RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 THAP4Q8WY91 577 aa7.11□□□□□ -1.27
SMC2-205ENST00000493955 SKA1Q96BD8 255 aa7.11□□□□□ -1.27
SMC2-205ENST00000493955 GRAMD1AQ96CP6 724 aa7.11□□□□□ -1.27
SMC2-205ENST00000493955 ZSWIM1Q9BR11 485 aa7.11□□□□□ -1.27
SMC2-205ENST00000493955 DDX23Q9BUQ8 820 aaKnown RBP7.11□□□□□ -1.27
SMC2-205ENST00000493955 KRTAP4-11Q9BYQ6 195 aa7.11□□□□□ -1.27
SMC2-205ENST00000493955 TRIM5Q9C035 493 aa7.11□□□□□ -1.27
SMC2-205ENST00000493955 ZHX3Q9H4I2 956 aa7.11□□□□□ -1.27
SMC2-205ENST00000493955 PPP4R1LQ9P1A2 415 aa7.11□□□□□ -1.27
SMC2-205ENST00000493955 LPAR3Q9UBY5 353 aa7.11□□□□□ -1.27
SMC2-205ENST00000493955 MRPS17Q9Y2R5 130 aaKnown RBP7.11□□□□□ -1.27
SMC2-205ENST00000493955 DUSP10Q9Y6W6 482 aa7.11□□□□□ -1.27
SMC2-205ENST00000493955 ZNF536O15090 1300 aa7.11□□□□□ -1.27
SMC2-205ENST00000493955 CCDC78A2IDD5 438 aa7.1□□□□□ -1.27
SMC2-205ENST00000493955 NPEPPSL1A6NEC2 478 aa7.1□□□□□ -1.27
SMC2-205ENST00000493955 GOLGA6L6A8MZA4 724 aa7.1□□□□□ -1.27
SMC2-205ENST00000493955 EYA2O00167 538 aa7.1□□□□□ -1.27
SMC2-205ENST00000493955 CD3EAPO15446 510 aaKnown RBP7.1□□□□□ -1.27
SMC2-205ENST00000493955 DNPH1O43598 174 aa7.1□□□□□ -1.27
SMC2-205ENST00000493955 GPANK1O95872 356 aa7.1□□□□□ -1.27
SMC2-205ENST00000493955 SRGAP2BP0DMP2 458 aa7.1□□□□□ -1.27
SMC2-205ENST00000493955 ANXA11P50995 505 aaKnown RBP7.1□□□□□ -1.27
SMC2-205ENST00000493955 PAPOLAP51003 745 aaKnown RBP7.1□□□□□ -1.27
SMC2-205ENST00000493955 OCA2Q04671 838 aa7.1□□□□□ -1.27
SMC2-205ENST00000493955 ATP1A4Q13733 1029 aa7.1□□□□□ -1.27
SMC2-205ENST00000493955 EFR3AQ14156 821 aa7.1□□□□□ -1.27
SMC2-205ENST00000493955 SPTY2D1Q68D10 685 aaPredicted RBP7.1□□□□□ -1.27
SMC2-205ENST00000493955 ABLIM2Q6H8Q1 611 aa7.1□□□□□ -1.27
SMC2-205ENST00000493955 CLNKQ7Z7G1 428 aa7.1□□□□□ -1.27
SMC2-205ENST00000493955 COLGALT2Q8IYK4 626 aa7.1□□□□□ -1.27
SMC2-205ENST00000493955 DNAJB14Q8TBM8 379 aa7.1□□□□□ -1.27
SMC2-205ENST00000493955 RSC1A1Q92681 617 aa7.1□□□□□ -1.27
SMC2-205ENST00000493955 RILPL2Q969X0 211 aa7.1□□□□□ -1.27
SMC2-205ENST00000493955 MNTQ99583 582 aa7.1□□□□□ -1.27
SMC2-205ENST00000493955 ZCWPW1Q9H0M4 648 aa7.1□□□□□ -1.27
SMC2-205ENST00000493955 EPS8L2Q9H6S3 715 aa7.1□□□□□ -1.27
SMC2-205ENST00000493955 SEPSECSQ9HD40 501 aaKnown RBP7.1□□□□□ -1.27
SMC2-205ENST00000493955 VPS45Q9NRW7 570 aa7.1□□□□□ -1.27
SMC2-205ENST00000493955 MAP3K20Q9NYL2 800 aaKnown RBP7.1□□□□□ -1.27
SMC2-205ENST00000493955 RNF181Q9P0P0 153 aa7.1□□□□□ -1.27
SMC2-205ENST00000493955 DNAJB11Q9UBS4 358 aa7.1□□□□□ -1.27
SMC2-205ENST00000493955 FEM1BQ9UK73 627 aa7.1□□□□□ -1.27
SMC2-205ENST00000493955 NDRG4Q9ULP0 352 aaKnown RBP7.1□□□□□ -1.27
SMC2-205ENST00000493955 B9A039 149 aa7.1□□□□□ -1.27
SMC2-205ENST00000493955 FOXS1O43638 330 aa7.1□□□□□ -1.27
SMC2-205ENST00000493955 ERN1O75460 977 aaKnown RBP7.1□□□□□ -1.27
SMC2-205ENST00000493955 CNR2P34972 360 aa7.1□□□□□ -1.27
SMC2-205ENST00000493955 NDUFV1P49821 464 aa7.1□□□□□ -1.27
SMC2-205ENST00000493955 RNASE9P60153 205 aaKnown RBP7.1□□□□□ -1.27
SMC2-205ENST00000493955 PTCHD3Q3KNS1 767 aa7.1□□□□□ -1.27
SMC2-205ENST00000493955 PREPLQ4J6C6 727 aaPredicted RBP7.1□□□□□ -1.27
SMC2-205ENST00000493955 ATPAF1Q5TC12 328 aaPredicted RBP7.1□□□□□ -1.27
SMC2-205ENST00000493955 ARHGAP40Q5TG30 622 aa7.1□□□□□ -1.27
SMC2-205ENST00000493955 SPOCD1Q6ZMY3 1216 aa7.1□□□□□ -1.27
SMC2-205ENST00000493955 SGMS1Q86VZ5 419 aa7.1□□□□□ -1.27
SMC2-205ENST00000493955 NRSN1Q8IZ57 195 aa7.1□□□□□ -1.27
SMC2-205ENST00000493955 SCAMP5Q8TAC9 235 aa7.1□□□□□ -1.27
SMC2-205ENST00000493955 ASB12Q8WXK4 309 aa7.1□□□□□ -1.27
SMC2-205ENST00000493955 DCLRE1CQ96SD1 692 aaKnown RBP7.1□□□□□ -1.27
SMC2-205ENST00000493955 GPR87Q9BY21 358 aa7.1□□□□□ -1.27
SMC2-205ENST00000493955 RIC8AQ9NPQ8 531 aa7.1□□□□□ -1.27
SMC2-205ENST00000493955 GGA3Q9NZ52 723 aa7.1□□□□□ -1.27
SMC2-205ENST00000493955 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.1□□□□□ -1.27
SMC2-205ENST00000493955 SPATA31A3Q5VYP0 1347 aa7.09□□□□□ -1.27
SMC2-205ENST00000493955 PRAMEF33A0A0G2JMD5 474 aa7.09□□□□□ -1.28
SMC2-205ENST00000493955 A0A1W2PS29 197 aa7.09□□□□□ -1.28
SMC2-205ENST00000493955 ZNF185O15231 689 aa7.09□□□□□ -1.28
SMC2-205ENST00000493955 PRAMEF10O60809 474 aa7.09□□□□□ -1.28
SMC2-205ENST00000493955 HLA-DOAP06340 250 aa7.09□□□□□ -1.28
SMC2-205ENST00000493955 POLBP06746 335 aa7.09□□□□□ -1.28
SMC2-205ENST00000493955 ANXA6P08133 673 aa7.09□□□□□ -1.28
SMC2-205ENST00000493955 CNTFP26441 200 aa7.09□□□□□ -1.28
SMC2-205ENST00000493955 PRKAA2P54646 552 aa7.09□□□□□ -1.28
SMC2-205ENST00000493955 BCAT1P54687 386 aa7.09□□□□□ -1.28
SMC2-205ENST00000493955 SCAPQ12770 1279 aa7.09□□□□□ -1.28
SMC2-205ENST00000493955 E2F2Q14209 437 aa7.09□□□□□ -1.28
SMC2-205ENST00000493955 FAM110CQ1W6H9 321 aa7.09□□□□□ -1.28
SMC2-205ENST00000493955 CERCAMQ5T4B2 595 aa7.09□□□□□ -1.28
SMC2-205ENST00000493955 SFRP4Q6FHJ7 346 aaPredicted RBP7.09□□□□□ -1.28
SMC2-205ENST00000493955 RGS7BPQ6MZT1 257 aaPredicted RBP7.09□□□□□ -1.28
SMC2-205ENST00000493955 MAATS1Q7Z4T9 603 aa7.09□□□□□ -1.28
SMC2-205ENST00000493955 TMTC1Q8IUR5 882 aa7.09□□□□□ -1.28
SMC2-205ENST00000493955 MAPKAPK5Q8IW41 473 aa7.09□□□□□ -1.28
SMC2-205ENST00000493955 SLC15A3Q8IY34 581 aa7.09□□□□□ -1.28
SMC2-205ENST00000493955 Q8NA96 180 aa7.09□□□□□ -1.28
SMC2-205ENST00000493955 SIMC1Q8NDZ2 872 aa7.09□□□□□ -1.28
SMC2-205ENST00000493955 SLC30A5Q8TAD4 765 aa7.09□□□□□ -1.28
SMC2-205ENST00000493955 ZDHHC12Q96GR4 267 aa7.09□□□□□ -1.28
SMC2-205ENST00000493955 SEC62Q99442 399 aaKnown RBP7.09□□□□□ -1.28
SMC2-205ENST00000493955 GBA2Q9HCG7 927 aaPredicted RBP7.09□□□□□ -1.28
SMC2-205ENST00000493955 EIF2B4Q9UI10 523 aaKnown RBP7.09□□□□□ -1.28
SMC2-205ENST00000493955 VPS51Q9UID3 782 aa7.09□□□□□ -1.28
SMC2-205ENST00000493955 KCNE5Q9UJ90 142 aa7.09□□□□□ -1.28
SMC2-205ENST00000493955 FBXO9Q9UK97 447 aaPredicted RBP7.09□□□□□ -1.28
SMC2-205ENST00000493955 J3KTA2 159 aa7.08□□□□□ -1.28
SMC2-205ENST00000493955 CYP27B1O15528 508 aa7.08□□□□□ -1.28
SMC2-205ENST00000493955 RHOBTB3O94955 611 aa7.08□□□□□ -1.28
SMC2-205ENST00000493955 TNFAIP3P21580 790 aa7.08□□□□□ -1.28
SMC2-205ENST00000493955 DYRK1AQ13627 763 aa7.08□□□□□ -1.28
SMC2-205ENST00000493955 HLXQ14774 488 aaPredicted RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms