RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 GRIK3Q13003 919 aa10.8□□□□□ -0.68
HDAC3-214ENST00000495485 DENND1BQ6P3S1 775 aa10.8□□□□□ -0.68
HDAC3-214ENST00000495485 DSTYKQ6XUX3 929 aa10.8□□□□□ -0.68
HDAC3-214ENST00000495485 ADGRF2Q8IZF7 708 aa10.8□□□□□ -0.68
HDAC3-214ENST00000495485 NIPA2Q8N8Q9 360 aa10.8□□□□□ -0.68
HDAC3-214ENST00000495485 GRK7Q8WTQ7 553 aa10.8□□□□□ -0.68
HDAC3-214ENST00000495485 CD101Q93033 1021 aa10.8□□□□□ -0.68
HDAC3-214ENST00000495485 PKNOX2Q96KN3 472 aa10.8□□□□□ -0.68
HDAC3-214ENST00000495485 KRT12Q99456 494 aa10.8□□□□□ -0.68
HDAC3-214ENST00000495485 TMEM175Q9BSA9 504 aa10.8□□□□□ -0.68
HDAC3-214ENST00000495485 C11orf84Q9BUA3 381 aaPredicted RBP10.8□□□□□ -0.68
HDAC3-214ENST00000495485 ST7Q9NRC1 585 aa10.8□□□□□ -0.68
HDAC3-214ENST00000495485 TSPAN16Q9UKR8 245 aa10.8□□□□□ -0.68
HDAC3-214ENST00000495485 PCDHB12Q9Y5F1 795 aa10.8□□□□□ -0.68
HDAC3-214ENST00000495485 PRRC2BQ5JSZ5 2229 aaKnown RBP10.8□□□□□ -0.68
HDAC3-214ENST00000495485 SCN1AP35498 2009 aa10.79□□□□□ -0.68
HDAC3-214ENST00000495485 LINC01553A4QN01 128 aa10.79□□□□□ -0.68
HDAC3-214ENST00000495485 ARL5CA6NH57 179 aa10.79□□□□□ -0.68
HDAC3-214ENST00000495485 TBKBP1A7MCY6 615 aa10.79□□□□□ -0.68
HDAC3-214ENST00000495485 NDC80O14777 642 aa10.79□□□□□ -0.68
HDAC3-214ENST00000495485 SART1O43290 800 aaKnown RBP10.79□□□□□ -0.68
HDAC3-214ENST00000495485 HEXIM1O94992 359 aaKnown RBP10.79□□□□□ -0.68
HDAC3-214ENST00000495485 CA3P07451 260 aa10.79□□□□□ -0.68
HDAC3-214ENST00000495485 ODC1P11926 461 aa10.79□□□□□ -0.68
HDAC3-214ENST00000495485 PCSK1P29120 753 aa10.79□□□□□ -0.68
HDAC3-214ENST00000495485 SCNN1AP37088 669 aa10.79□□□□□ -0.68
HDAC3-214ENST00000495485 PDCLQ13371 301 aa10.79□□□□□ -0.68
HDAC3-214ENST00000495485 CUL1Q13616 776 aa10.79□□□□□ -0.68
HDAC3-214ENST00000495485 SMC1AQ14683 1233 aaKnown RBP10.79□□□□□ -0.68
HDAC3-214ENST00000495485 SOWAHAQ2M3V2 549 aa10.79□□□□□ -0.68
HDAC3-214ENST00000495485 GOLGA7BQ2TAP0 167 aa10.79□□□□□ -0.68
HDAC3-214ENST00000495485 NOMO2Q5JPE7 1267 aa10.79□□□□□ -0.68
HDAC3-214ENST00000495485 EMBQ6PCB8 327 aa10.79□□□□□ -0.68
HDAC3-214ENST00000495485 CCNI2Q6ZMN8 369 aaPredicted RBP10.79□□□□□ -0.68
HDAC3-214ENST00000495485 POLNQ7Z5Q5 900 aa10.79□□□□□ -0.68
HDAC3-214ENST00000495485 ACOT1Q86TX2 421 aa10.79□□□□□ -0.68
HDAC3-214ENST00000495485 KLHL7Q8IXQ5 586 aa10.79□□□□□ -0.68
HDAC3-214ENST00000495485 KATNAL2Q8IYT4 538 aa10.79□□□□□ -0.68
HDAC3-214ENST00000495485 WDTC1Q8N5D0 677 aa10.79□□□□□ -0.68
HDAC3-214ENST00000495485 ANKRD52Q8NB46 1076 aa10.79□□□□□ -0.68
HDAC3-214ENST00000495485 EXD1Q8NHP7 514 aa10.79□□□□□ -0.68
HDAC3-214ENST00000495485 MCRS1Q96EZ8 462 aa10.79□□□□□ -0.68
HDAC3-214ENST00000495485 HSFY1Q96LI6 401 aa10.79□□□□□ -0.68
HDAC3-214ENST00000495485 CASD1Q96PB1 797 aa10.79□□□□□ -0.68
HDAC3-214ENST00000495485 MCEEQ96PE7 176 aa10.79□□□□□ -0.68
HDAC3-214ENST00000495485 FAM193BQ96PV7 902 aaPredicted RBP10.79□□□□□ -0.68
HDAC3-214ENST00000495485 FAM129AQ9BZQ8 928 aa10.79□□□□□ -0.68
HDAC3-214ENST00000495485 LMAN2LQ9H0V9 348 aa10.79□□□□□ -0.68
HDAC3-214ENST00000495485 RNF39Q9H2S5 420 aa10.79□□□□□ -0.68
HDAC3-214ENST00000495485 ZNF576Q9H609 170 aa10.79□□□□□ -0.68
HDAC3-214ENST00000495485 FAM114A2Q9NRY5 505 aa10.79□□□□□ -0.68
HDAC3-214ENST00000495485 LZTS1Q9Y250 596 aa10.79□□□□□ -0.68
HDAC3-214ENST00000495485 KIAA1671Q9BY89 1806 aa10.79□□□□□ -0.68
HDAC3-214ENST00000495485 GOLGA8SH3BPF8 625 aa10.78□□□□□ -0.68
HDAC3-214ENST00000495485 PTGESO14684 152 aa10.78□□□□□ -0.68
HDAC3-214ENST00000495485 FSCN2O14926 492 aa10.78□□□□□ -0.68
HDAC3-214ENST00000495485 PHF2O75151 1096 aa10.78□□□□□ -0.68
HDAC3-214ENST00000495485 ERBB2P04626 1255 aa10.78□□□□□ -0.68
HDAC3-214ENST00000495485 CFHP08603 1231 aa10.78□□□□□ -0.68
HDAC3-214ENST00000495485 POU3F3P20264 500 aaPredicted RBP10.78□□□□□ -0.68
HDAC3-214ENST00000495485 PSMA2P25787 234 aa10.78□□□□□ -0.68
HDAC3-214ENST00000495485 SSTR3P32745 418 aaPredicted RBP10.78□□□□□ -0.68
HDAC3-214ENST00000495485 RDXP35241 583 aaKnown RBP10.78□□□□□ -0.68
HDAC3-214ENST00000495485 BMPR1AP36894 532 aa10.78□□□□□ -0.68
HDAC3-214ENST00000495485 MLH1P40692 756 aa10.78□□□□□ -0.68
HDAC3-214ENST00000495485 FNTAP49354 379 aa10.78□□□□□ -0.68
HDAC3-214ENST00000495485 ALDH7A1P49419 539 aaKnown RBP10.78□□□□□ -0.68
HDAC3-214ENST00000495485 VSNL1P62760 191 aa10.78□□□□□ -0.68
HDAC3-214ENST00000495485 RNASELQ05823 741 aaKnown RBP10.78□□□□□ -0.68
HDAC3-214ENST00000495485 NNTQ13423 1086 aa10.78□□□□□ -0.68
HDAC3-214ENST00000495485 TUSC3Q13454 348 aa10.78□□□□□ -0.68
HDAC3-214ENST00000495485 MAPRE1Q15691 268 aaKnown RBP10.78□□□□□ -0.68
HDAC3-214ENST00000495485 PTPROQ16827 1216 aa10.78□□□□□ -0.68
HDAC3-214ENST00000495485 PTPN20Q4JDL3 420 aa10.78□□□□□ -0.68
HDAC3-214ENST00000495485 CLLU1OSQ5K130 101 aa10.78□□□□□ -0.68
HDAC3-214ENST00000495485 PPP1R26Q5T8A7 1209 aaPredicted RBP10.78□□□□□ -0.68
HDAC3-214ENST00000495485 OR6B2Q6IFH4 312 aa10.78□□□□□ -0.68
HDAC3-214ENST00000495485 PDE12Q6L8Q7 609 aaKnown RBP10.78□□□□□ -0.68
HDAC3-214ENST00000495485 AGMOQ6ZNB7 445 aa10.78□□□□□ -0.68
HDAC3-214ENST00000495485 SYDE1Q6ZW31 735 aaPredicted RBP10.78□□□□□ -0.68
HDAC3-214ENST00000495485 LIMS2Q7Z4I7 341 aa10.78□□□□□ -0.68
HDAC3-214ENST00000495485 XYLT1Q86Y38 959 aa10.78□□□□□ -0.68
HDAC3-214ENST00000495485 SLC13A5Q86YT5 568 aaPredicted RBP10.78□□□□□ -0.68
HDAC3-214ENST00000495485 CCDC50Q8IVM0 306 aa10.78□□□□□ -0.68
HDAC3-214ENST00000495485 THEM5Q8N1Q8 247 aa10.78□□□□□ -0.68
HDAC3-214ENST00000495485 GOLGA6L1Q8N7Z2 621 aa10.78□□□□□ -0.68
HDAC3-214ENST00000495485 RNF169Q8NCN4 708 aa10.78□□□□□ -0.68
HDAC3-214ENST00000495485 MAGOHBQ96A72 148 aaKnown RBP10.78□□□□□ -0.68
HDAC3-214ENST00000495485 BTBD6Q96KE9 485 aa10.78□□□□□ -0.68
HDAC3-214ENST00000495485 SENP8Q96LD8 212 aa10.78□□□□□ -0.68
HDAC3-214ENST00000495485 TWNKQ96RR1 684 aa10.78□□□□□ -0.68
HDAC3-214ENST00000495485 PNKPQ96T60 521 aa10.78□□□□□ -0.68
HDAC3-214ENST00000495485 GAD1Q99259 594 aa10.78□□□□□ -0.68
HDAC3-214ENST00000495485 MRPL45Q9BRJ2 306 aaKnown RBP10.78□□□□□ -0.68
HDAC3-214ENST00000495485 AP1M1Q9BXS5 423 aa10.78□□□□□ -0.68
HDAC3-214ENST00000495485 OGFRQ9NZT2 677 aa10.78□□□□□ -0.68
HDAC3-214ENST00000495485 USTQ9Y2C2 406 aa10.78□□□□□ -0.68
HDAC3-214ENST00000495485 TCRBV5S1A1TA0A578 114 aa10.77□□□□□ -0.69
HDAC3-214ENST00000495485 GRXCR1A8MXD5 290 aa10.77□□□□□ -0.69
HDAC3-214ENST00000495485 TRAPPC3O43617 180 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms