□ 0.88
HDAC4-212ENST00000495497 SLITRK6Q9H5Y7 841 aa20.55■□□□□ 0.88
HDAC4-212ENST00000495497 HESX1Q9UBX0 185 aa20.55■□□□□ 0.88
HDAC4-212ENST00000495497 CFHP08603 1231 aa20.54■□□□□ 0.88
HDAC4-212ENST00000495497 GNA15P30679 374 aa20.54■□□□□ 0.88
HDAC4-212ENST00000495497 CLCN1P35523 988 aa20.54■□□□□ 0.88
HDAC4-212ENST00000495497 TAF10Q12962 218 aa20.54■□□□□ 0.88
HDAC4-212ENST00000495497 NR1I3Q14994 352 aa20.54■□□□□ 0.88
HDAC4-212ENST00000495497 CNGA2Q16280 664 aa20.54■□□□□ 0.88
HDAC4-212ENST00000495497 GPR158Q5T848 1215 aa20.54■□□□□ 0.88
HDAC4-212ENST00000495497 PARM1Q6UWI2 310 aa20.54■□□□□ 0.88
HDAC4-212ENST00000495497 LCLAT1Q6UWP7 414 aa20.54■□□□□ 0.88
HDAC4-212ENST00000495497 GCNAQ96QF7 691 aa20.54■□□□□ 0.88
HDAC4-212ENST00000495497 STK33Q9BYT3 514 aa20.54■□□□□ 0.88
HDAC4-212ENST00000495497 UXTQ9UBK9 157 aaPredicted RBP20.54■□□□□ 0.88
HDAC4-212ENST00000495497 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.54■□□□□ 0.88
HDAC4-212ENST00000495497 M0QYV0 167 aa20.53■□□□□ 0.88
HDAC4-212ENST00000495497 THAP12O43422 761 aa20.53■□□□□ 0.88
HDAC4-212ENST00000495497 RTN3O95197 1032 aaPredicted RBP20.53■□□□□ 0.88
HDAC4-212ENST00000495497 YWHAQP27348 245 aa20.53■□□□□ 0.88
HDAC4-212ENST00000495497 BCAT1P54687 386 aa20.53■□□□□ 0.88
HDAC4-212ENST00000495497 ARHGAP15Q53QZ3 475 aa20.53■□□□□ 0.88
HDAC4-212ENST00000495497 FAM78AQ5JUQ0 283 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms