RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 MYO1EQ12965 1108 aa7.3□□□□□ -1.24
SNX13-210ENST00000494402 CTBP1Q13363 440 aa7.3□□□□□ -1.24
SNX13-210ENST00000494402 TNFAIP1Q13829 316 aa7.3□□□□□ -1.24
SNX13-210ENST00000494402 NFE2L1Q14494 772 aa7.3□□□□□ -1.24
SNX13-210ENST00000494402 RABEP1Q15276 862 aa7.3□□□□□ -1.24
SNX13-210ENST00000494402 NFIL3Q16649 462 aa7.3□□□□□ -1.24
SNX13-210ENST00000494402 TTC22Q5TAA0 569 aa7.3□□□□□ -1.24
SNX13-210ENST00000494402 FAXCQ5TGI0 409 aa7.3□□□□□ -1.24
SNX13-210ENST00000494402 PRAMEF18Q5VWM3 479 aa7.3□□□□□ -1.24
SNX13-210ENST00000494402 KRT80Q6KB66 452 aa7.3□□□□□ -1.24
SNX13-210ENST00000494402 GLRX5Q86SX6 157 aa7.3□□□□□ -1.24
SNX13-210ENST00000494402 CCDC28AQ8IWP9 274 aa7.3□□□□□ -1.24
SNX13-210ENST00000494402 NPAS3Q8IXF0 933 aa7.3□□□□□ -1.24
SNX13-210ENST00000494402 TDRD5Q8NAT2 981 aaKnown RBP7.3□□□□□ -1.24
SNX13-210ENST00000494402 GPR150Q8NGU9 434 aa7.3□□□□□ -1.24
SNX13-210ENST00000494402 OR56A3Q8NH54 315 aa7.3□□□□□ -1.24
SNX13-210ENST00000494402 CPT1BQ92523 772 aa7.3□□□□□ -1.24
SNX13-210ENST00000494402 TNPO1Q92973 898 aaKnown RBP7.3□□□□□ -1.24
SNX13-210ENST00000494402 RMDN1Q96DB5 314 aa7.3□□□□□ -1.24
SNX13-210ENST00000494402 VPS39Q96JC1 886 aa7.3□□□□□ -1.24
SNX13-210ENST00000494402 LIN28AQ9H9Z2 209 aaKnown RBP7.3□□□□□ -1.24
SNX13-210ENST00000494402 SNTG1Q9NSN8 517 aa7.3□□□□□ -1.24
SNX13-210ENST00000494402 SELENONQ9NZV5 590 aa7.3□□□□□ -1.24
SNX13-210ENST00000494402 MARCH4Q9P2E8 410 aaPredicted RBP7.3□□□□□ -1.24
SNX13-210ENST00000494402 MID2Q9UJV3 735 aa7.3□□□□□ -1.24
SNX13-210ENST00000494402 CORO1CQ9ULV4 474 aaPredicted RBP7.3□□□□□ -1.24
SNX13-210ENST00000494402 TRIM17Q9Y577 477 aa7.3□□□□□ -1.24
SNX13-210ENST00000494402 ERICH4A6NGS2 130 aa7.29□□□□□ -1.24
SNX13-210ENST00000494402 SAC3D1A6NKF1 404 aa7.29□□□□□ -1.24
SNX13-210ENST00000494402 FAM25EA8MYX2 175 aa7.29□□□□□ -1.24
SNX13-210ENST00000494402 SLC27A2O14975 620 aa7.29□□□□□ -1.24
SNX13-210ENST00000494402 SART1O43290 800 aaKnown RBP7.29□□□□□ -1.24
SNX13-210ENST00000494402 STX6O43752 255 aa7.29□□□□□ -1.24
SNX13-210ENST00000494402 KINO60870 393 aaKnown RBP7.29□□□□□ -1.24
SNX13-210ENST00000494402 OPHN1O60890 802 aa7.29□□□□□ -1.24
SNX13-210ENST00000494402 LILRB5O75023 590 aa7.29□□□□□ -1.24
SNX13-210ENST00000494402 NTSR2O95665 410 aa7.29□□□□□ -1.24
SNX13-210ENST00000494402 CBX7O95931 251 aa7.29□□□□□ -1.24
SNX13-210ENST00000494402 PNPP00491 289 aa7.29□□□□□ -1.24
SNX13-210ENST00000494402 DLDP09622 509 aaKnown RBP7.29□□□□□ -1.24
SNX13-210ENST00000494402 DRD2P14416 443 aa7.29□□□□□ -1.24
SNX13-210ENST00000494402 PECAM1P16284 738 aaPredicted RBP7.29□□□□□ -1.24
SNX13-210ENST00000494402 SAT1P21673 171 aa7.29□□□□□ -1.24
SNX13-210ENST00000494402 LTKP29376 864 aa7.29□□□□□ -1.24
SNX13-210ENST00000494402 GPC3P51654 580 aa7.29□□□□□ -1.24
SNX13-210ENST00000494402 HDAC4P56524 1084 aa7.29□□□□□ -1.24
SNX13-210ENST00000494402 ZBTB16Q05516 673 aa7.29□□□□□ -1.24
SNX13-210ENST00000494402 EIF2B5Q13144 721 aaKnown RBP7.29□□□□□ -1.24
SNX13-210ENST00000494402 NFIXQ14938 502 aa7.29□□□□□ -1.24
SNX13-210ENST00000494402 SFRP5Q5T4F7 317 aa7.29□□□□□ -1.24
SNX13-210ENST00000494402 LCE2CQ5TA81 110 aa7.29□□□□□ -1.24
SNX13-210ENST00000494402 RAP1GAP2Q684P5 730 aa7.29□□□□□ -1.24
SNX13-210ENST00000494402 CCBE1Q6UXH8 406 aaPredicted RBP7.29□□□□□ -1.24
SNX13-210ENST00000494402 C20orf204Q6ZNR8 217 aa7.29□□□□□ -1.24
SNX13-210ENST00000494402 SYT13Q7L8C5 426 aa7.29□□□□□ -1.24
SNX13-210ENST00000494402 CHST3Q7LGC8 479 aa7.29□□□□□ -1.24
SNX13-210ENST00000494402 MPP5Q8N3R9 675 aa7.29□□□□□ -1.24
SNX13-210ENST00000494402 WDTC1Q8N5D0 677 aa7.29□□□□□ -1.24
SNX13-210ENST00000494402 DPP10Q8N608 796 aa7.29□□□□□ -1.24
SNX13-210ENST00000494402 POGLUT1Q8NBL1 392 aa7.29□□□□□ -1.24
SNX13-210ENST00000494402 HOXB13Q92826 284 aaPredicted RBP7.29□□□□□ -1.24
SNX13-210ENST00000494402 SYAP1Q96A49 352 aaPredicted RBP7.29□□□□□ -1.24
SNX13-210ENST00000494402 DACH2Q96NX9 599 aa7.29□□□□□ -1.24
SNX13-210ENST00000494402 TEX12Q9BXU0 123 aa7.29□□□□□ -1.24
SNX13-210ENST00000494402 VPS16Q9H269 839 aa7.29□□□□□ -1.24
SNX13-210ENST00000494402 OPA3Q9H6K4 179 aa7.29□□□□□ -1.24
SNX13-210ENST00000494402 MID1IP1Q9NPA3 183 aa7.29□□□□□ -1.24
SNX13-210ENST00000494402 PFDN4Q9NQP4 134 aa7.29□□□□□ -1.24
SNX13-210ENST00000494402 ARHGEF3Q9NR81 526 aa7.29□□□□□ -1.24
SNX13-210ENST00000494402 AKAP7Q9P0M2 348 aaPredicted RBP7.29□□□□□ -1.24
SNX13-210ENST00000494402 ZNF624Q9P2J8 865 aaPredicted RBP7.29□□□□□ -1.24
SNX13-210ENST00000494402 LAMP5Q9UJQ1 280 aa7.29□□□□□ -1.24
SNX13-210ENST00000494402 TCFL5Q9UL49 500 aa7.29□□□□□ -1.24
SNX13-210ENST00000494402 KLHL20Q9Y2M5 609 aa7.29□□□□□ -1.24
SNX13-210ENST00000494402 TELO2Q9Y4R8 837 aa7.29□□□□□ -1.24
SNX13-210ENST00000494402 EFCAB8A8MWE9 144 aa7.28□□□□□ -1.24
SNX13-210ENST00000494402 TNPO2O14787 897 aaKnown RBP7.28□□□□□ -1.24
SNX13-210ENST00000494402 ZBTB43O43298 467 aa7.28□□□□□ -1.24
SNX13-210ENST00000494402 NOL3O60936 208 aaKnown RBP7.28□□□□□ -1.24
SNX13-210ENST00000494402 ENTPD3O75355 529 aa7.28□□□□□ -1.24
SNX13-210ENST00000494402 SNX4O95219 450 aa7.28□□□□□ -1.24
SNX13-210ENST00000494402 HEXBP07686 556 aa7.28□□□□□ -1.24
SNX13-210ENST00000494402 CCDC175P0C221 793 aa7.28□□□□□ -1.24
SNX13-210ENST00000494402 CYP2A6P11509 494 aaPredicted RBP7.28□□□□□ -1.24
SNX13-210ENST00000494402 PFKLP17858 780 aa7.28□□□□□ -1.24
SNX13-210ENST00000494402 CIITAP33076 1130 aa7.28□□□□□ -1.24
SNX13-210ENST00000494402 RFC1P35251 1148 aaPredicted RBP7.28□□□□□ -1.24
SNX13-210ENST00000494402 PPARGP37231 505 aaPredicted RBP7.28□□□□□ -1.24
SNX13-210ENST00000494402 SLC6A9P48067 706 aa7.28□□□□□ -1.24
SNX13-210ENST00000494402 PIK3CGP48736 1102 aa7.28□□□□□ -1.24
SNX13-210ENST00000494402 RGS3P49796 1198 aa7.28□□□□□ -1.24
SNX13-210ENST00000494402 C17orf67Q0P5P2 114 aa7.28□□□□□ -1.24
SNX13-210ENST00000494402 PTP4A2Q12974 167 aa7.28□□□□□ -1.24
SNX13-210ENST00000494402 CBX3Q13185 183 aa7.28□□□□□ -1.24
SNX13-210ENST00000494402 OASLQ15646 514 aaKnown RBP7.28□□□□□ -1.24
SNX13-210ENST00000494402 BTBD16Q32M84 506 aa7.28□□□□□ -1.24
SNX13-210ENST00000494402 TRIM60Q495X7 471 aa7.28□□□□□ -1.24
SNX13-210ENST00000494402 ZNF805Q5CZA5 627 aa7.28□□□□□ -1.24
SNX13-210ENST00000494402 STEAP3Q658P3 488 aa7.28□□□□□ -1.24
SNX13-210ENST00000494402 MRNIPQ6NTE8 343 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms