RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 OR10T2Q8NGX3 314 aa9.67□□□□□ -0.86
GARNL3-219ENST00000495172 BSNDQ8WZ55 320 aa9.67□□□□□ -0.86
GARNL3-219ENST00000495172 SNX19Q92543 992 aa9.67□□□□□ -0.86
GARNL3-219ENST00000495172 DYDC2Q96IM9 177 aa9.67□□□□□ -0.86
GARNL3-219ENST00000495172 PNKPQ96T60 521 aa9.67□□□□□ -0.86
GARNL3-219ENST00000495172 LXNQ9BS40 222 aa9.67□□□□□ -0.86
GARNL3-219ENST00000495172 KIF9Q9HAQ2 790 aa9.67□□□□□ -0.86
GARNL3-219ENST00000495172 POLD4Q9HCU8 107 aa9.67□□□□□ -0.86
GARNL3-219ENST00000495172 ARHGEF4Q9NR80 690 aa9.67□□□□□ -0.86
GARNL3-219ENST00000495172 MAFFQ9ULX9 164 aa9.67□□□□□ -0.86
GARNL3-219ENST00000495172 PLAAQ9Y263 795 aa9.67□□□□□ -0.86
GARNL3-219ENST00000495172 C2orf78A6NCI8 922 aa9.66□□□□□ -0.86
GARNL3-219ENST00000495172 N4BP3O15049 544 aa9.66□□□□□ -0.86
GARNL3-219ENST00000495172 LDOC1O95751 146 aaPredicted RBP9.66□□□□□ -0.86
GARNL3-219ENST00000495172 APODP05090 189 aa9.66□□□□□ -0.86
GARNL3-219ENST00000495172 CKMP06732 381 aa9.66□□□□□ -0.86
GARNL3-219ENST00000495172 MARCKSP29966 332 aaPredicted RBP9.66□□□□□ -0.86
GARNL3-219ENST00000495172 GUCY2FP51841 1108 aa9.66□□□□□ -0.86
GARNL3-219ENST00000495172 GABREP78334 506 aa9.66□□□□□ -0.86
GARNL3-219ENST00000495172 FAM160A1Q05DH4 1040 aa9.66□□□□□ -0.86
GARNL3-219ENST00000495172 NR1H3Q13133 447 aa9.66□□□□□ -0.86
GARNL3-219ENST00000495172 PRPF4BQ13523 1007 aaKnown RBP9.66□□□□□ -0.86
GARNL3-219ENST00000495172 INF2Q27J81 1249 aa9.66□□□□□ -0.86
GARNL3-219ENST00000495172 ZSCAN23Q3MJ62 389 aa9.66□□□□□ -0.86
GARNL3-219ENST00000495172 SLC39A12Q504Y0 691 aa9.66□□□□□ -0.86
GARNL3-219ENST00000495172 IL27RAQ6UWB1 636 aa9.66□□□□□ -0.86
GARNL3-219ENST00000495172 FILIP1Q7Z7B0 1213 aa9.66□□□□□ -0.86
GARNL3-219ENST00000495172 PHTF2Q8N3S3 785 aa9.66□□□□□ -0.86
GARNL3-219ENST00000495172 EID2Q8N6I1 236 aa9.66□□□□□ -0.86
GARNL3-219ENST00000495172 APPL2Q8NEU8 664 aa9.66□□□□□ -0.86
GARNL3-219ENST00000495172 CCDC26Q8TAB7 109 aa9.66□□□□□ -0.86
GARNL3-219ENST00000495172 ETNPPLQ8TBG4 499 aa9.66□□□□□ -0.86
GARNL3-219ENST00000495172 IPO4Q8TEX9 1081 aaKnown RBP9.66□□□□□ -0.86
GARNL3-219ENST00000495172 FOXJ1Q92949 421 aa9.66□□□□□ -0.86
GARNL3-219ENST00000495172 MRGPRX1Q96LB2 322 aa9.66□□□□□ -0.86
GARNL3-219ENST00000495172 KIFC3Q9BVG8 833 aa9.66□□□□□ -0.86
GARNL3-219ENST00000495172 VAV3Q9UKW4 847 aa9.66□□□□□ -0.86
GARNL3-219ENST00000495172 CLCA2Q9UQC9 943 aa9.66□□□□□ -0.86
GARNL3-219ENST00000495172 ANKRD6Q9Y2G4 727 aa9.66□□□□□ -0.86
GARNL3-219ENST00000495172 ARID1BQ8NFD5 2236 aaPredicted RBP9.66□□□□□ -0.86
GARNL3-219ENST00000495172 WASH3PC4AMC7 463 aa9.65□□□□□ -0.86
GARNL3-219ENST00000495172 PPEF2O14830 753 aa9.65□□□□□ -0.86
GARNL3-219ENST00000495172 SLC37A4O43826 429 aa9.65□□□□□ -0.86
GARNL3-219ENST00000495172 TRAK2O60296 914 aa9.65□□□□□ -0.86
GARNL3-219ENST00000495172 OAZ2O95190 189 aa9.65□□□□□ -0.86
GARNL3-219ENST00000495172 CD6P30203 668 aa9.65□□□□□ -0.86
GARNL3-219ENST00000495172 CCT8P50990 548 aa9.65□□□□□ -0.86
GARNL3-219ENST00000495172 FOSBP53539 338 aa9.65□□□□□ -0.86
GARNL3-219ENST00000495172 RESTQ13127 1097 aa9.65□□□□□ -0.86
GARNL3-219ENST00000495172 VEPH1Q14D04 833 aa9.65□□□□□ -0.86
GARNL3-219ENST00000495172 DHCR24Q15392 516 aa9.65□□□□□ -0.86
GARNL3-219ENST00000495172 NT5DC1Q5TFE4 455 aa9.65□□□□□ -0.86
GARNL3-219ENST00000495172 ALKAL1Q6UXT8 129 aa9.65□□□□□ -0.86
GARNL3-219ENST00000495172 CCDC81Q6ZN84 652 aa9.65□□□□□ -0.86
GARNL3-219ENST00000495172 FAM124AQ86V42 546 aa9.65□□□□□ -0.86
GARNL3-219ENST00000495172 ZNF578Q96N58 590 aaPredicted RBP9.65□□□□□ -0.86
GARNL3-219ENST00000495172 ARHGAP9Q9BRR9 750 aa9.65□□□□□ -0.86
GARNL3-219ENST00000495172 SLKQ9H2G2 1235 aaPredicted RBP9.65□□□□□ -0.86
GARNL3-219ENST00000495172 ASCL3Q9NQ33 180 aa9.65□□□□□ -0.86
GARNL3-219ENST00000495172 PRMT7Q9NVM4 692 aaPredicted RBP9.65□□□□□ -0.86
GARNL3-219ENST00000495172 PCDHGA1Q9Y5H4 931 aa9.65□□□□□ -0.86
GARNL3-219ENST00000495172 SLC12A7Q9Y666 1083 aa9.65□□□□□ -0.86
GARNL3-219ENST00000495172 APCP25054 2843 aa9.65□□□□□ -0.86
GARNL3-219ENST00000495172 SDK2Q58EX2 2172 aa9.65□□□□□ -0.86
GARNL3-219ENST00000495172 KIF26BQ2KJY2 2108 aa9.65□□□□□ -0.86
GARNL3-219ENST00000495172 CITO14578 2027 aa9.65□□□□□ -0.87
GARNL3-219ENST00000495172 SPG11Q96JI7 2443 aa9.64□□□□□ -0.87
GARNL3-219ENST00000495172 A0A1W2PNU3 283 aaPredicted RBP9.64□□□□□ -0.87
GARNL3-219ENST00000495172 E2F8A0AVK6 867 aa9.64□□□□□ -0.87
GARNL3-219ENST00000495172 MYMKA6NI61 221 aa9.64□□□□□ -0.87
GARNL3-219ENST00000495172 PCDHGA12O60330 932 aa9.64□□□□□ -0.87
GARNL3-219ENST00000495172 ZNF217O75362 1048 aa9.64□□□□□ -0.87
GARNL3-219ENST00000495172 NFATC1O95644 943 aa9.64□□□□□ -0.87
GARNL3-219ENST00000495172 MS4A1P11836 297 aa9.64□□□□□ -0.87
GARNL3-219ENST00000495172 ATP2C1P98194 919 aaPredicted RBP9.64□□□□□ -0.87
GARNL3-219ENST00000495172 POU5F1BQ06416 359 aa9.64□□□□□ -0.87
GARNL3-219ENST00000495172 ZNF268Q14587 947 aaPredicted RBP9.64□□□□□ -0.87
GARNL3-219ENST00000495172 SEZ6Q53EL9 994 aa9.64□□□□□ -0.87
GARNL3-219ENST00000495172 RHBDF2Q6PJF5 856 aa9.64□□□□□ -0.87
GARNL3-219ENST00000495172 CASC1Q6TDU7 716 aa9.64□□□□□ -0.87
GARNL3-219ENST00000495172 LRRTM3Q86VH5 581 aa9.64□□□□□ -0.87
GARNL3-219ENST00000495172 DCBLD1Q8N8Z6 715 aa9.64□□□□□ -0.87
GARNL3-219ENST00000495172 MRPS31Q92665 395 aaKnown RBP9.64□□□□□ -0.87
GARNL3-219ENST00000495172 NFKBIZQ9BYH8 718 aa9.64□□□□□ -0.87
GARNL3-219ENST00000495172 WSB2Q9NYS7 404 aaPredicted RBP9.64□□□□□ -0.87
GARNL3-219ENST00000495172 NIPBLQ6KC79 2804 aaeCLIP9.63□□□□□ -0.87
GARNL3-219ENST00000495172 TBC1D3BA6NDS4 549 aa9.63□□□□□ -0.87
GARNL3-219ENST00000495172 USO1O60763 962 aaKnown RBP9.63□□□□□ -0.87
GARNL3-219ENST00000495172 DIAPH2O60879 1101 aa9.63□□□□□ -0.87
GARNL3-219ENST00000495172 P4HBP07237 508 aaKnown RBP9.63□□□□□ -0.87
GARNL3-219ENST00000495172 CDC27P30260 824 aa9.63□□□□□ -0.87
GARNL3-219ENST00000495172 GRIA2P42262 883 aa9.63□□□□□ -0.87
GARNL3-219ENST00000495172 SHBQ15464 509 aa9.63□□□□□ -0.87
GARNL3-219ENST00000495172 C10orf76Q5T2E6 689 aa9.63□□□□□ -0.87
GARNL3-219ENST00000495172 CDCA2Q69YH5 1023 aaPredicted RBP9.63□□□□□ -0.87
GARNL3-219ENST00000495172 TBCKQ8TEA7 893 aa9.63□□□□□ -0.87
GARNL3-219ENST00000495172 ADPGKQ9BRR6 497 aa9.63□□□□□ -0.87
GARNL3-219ENST00000495172 TRIM9Q9C026 710 aa9.63□□□□□ -0.87
GARNL3-219ENST00000495172 ZMYND12Q9H0C1 365 aa9.63□□□□□ -0.87
GARNL3-219ENST00000495172 CCDC113Q9H0I3 377 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms