RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 DENND5BQ6ZUT9 1274 aa14.04□□□□□ -0.16
ERCC3-209ENST00000494464 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.04□□□□□ -0.16
ERCC3-209ENST00000494464 MON1AQ86VX9 555 aa14.04□□□□□ -0.16
ERCC3-209ENST00000494464 ZC3H3Q8IXZ2 948 aaKnown RBP14.04□□□□□ -0.16
ERCC3-209ENST00000494464 MAB21L3Q8N8X9 362 aa14.04□□□□□ -0.16
ERCC3-209ENST00000494464 TNIP3Q96KP6 325 aa14.04□□□□□ -0.16
ERCC3-209ENST00000494464 C8orf48Q96LL4 319 aa14.04□□□□□ -0.16
ERCC3-209ENST00000494464 LRRC3BQ96PB8 259 aa14.04□□□□□ -0.16
ERCC3-209ENST00000494464 PHOX2BQ99453 314 aa14.04□□□□□ -0.16
ERCC3-209ENST00000494464 TTLL2Q9BWV7 592 aa14.04□□□□□ -0.16
ERCC3-209ENST00000494464 BCO2Q9BYV7 579 aa14.04□□□□□ -0.16
ERCC3-209ENST00000494464 IMPG2Q9BZV3 1241 aa14.04□□□□□ -0.16
ERCC3-209ENST00000494464 SDCBP2Q9H190 292 aa14.04□□□□□ -0.16
ERCC3-209ENST00000494464 EHD2Q9NZN4 543 aa14.04□□□□□ -0.16
ERCC3-209ENST00000494464 DACH1Q9UI36 760 aa14.04□□□□□ -0.16
ERCC3-209ENST00000494464 PIAS3Q9Y6X2 628 aa14.04□□□□□ -0.16
ERCC3-209ENST00000494464 PIEZO1Q92508 2521 aa14.04□□□□□ -0.16
ERCC3-209ENST00000494464 FAM170BA6NMN3 283 aa14.03□□□□□ -0.16
ERCC3-209ENST00000494464 SMTNL1A8MU46 457 aa14.03□□□□□ -0.16
ERCC3-209ENST00000494464 NCAM2O15394 837 aa14.03□□□□□ -0.16
ERCC3-209ENST00000494464 LRRN2O75325 713 aa14.03□□□□□ -0.16
ERCC3-209ENST00000494464 CLSTN1O94985 981 aa14.03□□□□□ -0.16
ERCC3-209ENST00000494464 TRIM49P0CI25 452 aa14.03□□□□□ -0.16
ERCC3-209ENST00000494464 TRIM49CP0CI26 452 aa14.03□□□□□ -0.16
ERCC3-209ENST00000494464 CD72P21854 359 aa14.03□□□□□ -0.16
ERCC3-209ENST00000494464 CDC25BP30305 580 aa14.03□□□□□ -0.16
ERCC3-209ENST00000494464 GTF2H1P32780 548 aa14.03□□□□□ -0.16
ERCC3-209ENST00000494464 GRIK1P39086 918 aa14.03□□□□□ -0.16
ERCC3-209ENST00000494464 ASPAP45381 313 aa14.03□□□□□ -0.16
ERCC3-209ENST00000494464 RAP1GAPP47736 663 aa14.03□□□□□ -0.16
ERCC3-209ENST00000494464 CDH8P55286 799 aa14.03□□□□□ -0.16
ERCC3-209ENST00000494464 TPM4P67936 248 aa14.03□□□□□ -0.16
ERCC3-209ENST00000494464 NOP14P78316 857 aaKnown RBP14.03□□□□□ -0.16
ERCC3-209ENST00000494464 PPP3CAQ08209 521 aa14.03□□□□□ -0.16
ERCC3-209ENST00000494464 MORC3Q14149 939 aa14.03□□□□□ -0.16
ERCC3-209ENST00000494464 ALYREFQ86V81 257 aaKnown RBP14.03□□□□□ -0.16
ERCC3-209ENST00000494464 ZNF687Q8N1G0 1237 aa14.03□□□□□ -0.16
ERCC3-209ENST00000494464 AOPEPQ8N6M6 819 aa14.03□□□□□ -0.16
ERCC3-209ENST00000494464 MLKLQ8NB16 471 aa14.03□□□□□ -0.16
ERCC3-209ENST00000494464 CSGALNACT1Q8TDX6 532 aa14.03□□□□□ -0.16
ERCC3-209ENST00000494464 CLDN23Q96B33 292 aa14.03□□□□□ -0.16
ERCC3-209ENST00000494464 ZNF518BQ9C0D4 1074 aa14.03□□□□□ -0.16
ERCC3-209ENST00000494464 TMEM8AQ9HCN3 771 aa14.03□□□□□ -0.16
ERCC3-209ENST00000494464 MAN1B1Q9UKM7 699 aa14.03□□□□□ -0.16
ERCC3-209ENST00000494464 MTF2Q9Y483 593 aaPredicted RBP14.03□□□□□ -0.16
ERCC3-209ENST00000494464 ATP8B3O60423 1300 aa14.03□□□□□ -0.16
ERCC3-209ENST00000494464 MYO15AQ9UKN7 3530 aa14.03□□□□□ -0.16
ERCC3-209ENST00000494464 FANCMQ8IYD8 2048 aa14.02□□□□□ -0.16
ERCC3-209ENST00000494464 F8VP50 259 aa14.02□□□□□ -0.17
ERCC3-209ENST00000494464 BIN1O00499 593 aa14.02□□□□□ -0.17
ERCC3-209ENST00000494464 CETN3O15182 167 aa14.02□□□□□ -0.17
ERCC3-209ENST00000494464 SLC16A3O15427 465 aaKnown RBP14.02□□□□□ -0.17
ERCC3-209ENST00000494464 EPB41P11171 864 aaKnown RBP14.02□□□□□ -0.17
ERCC3-209ENST00000494464 PFKLP17858 780 aa14.02□□□□□ -0.17
ERCC3-209ENST00000494464 GCLMP48507 274 aa14.02□□□□□ -0.17
ERCC3-209ENST00000494464 PDE6CP51160 858 aa14.02□□□□□ -0.17
ERCC3-209ENST00000494464 LRRC63Q05C16 580 aa14.02□□□□□ -0.17
ERCC3-209ENST00000494464 INCA1Q0VD86 236 aa14.02□□□□□ -0.17
ERCC3-209ENST00000494464 TXNDC8Q6A555 127 aa14.02□□□□□ -0.17
ERCC3-209ENST00000494464 UNC93AQ86WB7 457 aa14.02□□□□□ -0.17
ERCC3-209ENST00000494464 C1orf210Q8IVY1 113 aa14.02□□□□□ -0.17
ERCC3-209ENST00000494464 USP13Q92995 863 aaPredicted RBP14.02□□□□□ -0.17
ERCC3-209ENST00000494464 TSG101Q99816 390 aa14.02□□□□□ -0.17
ERCC3-209ENST00000494464 IER2Q9BTL4 223 aa14.02□□□□□ -0.17
ERCC3-209ENST00000494464 B3GNT5Q9BYG0 378 aa14.02□□□□□ -0.17
ERCC3-209ENST00000494464 C8orf33Q9H7E9 229 aaPredicted RBP14.02□□□□□ -0.17
ERCC3-209ENST00000494464 TDP1Q9NUW8 608 aa14.02□□□□□ -0.17
ERCC3-209ENST00000494464 TMEM30AQ9NV96 361 aa14.02□□□□□ -0.17
ERCC3-209ENST00000494464 TRAV19A0A0A6YYK7 116 aa14.01□□□□□ -0.17
ERCC3-209ENST00000494464 PPP1R2P41236 205 aa14.01□□□□□ -0.17
ERCC3-209ENST00000494464 MXI1P50539 228 aa14.01□□□□□ -0.17
ERCC3-209ENST00000494464 ZNF75DP51815 510 aa14.01□□□□□ -0.17
ERCC3-209ENST00000494464 CACNA2D1P54289 1103 aa14.01□□□□□ -0.17
ERCC3-209ENST00000494464 USP46P62068 366 aa14.01□□□□□ -0.17
ERCC3-209ENST00000494464 USP4Q13107 963 aa14.01□□□□□ -0.17
ERCC3-209ENST00000494464 FZD5Q13467 585 aa14.01□□□□□ -0.17
ERCC3-209ENST00000494464 KRT39Q6A163 491 aa14.01□□□□□ -0.17
ERCC3-209ENST00000494464 SPOPLQ6IQ16 392 aa14.01□□□□□ -0.17
ERCC3-209ENST00000494464 FAM35AQ86V20 835 aa14.01□□□□□ -0.17
ERCC3-209ENST00000494464 RALGPS2Q86X27 583 aaPredicted RBP14.01□□□□□ -0.17
ERCC3-209ENST00000494464 ADSSL1Q8N142 457 aa14.01□□□□□ -0.17
ERCC3-209ENST00000494464 TAS1R2Q8TE23 839 aa14.01□□□□□ -0.17
ERCC3-209ENST00000494464 FAM3CQ92520 227 aa14.01□□□□□ -0.17
ERCC3-209ENST00000494464 ELMO3Q96BJ8 720 aa14.01□□□□□ -0.17
ERCC3-209ENST00000494464 SMARCD1Q96GM5 515 aa14.01□□□□□ -0.17
ERCC3-209ENST00000494464 MRFAP1L1Q96HT8 127 aa14.01□□□□□ -0.17
ERCC3-209ENST00000494464 FAXDC2Q96IV6 333 aa14.01□□□□□ -0.17
ERCC3-209ENST00000494464 NIF3L1Q9GZT8 377 aa14.01□□□□□ -0.17
ERCC3-209ENST00000494464 SMG9Q9H0W8 520 aaKnown RBP14.01□□□□□ -0.17
ERCC3-209ENST00000494464 CYP3A43Q9HB55 503 aa14.01□□□□□ -0.17
ERCC3-209ENST00000494464 THG1LQ9NWX6 298 aaKnown RBP14.01□□□□□ -0.17
ERCC3-209ENST00000494464 CCL26Q9Y258 94 aa14.01□□□□□ -0.17
ERCC3-209ENST00000494464 USP34Q70CQ2 3546 aa14.01□□□□□ -0.17
ERCC3-209ENST00000494464 ESPNB1AK53 854 aa14□□□□□ -0.17
ERCC3-209ENST00000494464 STX10O60499 249 aa14□□□□□ -0.17
ERCC3-209ENST00000494464 CKMP06732 381 aa14□□□□□ -0.17
ERCC3-209ENST00000494464 TPM3P06753 285 aa14□□□□□ -0.17
ERCC3-209ENST00000494464 USP17L7P0C7H9 530 aa14□□□□□ -0.17
ERCC3-209ENST00000494464 TCF3P15923 654 aa14□□□□□ -0.17
ERCC3-209ENST00000494464 CTHP32929 405 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms