RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 KHNYNO15037 678 aaKnown RBP10.29□□□□□ -0.76
UBR4-216ENST00000494503 MAP3K13O43283 966 aa10.29□□□□□ -0.76
UBR4-216ENST00000494503 KCNK5O95279 499 aa10.29□□□□□ -0.76
UBR4-216ENST00000494503 TNNI1P19237 187 aa10.29□□□□□ -0.76
UBR4-216ENST00000494503 LMO2P25791 158 aa10.29□□□□□ -0.76
UBR4-216ENST00000494503 TNNC1P63316 161 aa10.29□□□□□ -0.76
UBR4-216ENST00000494503 KDSRQ06136 332 aa10.29□□□□□ -0.76
UBR4-216ENST00000494503 FOXC1Q12948 553 aa10.29□□□□□ -0.76
UBR4-216ENST00000494503 MAPRE1Q15691 268 aaKnown RBP10.29□□□□□ -0.76
UBR4-216ENST00000494503 DUOXA2Q1HG44 320 aa10.29□□□□□ -0.76
UBR4-216ENST00000494503 SOWAHAQ2M3V2 549 aa10.29□□□□□ -0.76
UBR4-216ENST00000494503 CFAP221Q4G0U5 840 aa10.29□□□□□ -0.76
UBR4-216ENST00000494503 DAB2IPQ5VWQ8 1189 aa10.29□□□□□ -0.76
UBR4-216ENST00000494503 DENND5BQ6ZUT9 1274 aa10.29□□□□□ -0.76
UBR4-216ENST00000494503 FILIP1Q7Z7B0 1213 aa10.29□□□□□ -0.76
UBR4-216ENST00000494503 OR5B17Q8NGF7 314 aa10.29□□□□□ -0.76
UBR4-216ENST00000494503 OR6B3Q8NGW1 331 aa10.29□□□□□ -0.76
UBR4-216ENST00000494503 HPS3Q969F9 1004 aa10.29□□□□□ -0.76
UBR4-216ENST00000494503 CCDC127Q96BQ5 260 aa10.29□□□□□ -0.76
UBR4-216ENST00000494503 DNAJC19Q96DA6 116 aa10.29□□□□□ -0.76
UBR4-216ENST00000494503 FUBP3Q96I24 572 aaKnown RBP eCLIP10.29□□□□□ -0.76
UBR4-216ENST00000494503 ZC3H10Q96K80 434 aaKnown RBP10.29□□□□□ -0.76
UBR4-216ENST00000494503 MYRFLQ96LU7 910 aa10.29□□□□□ -0.76
UBR4-216ENST00000494503 FNBP1Q96RU3 617 aa10.29□□□□□ -0.76
UBR4-216ENST00000494503 NACA2Q9H009 215 aa10.29□□□□□ -0.76
UBR4-216ENST00000494503 DUSP15Q9H1R2 295 aaPredicted RBP10.29□□□□□ -0.76
UBR4-216ENST00000494503 OLFML3Q9NRN5 406 aa10.29□□□□□ -0.76
UBR4-216ENST00000494503 GDAP2Q9NXN4 497 aa10.29□□□□□ -0.76
UBR4-216ENST00000494503 EHD2Q9NZN4 543 aa10.29□□□□□ -0.76
UBR4-216ENST00000494503 SIX4Q9UIU6 781 aa10.29□□□□□ -0.76
UBR4-216ENST00000494503 CDH9Q9ULB4 789 aa10.29□□□□□ -0.76
UBR4-216ENST00000494503 SRPRBQ9Y5M8 271 aaKnown RBP10.29□□□□□ -0.76
UBR4-216ENST00000494503 MYO18AQ92614 2054 aaKnown RBP10.29□□□□□ -0.76
UBR4-216ENST00000494503 PI4KAP42356 2102 aa10.28□□□□□ -0.76
UBR4-216ENST00000494503 F8VP50 259 aa10.28□□□□□ -0.76
UBR4-216ENST00000494503 LEFTY2O00292 366 aa10.28□□□□□ -0.76
UBR4-216ENST00000494503 ALDH1A2O94788 518 aa10.28□□□□□ -0.76
UBR4-216ENST00000494503 MBL2P11226 248 aaPredicted RBP10.28□□□□□ -0.76
UBR4-216ENST00000494503 TIE1P35590 1138 aa10.28□□□□□ -0.76
UBR4-216ENST00000494503 CYP2J2P51589 502 aa10.28□□□□□ -0.76
UBR4-216ENST00000494503 USP46P62068 366 aa10.28□□□□□ -0.76
UBR4-216ENST00000494503 ASIC1P78348 528 aa10.28□□□□□ -0.76
UBR4-216ENST00000494503 ZNF252P-AS1Q0IIN9 211 aa10.28□□□□□ -0.76
UBR4-216ENST00000494503 RESTQ13127 1097 aa10.28□□□□□ -0.76
UBR4-216ENST00000494503 TRPC3Q13507 836 aa10.28□□□□□ -0.76
UBR4-216ENST00000494503 STK38Q15208 465 aa10.28□□□□□ -0.76
UBR4-216ENST00000494503 SURF1Q15526 300 aa10.28□□□□□ -0.76
UBR4-216ENST00000494503 PLA2G2CQ5R387 149 aa10.28□□□□□ -0.76
UBR4-216ENST00000494503 TDRD10Q5VZ19 366 aaKnown RBP10.28□□□□□ -0.76
UBR4-216ENST00000494503 VSTM1Q6UX27 236 aa10.28□□□□□ -0.76
UBR4-216ENST00000494503 CBWD2Q8IUF1 395 aa10.28□□□□□ -0.76
UBR4-216ENST00000494503 SPATA18Q8TC71 538 aa10.28□□□□□ -0.76
UBR4-216ENST00000494503 PIGKQ92643 395 aa10.28□□□□□ -0.76
UBR4-216ENST00000494503 PCED1BQ96HM7 432 aa10.28□□□□□ -0.76
UBR4-216ENST00000494503 SPACA7Q96KW9 195 aa10.28□□□□□ -0.76
UBR4-216ENST00000494503 SLITRK1Q96PX8 696 aa10.28□□□□□ -0.76
UBR4-216ENST00000494503 MED10Q9BTT4 135 aa10.28□□□□□ -0.76
UBR4-216ENST00000494503 LSM14BQ9BX40 385 aaKnown RBP10.28□□□□□ -0.76
UBR4-216ENST00000494503 ZDHHC4Q9NPG8 344 aa10.28□□□□□ -0.76
UBR4-216ENST00000494503 CRTAC1Q9NQ79 661 aa10.28□□□□□ -0.76
UBR4-216ENST00000494503 INTS13Q9NVM9 706 aa10.28□□□□□ -0.76
UBR4-216ENST00000494503 HSPBP1Q9NZL4 362 aa10.28□□□□□ -0.76
UBR4-216ENST00000494503 CFAP97Q9P2B7 532 aa10.28□□□□□ -0.76
UBR4-216ENST00000494503 ARHGAP26Q9UNA1 814 aa10.28□□□□□ -0.76
UBR4-216ENST00000494503 CPQQ9Y646 472 aa10.28□□□□□ -0.76
UBR4-216ENST00000494503 PTPRJQ12913 1337 aa10.28□□□□□ -0.76
UBR4-216ENST00000494503 LAMA1P25391 3075 aa10.27□□□□□ -0.76
UBR4-216ENST00000494503 LNP1A1A4G5 178 aa10.27□□□□□ -0.77
UBR4-216ENST00000494503 BCLAF3A2AJT9 711 aaKnown RBP10.27□□□□□ -0.77
UBR4-216ENST00000494503 GABRDO14764 452 aa10.27□□□□□ -0.77
UBR4-216ENST00000494503 GIPC1O14908 333 aa10.27□□□□□ -0.77
UBR4-216ENST00000494503 PHACTR2O75167 634 aa10.27□□□□□ -0.77
UBR4-216ENST00000494503 KLF8O95600 359 aaPredicted RBP10.27□□□□□ -0.77
UBR4-216ENST00000494503 ADH1CP00326 375 aa10.27□□□□□ -0.77
UBR4-216ENST00000494503 APODP05090 189 aa10.27□□□□□ -0.77
UBR4-216ENST00000494503 BCKDHBP21953 392 aa10.27□□□□□ -0.77
UBR4-216ENST00000494503 PMLP29590 882 aa10.27□□□□□ -0.77
UBR4-216ENST00000494503 GNL1P36915 607 aaPredicted RBP10.27□□□□□ -0.77
UBR4-216ENST00000494503 MAGEA11P43364 429 aa10.27□□□□□ -0.77
UBR4-216ENST00000494503 MAPK8P45983 427 aa10.27□□□□□ -0.77
UBR4-216ENST00000494503 SH3PXD2AQ5TCZ1 1133 aa10.27□□□□□ -0.77
UBR4-216ENST00000494503 C11orf74Q86VG3 221 aa10.27□□□□□ -0.77
UBR4-216ENST00000494503 NELFCDQ8IXH7 590 aa10.27□□□□□ -0.77
UBR4-216ENST00000494503 ALLCQ8N6M5 410 aa10.27□□□□□ -0.77
UBR4-216ENST00000494503 TXNDC5Q8NBS9 432 aaKnown RBP10.27□□□□□ -0.77
UBR4-216ENST00000494503 SPRYD3Q8NCJ5 442 aa10.27□□□□□ -0.77
UBR4-216ENST00000494503 GLIS3Q8NEA6 775 aa10.27□□□□□ -0.77
UBR4-216ENST00000494503 MDGA1Q8NFP4 955 aa10.27□□□□□ -0.77
UBR4-216ENST00000494503 USP33Q8TEY7 942 aa10.27□□□□□ -0.77
UBR4-216ENST00000494503 KBTBD7Q8WVZ9 684 aa10.27□□□□□ -0.77
UBR4-216ENST00000494503 HMGB4Q8WW32 186 aa10.27□□□□□ -0.77
UBR4-216ENST00000494503 RLN3Q8WXF3 142 aa10.27□□□□□ -0.77
UBR4-216ENST00000494503 EZH1Q92800 747 aaPredicted RBP10.27□□□□□ -0.77
UBR4-216ENST00000494503 DHX58Q96C10 678 aa10.27□□□□□ -0.77
UBR4-216ENST00000494503 ERLEC1Q96DZ1 483 aa10.27□□□□□ -0.77
UBR4-216ENST00000494503 PKMYT1Q99640 499 aa10.27□□□□□ -0.77
UBR4-216ENST00000494503 MRPL45Q9BRJ2 306 aaKnown RBP10.27□□□□□ -0.77
UBR4-216ENST00000494503 STRA6Q9BX79 667 aa10.27□□□□□ -0.77
UBR4-216ENST00000494503 TMEM9BQ9NQ34 198 aa10.27□□□□□ -0.77
UBR4-216ENST00000494503 GCNT4Q9P109 453 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms