RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 HNRNPABQ99729 332 aaKnown RBP11.79□□□□□ -0.52
APTX-230ENST00000494649 LRRC3Q9BY71 257 aa11.79□□□□□ -0.52
APTX-230ENST00000494649 SMG9Q9H0W8 520 aaKnown RBP11.79□□□□□ -0.52
APTX-230ENST00000494649 DMAP1Q9NPF5 467 aaPredicted RBP11.79□□□□□ -0.52
APTX-230ENST00000494649 MAFFQ9ULX9 164 aa11.79□□□□□ -0.52
APTX-230ENST00000494649 SIK3Q9Y2K2 1263 aa11.79□□□□□ -0.52
APTX-230ENST00000494649 MYH10P35580 1976 aa11.79□□□□□ -0.52
APTX-230ENST00000494649 PTPRDP23468 1912 aa11.78□□□□□ -0.52
APTX-230ENST00000494649 LRRC10BA6NIK2 292 aa11.78□□□□□ -0.52
APTX-230ENST00000494649 TRIM66O15016 1216 aa11.78□□□□□ -0.52
APTX-230ENST00000494649 MOSPD3O75425 235 aa11.78□□□□□ -0.52
APTX-230ENST00000494649 MAGEA11P43364 429 aa11.78□□□□□ -0.52
APTX-230ENST00000494649 SLC5A3P53794 718 aa11.78□□□□□ -0.52
APTX-230ENST00000494649 PRSS36Q5K4E3 855 aa11.78□□□□□ -0.52
APTX-230ENST00000494649 NPAS3Q8IXF0 933 aa11.78□□□□□ -0.52
APTX-230ENST00000494649 FAXDC2Q96IV6 333 aa11.78□□□□□ -0.52
APTX-230ENST00000494649 GPR88Q9GZN0 384 aa11.78□□□□□ -0.52
APTX-230ENST00000494649 SMOC2Q9H3U7 446 aa11.78□□□□□ -0.52
APTX-230ENST00000494649 RTN4Q9NQC3 1192 aaKnown RBP11.78□□□□□ -0.52
APTX-230ENST00000494649 HSFX1Q9UBD0 423 aa11.78□□□□□ -0.52
APTX-230ENST00000494649 ATP8B3O60423 1300 aa11.78□□□□□ -0.52
APTX-230ENST00000494649 CUL9Q8IWT3 2517 aa11.77□□□□□ -0.52
APTX-230ENST00000494649 M0QYV0 167 aa11.77□□□□□ -0.52
APTX-230ENST00000494649 THAP12O43422 761 aa11.77□□□□□ -0.52
APTX-230ENST00000494649 CSH1P0DML2 217 aa11.77□□□□□ -0.52
APTX-230ENST00000494649 CSH2P0DML3 217 aa11.77□□□□□ -0.52
APTX-230ENST00000494649 GNA15P30679 374 aa11.77□□□□□ -0.52
APTX-230ENST00000494649 ZNF445P59923 1031 aa11.77□□□□□ -0.52
APTX-230ENST00000494649 TXNDC8Q6A555 127 aa11.77□□□□□ -0.52
APTX-230ENST00000494649 TMEM150AQ86TG1 271 aa11.77□□□□□ -0.52
APTX-230ENST00000494649 SLC47A2Q86VL8 602 aa11.77□□□□□ -0.52
APTX-230ENST00000494649 GAS2L3Q86XJ1 694 aa11.77□□□□□ -0.52
APTX-230ENST00000494649 PASD1Q8IV76 773 aa11.77□□□□□ -0.52
APTX-230ENST00000494649 GJD3Q8N144 294 aa11.77□□□□□ -0.52
APTX-230ENST00000494649 GANQ9H2C0 597 aa11.77□□□□□ -0.52
APTX-230ENST00000494649 IL21Q9HBE4 155 aa11.77□□□□□ -0.52
APTX-230ENST00000494649 TRPC7Q9HCX4 862 aa11.77□□□□□ -0.52
APTX-230ENST00000494649 PLCB1Q9NQ66 1216 aa11.77□□□□□ -0.52
APTX-230ENST00000494649 IFNKQ9P0W0 207 aa11.77□□□□□ -0.52
APTX-230ENST00000494649 CHORDC1Q9UHD1 332 aaPredicted RBP11.77□□□□□ -0.52
APTX-230ENST00000494649 O00370 1275 aa11.77□□□□□ -0.53
APTX-230ENST00000494649 TADA3O75528 432 aa11.77□□□□□ -0.53
APTX-230ENST00000494649 NPR3P17342 541 aa11.77□□□□□ -0.53
APTX-230ENST00000494649 RGS7P49802 495 aa11.77□□□□□ -0.53
APTX-230ENST00000494649 ZNF132P52740 706 aa11.77□□□□□ -0.53
APTX-230ENST00000494649 UBASH3AP57075 661 aa11.77□□□□□ -0.53
APTX-230ENST00000494649 ARID5AQ03989 594 aa11.77□□□□□ -0.53
APTX-230ENST00000494649 PDE4CQ08493 712 aa11.77□□□□□ -0.53
APTX-230ENST00000494649 FILIP1LQ4L180 1135 aa11.77□□□□□ -0.53
APTX-230ENST00000494649 RTL10Q7L3V2 364 aa11.77□□□□□ -0.53
APTX-230ENST00000494649 OTOP3Q7RTS5 596 aa11.77□□□□□ -0.53
APTX-230ENST00000494649 TTC39CQ8N584 583 aa11.77□□□□□ -0.53
APTX-230ENST00000494649 MAB21L3Q8N8X9 362 aa11.77□□□□□ -0.53
APTX-230ENST00000494649 NEK11Q8NG66 645 aa11.77□□□□□ -0.53
APTX-230ENST00000494649 SHC3Q92529 594 aa11.77□□□□□ -0.53
APTX-230ENST00000494649 NDRG1Q92597 394 aaKnown RBP11.77□□□□□ -0.53
APTX-230ENST00000494649 KHSRPQ92945 711 aaKnown RBP eCLIP11.77□□□□□ -0.536e-6■□□□□ 9.5
APTX-230ENST00000494649 ACSF2Q96CM8 615 aaPredicted RBP11.77□□□□□ -0.53
APTX-230ENST00000494649 C8orf48Q96LL4 319 aa11.77□□□□□ -0.53
APTX-230ENST00000494649 RPP25Q9BUL9 199 aaKnown RBP11.77□□□□□ -0.53
APTX-230ENST00000494649 DUSP16Q9BY84 665 aa11.77□□□□□ -0.53
APTX-230ENST00000494649 TTC28Q96AY4 2481 aa11.77□□□□□ -0.53
APTX-230ENST00000494649 DENND4AQ7Z401 1863 aa11.76□□□□□ -0.53
APTX-230ENST00000494649 A0A1B0GTH6 734 aa11.76□□□□□ -0.53
APTX-230ENST00000494649 GFPT2O94808 682 aa11.76□□□□□ -0.53
APTX-230ENST00000494649 MICAL2O94851 1124 aa11.76□□□□□ -0.53
APTX-230ENST00000494649 CAVIN2O95810 425 aa11.76□□□□□ -0.53
APTX-230ENST00000494649 VDRP11473 427 aa11.76□□□□□ -0.53
APTX-230ENST00000494649 LAMP2P13473 410 aa11.76□□□□□ -0.53
APTX-230ENST00000494649 PGFP49763 221 aa11.76□□□□□ -0.53
APTX-230ENST00000494649 TAF10Q12962 218 aa11.76□□□□□ -0.53
APTX-230ENST00000494649 GPR158Q5T848 1215 aa11.76□□□□□ -0.53
APTX-230ENST00000494649 TAF3Q5VWG9 929 aa11.76□□□□□ -0.53
APTX-230ENST00000494649 PARM1Q6UWI2 310 aa11.76□□□□□ -0.53
APTX-230ENST00000494649 CYP26C1Q6V0L0 522 aa11.76□□□□□ -0.53
APTX-230ENST00000494649 PIGZQ86VD9 579 aa11.76□□□□□ -0.53
APTX-230ENST00000494649 NUP93Q8N1F7 819 aa11.76□□□□□ -0.53
APTX-230ENST00000494649 FGF14Q92915 247 aa11.76□□□□□ -0.53
APTX-230ENST00000494649 CYP2S1Q96SQ9 504 aa11.76□□□□□ -0.53
APTX-230ENST00000494649 KXD1Q9BQD3 176 aa11.76□□□□□ -0.53
APTX-230ENST00000494649 NAA15Q9BXJ9 866 aaKnown RBP11.76□□□□□ -0.53
APTX-230ENST00000494649 RBSNQ9H1K0 784 aa11.76□□□□□ -0.53
APTX-230ENST00000494649 HESX1Q9UBX0 185 aa11.76□□□□□ -0.53
APTX-230ENST00000494649 MUTYHQ9UIF7 546 aa11.76□□□□□ -0.53
APTX-230ENST00000494649 CDH7Q9ULB5 785 aa11.76□□□□□ -0.53
APTX-230ENST00000494649 NR2E1Q9Y466 385 aa11.76□□□□□ -0.53
APTX-230ENST00000494649 ASB3Q9Y575 518 aa11.76□□□□□ -0.53
APTX-230ENST00000494649 C2orf78A6NCI8 922 aa11.75□□□□□ -0.53
APTX-230ENST00000494649 LOC730098B7Z3J9 87 aa11.75□□□□□ -0.53
APTX-230ENST00000494649 HHLA1C9JL84 531 aa11.75□□□□□ -0.53
APTX-230ENST00000494649 F8VZ95 297 aa11.75□□□□□ -0.53
APTX-230ENST00000494649 PAPLNO95428 1278 aa11.75□□□□□ -0.53
APTX-230ENST00000494649 PAEPP09466 180 aa11.75□□□□□ -0.53
APTX-230ENST00000494649 CLCN1P35523 988 aa11.75□□□□□ -0.53
APTX-230ENST00000494649 VIPR2P41587 438 aa11.75□□□□□ -0.53
APTX-230ENST00000494649 ARHGAP17Q68EM7 881 aa11.75□□□□□ -0.53
APTX-230ENST00000494649 ENOSF1Q7L5Y1 443 aa11.75□□□□□ -0.53
APTX-230ENST00000494649 ANKRD52Q8NB46 1076 aa11.75□□□□□ -0.53
APTX-230ENST00000494649 ZSCAN18Q8TBC5 510 aaPredicted RBP11.75□□□□□ -0.53
APTX-230ENST00000494649 SECISBP2LQ93073 1101 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms