RNA–Protein interactions for RNA: ENST00000495471.1

CCNL1-225, Transcript of cyclin L1, human

TSL 2

Gene CCNL1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-225	ENST00000495471	NRIP3	Q9NQ35	241 aa		4.87	□□□□□ -1.63
CCNL1-225	ENST00000495471		A0A1W2PPL8	197 aa		4.86	□□□□□ -1.63
CCNL1-225	ENST00000495471	TMEM233	B4DJY2	109 aa		4.86	□□□□□ -1.63
CCNL1-225	ENST00000495471	BTN3A1	O00481	513 aa		4.86	□□□□□ -1.63
CCNL1-225	ENST00000495471	TUBB4A	P04350	444 aa		4.86	□□□□□ -1.63
CCNL1-225	ENST00000495471	XRCC6	P12956	609 aa	Known RBP eCLIP	4.86	□□□□□ -1.63
CCNL1-225	ENST00000495471	SFPQ	P23246	707 aa	Known RBP eCLIP	4.86	□□□□□ -1.63
CCNL1-225	ENST00000495471	AGFG1	P52594	562 aa	Known RBP	4.86	□□□□□ -1.63
CCNL1-225	ENST00000495471	MGAT5B	Q3V5L5	792 aa		4.86	□□□□□ -1.63
CCNL1-225	ENST00000495471	PLA1A	Q53H76	456 aa		4.86	□□□□□ -1.63
CCNL1-225	ENST00000495471	CATSPERG	Q6ZRH7	1159 aa		4.86	□□□□□ -1.63
CCNL1-225	ENST00000495471	ABHD11	Q8NFV4	315 aa		4.86	□□□□□ -1.63
CCNL1-225	ENST00000495471	OR6B3	Q8NGW1	331 aa		4.86	□□□□□ -1.63
CCNL1-225	ENST00000495471	BPIFB1	Q8TDL5	484 aa		4.86	□□□□□ -1.63
CCNL1-225	ENST00000495471	TMEM171	Q8WVE6	324 aa		4.86	□□□□□ -1.63
CCNL1-225	ENST00000495471	RAPGEF4	Q8WZA2	1011 aa		4.86	□□□□□ -1.63
CCNL1-225	ENST00000495471	RPL36AL	Q969Q0	106 aa	Known RBP	4.86	□□□□□ -1.63
CCNL1-225	ENST00000495471	RITA1	Q96K30	269 aa		4.86	□□□□□ -1.63
CCNL1-225	ENST00000495471	ASB2	Q96Q27	587 aa		4.86	□□□□□ -1.63
CCNL1-225	ENST00000495471	MS4A7	Q9GZW8	240 aa	Predicted RBP	4.86	□□□□□ -1.63
CCNL1-225	ENST00000495471	SMURF2	Q9HAU4	748 aa		4.86	□□□□□ -1.63
CCNL1-225	ENST00000495471	ATP6V0A4	Q9HBG4	840 aa		4.86	□□□□□ -1.63
CCNL1-225	ENST00000495471	ZIM2	Q9NZV7	527 aa		4.86	□□□□□ -1.63
CCNL1-225	ENST00000495471	CACNA1I	Q9P0X4	2223 aa		4.85	□□□□□ -1.63
CCNL1-225	ENST00000495471		H7C1Q1	480 aa		4.85	□□□□□ -1.63
CCNL1-225	ENST00000495471	EXOC3	O60645	756 aa		4.85	□□□□□ -1.63
CCNL1-225	ENST00000495471	FPR3	P25089	353 aa		4.85	□□□□□ -1.63
CCNL1-225	ENST00000495471	PRKAG1	P54619	331 aa		4.85	□□□□□ -1.63
CCNL1-225	ENST00000495471	E2F1	Q01094	437 aa		4.85	□□□□□ -1.63
CCNL1-225	ENST00000495471	SLC13A2	Q13183	592 aa		4.85	□□□□□ -1.63
CCNL1-225	ENST00000495471	GTF2H3	Q13889	308 aa		4.85	□□□□□ -1.63
CCNL1-225	ENST00000495471	ANO6	Q4KMQ2	910 aa		4.85	□□□□□ -1.63
CCNL1-225	ENST00000495471	L1TD1	Q5T7N2	865 aa	Known RBP	4.85	□□□□□ -1.63
CCNL1-225	ENST00000495471	SLC9A4	Q6AI14	798 aa		4.85	□□□□□ -1.63
CCNL1-225	ENST00000495471	SLC2A7	Q6PXP3	512 aa		4.85	□□□□□ -1.63
CCNL1-225	ENST00000495471	OVCH2	Q7RTZ1	564 aa		4.85	□□□□□ -1.63
CCNL1-225	ENST00000495471	CAND1	Q86VP6	1230 aa	Known RBP	4.85	□□□□□ -1.63
CCNL1-225	ENST00000495471	IZUMO1	Q8IYV9	350 aa		4.85	□□□□□ -1.63
CCNL1-225	ENST00000495471	MPP5	Q8N3R9	675 aa		4.85	□□□□□ -1.63
CCNL1-225	ENST00000495471		Q8N9P0	234 aa	Predicted RBP	4.85	□□□□□ -1.63
CCNL1-225	ENST00000495471	C8orf58	Q8NAV2	365 aa		4.85	□□□□□ -1.63
CCNL1-225	ENST00000495471	MAML1	Q92585	1016 aa		4.85	□□□□□ -1.63
CCNL1-225	ENST00000495471	DAZAP1	Q96EP5	407 aa	Known RBP	4.85	□□□□□ -1.63
CCNL1-225	ENST00000495471	C5orf34	Q96MH7	638 aa		4.85	□□□□□ -1.63
CCNL1-225	ENST00000495471	CAMKK2	Q96RR4	588 aa		4.85	□□□□□ -1.63
CCNL1-225	ENST00000495471	B3GNT5	Q9BYG0	378 aa		4.85	□□□□□ -1.63
CCNL1-225	ENST00000495471	BHMT2	Q9H2M3	363 aa		4.85	□□□□□ -1.63
CCNL1-225	ENST00000495471	PDGFC	Q9NRA1	345 aa		4.85	□□□□□ -1.63
CCNL1-225	ENST00000495471	TRMT13	Q9NUP7	481 aa	Known RBP	4.85	□□□□□ -1.63
CCNL1-225	ENST00000495471	TBC1D30	Q9Y2I9	924 aa		4.85	□□□□□ -1.63
CCNL1-225	ENST00000495471	SMIM35	A0A1B0GVV1	85 aa		4.84	□□□□□ -1.63
CCNL1-225	ENST00000495471	AP4M1	O00189	453 aa		4.84	□□□□□ -1.63
CCNL1-225	ENST00000495471	PHGDH	O43175	533 aa	Known RBP	4.84	□□□□□ -1.63
CCNL1-225	ENST00000495471	RFPL1	O75677	317 aa		4.84	□□□□□ -1.63
CCNL1-225	ENST00000495471	TUSC2	O75896	110 aa		4.84	□□□□□ -1.63
CCNL1-225	ENST00000495471	DLD	P09622	509 aa	Known RBP	4.84	□□□□□ -1.63
CCNL1-225	ENST00000495471	EN2	P19622	333 aa	Predicted RBP	4.84	□□□□□ -1.63
CCNL1-225	ENST00000495471	EPHB1	P54762	984 aa		4.84	□□□□□ -1.63
CCNL1-225	ENST00000495471	PTCHD3	Q3KNS1	767 aa		4.84	□□□□□ -1.63
CCNL1-225	ENST00000495471	TBC1D25	Q3MII6	688 aa		4.84	□□□□□ -1.63
CCNL1-225	ENST00000495471	RNASE12	Q5GAN4	147 aa	Known RBP	4.84	□□□□□ -1.63
CCNL1-225	ENST00000495471	SWSAP1	Q6NVH7	229 aa		4.84	□□□□□ -1.63
CCNL1-225	ENST00000495471	NPNT	Q6UXI9	565 aa		4.84	□□□□□ -1.63
CCNL1-225	ENST00000495471	ANKRD13A	Q8IZ07	590 aa		4.84	□□□□□ -1.63
CCNL1-225	ENST00000495471	TERB1	Q8NA31	727 aa		4.84	□□□□□ -1.63
CCNL1-225	ENST00000495471	IL31RA	Q8NI17	732 aa		4.84	□□□□□ -1.63
CCNL1-225	ENST00000495471	PPP2R3C	Q969Q6	453 aa		4.84	□□□□□ -1.63
CCNL1-225	ENST00000495471	SNX18	Q96RF0	628 aa		4.84	□□□□□ -1.63
CCNL1-225	ENST00000495471	PRR25	Q96S07	402 aa		4.84	□□□□□ -1.63
CCNL1-225	ENST00000495471	DPCD	Q9BVM2	203 aa	Predicted RBP	4.84	□□□□□ -1.63
CCNL1-225	ENST00000495471	CIPC	Q9C0C6	399 aa		4.84	□□□□□ -1.63
CCNL1-225	ENST00000495471	GBA2	Q9HCG7	927 aa	Predicted RBP	4.84	□□□□□ -1.63
CCNL1-225	ENST00000495471	FER1L4	A9Z1Z3	1794 aa		4.83	□□□□□ -1.64
CCNL1-225	ENST00000495471	TBC1D4	O60343	1298 aa		4.83	□□□□□ -1.64
CCNL1-225	ENST00000495471	PRKCB	P05771	671 aa		4.83	□□□□□ -1.64
CCNL1-225	ENST00000495471	ARHGAP25	P42331	645 aa		4.83	□□□□□ -1.64
CCNL1-225	ENST00000495471	RENBP	P51606	427 aa		4.83	□□□□□ -1.64
CCNL1-225	ENST00000495471	RAB32	Q13637	225 aa		4.83	□□□□□ -1.64
CCNL1-225	ENST00000495471	DCAF12L1	Q5VU92	463 aa		4.83	□□□□□ -1.64
CCNL1-225	ENST00000495471	MTHFD1L	Q6UB35	978 aa		4.83	□□□□□ -1.64
CCNL1-225	ENST00000495471	RAVER1	Q8IY67	606 aa	Known RBP	4.83	□□□□□ -1.64
CCNL1-225	ENST00000495471	GALNT16	Q8N428	558 aa		4.83	□□□□□ -1.64
CCNL1-225	ENST00000495471	ZNF366	Q8N895	744 aa		4.83	□□□□□ -1.64
CCNL1-225	ENST00000495471	RUNDC1	Q96C34	613 aa		4.83	□□□□□ -1.64
CCNL1-225	ENST00000495471	ZNF48	Q96MX3	618 aa	Predicted RBP	4.83	□□□□□ -1.64
CCNL1-225	ENST00000495471	C17orf80	Q9BSJ5	609 aa		4.83	□□□□□ -1.64
CCNL1-225	ENST00000495471	THRAP3	Q9Y2W1	955 aa	Known RBP	4.83	□□□□□ -1.64
CCNL1-225	ENST00000495471	USP19	O94966	1318 aa		4.82	□□□□□ -1.64
CCNL1-225	ENST00000495471	KCNU1	A8MYU2	1149 aa		4.82	□□□□□ -1.64
CCNL1-225	ENST00000495471	POC1B-GALNT4	F8VUJ3	575 aa		4.82	□□□□□ -1.64
CCNL1-225	ENST00000495471	TBX3	O15119	743 aa		4.82	□□□□□ -1.64
CCNL1-225	ENST00000495471	CTNND1	O60716	968 aa	Known RBP	4.82	□□□□□ -1.64
CCNL1-225	ENST00000495471	MOSPD3	O75425	235 aa		4.82	□□□□□ -1.64
CCNL1-225	ENST00000495471	TOP3B	O95985	862 aa	Known RBP	4.82	□□□□□ -1.64
CCNL1-225	ENST00000495471	SLC7A1	P30825	629 aa		4.82	□□□□□ -1.64
CCNL1-225	ENST00000495471	ALDH5A1	P51649	535 aa	Predicted RBP	4.82	□□□□□ -1.64
CCNL1-225	ENST00000495471	PSG6	Q00889	435 aa		4.82	□□□□□ -1.64
CCNL1-225	ENST00000495471	MLC1	Q15049	377 aa		4.82	□□□□□ -1.64
CCNL1-225	ENST00000495471	CERCAM	Q5T4B2	595 aa		4.82	□□□□□ -1.64
CCNL1-225	ENST00000495471	ZDHHC24	Q6UX98	284 aa		4.82	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms