RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 PPFIA2O75334 1257 aa11.25□□□□□ -0.61
PDLIM1-205ENST00000493949 NOL4O94818 638 aa11.25□□□□□ -0.61
PDLIM1-205ENST00000493949 EFEMP2O95967 443 aa11.25□□□□□ -0.61
PDLIM1-205ENST00000493949 SOD2P04179 222 aa11.25□□□□□ -0.61
PDLIM1-205ENST00000493949 RPL13P26373 211 aaKnown RBP11.25□□□□□ -0.61
PDLIM1-205ENST00000493949 MATR3P43243 847 aaKnown RBP eCLIP11.25□□□□□ -0.61
PDLIM1-205ENST00000493949 PHKA2P46019 1235 aa11.25□□□□□ -0.61
PDLIM1-205ENST00000493949 ZNF844Q08AG5 666 aa11.25□□□□□ -0.61
PDLIM1-205ENST00000493949 MTAPQ13126 283 aa11.25□□□□□ -0.61
PDLIM1-205ENST00000493949 HLTFQ14527 1009 aaKnown RBP eCLIP11.25□□□□□ -0.61
PDLIM1-205ENST00000493949 TCEAL1Q15170 157 aa11.25□□□□□ -0.61
PDLIM1-205ENST00000493949 NOMO2Q5JPE7 1267 aa11.25□□□□□ -0.61
PDLIM1-205ENST00000493949 FBXW10Q5XX13 1052 aa11.25□□□□□ -0.61
PDLIM1-205ENST00000493949 CCDC60Q8IWA6 550 aaPredicted RBP11.25□□□□□ -0.61
PDLIM1-205ENST00000493949 RNF168Q8IYW5 571 aaPredicted RBP11.25□□□□□ -0.61
PDLIM1-205ENST00000493949 SNX29Q8TEQ0 813 aa11.25□□□□□ -0.61
PDLIM1-205ENST00000493949 IFT81Q8WYA0 676 aa11.25□□□□□ -0.61
PDLIM1-205ENST00000493949 DDX12PQ92771 950 aa11.25□□□□□ -0.61
PDLIM1-205ENST00000493949 TLCD1Q96CP7 247 aa11.25□□□□□ -0.61
PDLIM1-205ENST00000493949 DNAJC19Q96DA6 116 aa11.25□□□□□ -0.61
PDLIM1-205ENST00000493949 CCDC114Q96M63 670 aa11.25□□□□□ -0.61
PDLIM1-205ENST00000493949 CARD9Q9H257 536 aa11.25□□□□□ -0.61
PDLIM1-205ENST00000493949 CHRDQ9H2X0 955 aa11.25□□□□□ -0.61
PDLIM1-205ENST00000493949 PSTPIP2Q9H939 334 aa11.25□□□□□ -0.61
PDLIM1-205ENST00000493949 CHST12Q9NRB3 414 aa11.25□□□□□ -0.61
PDLIM1-205ENST00000493949 MCM8Q9UJA3 840 aa11.25□□□□□ -0.61
PDLIM1-205ENST00000493949 SALL4Q9UJQ4 1053 aa11.25□□□□□ -0.61
PDLIM1-205ENST00000493949 WASF3Q9UPY6 502 aa11.25□□□□□ -0.61
PDLIM1-205ENST00000493949 SAMM50Q9Y512 469 aa11.25□□□□□ -0.61
PDLIM1-205ENST00000493949 LAMA5O15230 3695 aa11.24□□□□□ -0.61
PDLIM1-205ENST00000493949 COL4A2P08572 1712 aa11.24□□□□□ -0.61
PDLIM1-205ENST00000493949 TAF4O00268 1085 aa11.24□□□□□ -0.61
PDLIM1-205ENST00000493949 PDXKO00764 312 aa11.24□□□□□ -0.61
PDLIM1-205ENST00000493949 TBX3O15119 743 aa11.24□□□□□ -0.61
PDLIM1-205ENST00000493949 MAGEB2O15479 319 aa11.24□□□□□ -0.61
PDLIM1-205ENST00000493949 CALUO43852 315 aaPredicted RBP11.24□□□□□ -0.61
PDLIM1-205ENST00000493949 B4GALT3O60512 393 aa11.24□□□□□ -0.61
PDLIM1-205ENST00000493949 CSDE1O75534 798 aaKnown RBP11.24□□□□□ -0.61
PDLIM1-205ENST00000493949 SSBP05455 408 aaKnown RBP eCLIP11.24□□□□□ -0.61
PDLIM1-205ENST00000493949 H2AFZP0C0S5 128 aa11.24□□□□□ -0.61
PDLIM1-205ENST00000493949 DARSP14868 501 aaKnown RBP11.24□□□□□ -0.61
PDLIM1-205ENST00000493949 CD72P21854 359 aa11.24□□□□□ -0.61
PDLIM1-205ENST00000493949 CALRP27797 417 aaKnown RBP11.24□□□□□ -0.61
PDLIM1-205ENST00000493949 ECHS1P30084 290 aa11.24□□□□□ -0.61
PDLIM1-205ENST00000493949 CXCR5P32302 372 aa11.24□□□□□ -0.61
PDLIM1-205ENST00000493949 ATP1A2P50993 1020 aa11.24□□□□□ -0.61
PDLIM1-205ENST00000493949 CLCN3P51790 818 aa11.24□□□□□ -0.61
PDLIM1-205ENST00000493949 SLC8A3P57103 927 aa11.24□□□□□ -0.61
PDLIM1-205ENST00000493949 POLR2FP61218 127 aaKnown RBP11.24□□□□□ -0.61
PDLIM1-205ENST00000493949 GUCY1A3Q02108 690 aa11.24□□□□□ -0.61
PDLIM1-205ENST00000493949 ADCY1Q08828 1119 aa11.24□□□□□ -0.61
PDLIM1-205ENST00000493949 RAPGEF1Q13905 1077 aa11.24□□□□□ -0.61
PDLIM1-205ENST00000493949 PPP2R5DQ14738 602 aa11.24□□□□□ -0.61
PDLIM1-205ENST00000493949 CRYMQ14894 314 aa11.24□□□□□ -0.61
PDLIM1-205ENST00000493949 BMT2Q1RMZ1 405 aa11.24□□□□□ -0.61
PDLIM1-205ENST00000493949 ANKRD20A8PQ5CZ79 823 aa11.24□□□□□ -0.61
PDLIM1-205ENST00000493949 RNF187Q5TA31 235 aaPredicted RBP11.24□□□□□ -0.61
PDLIM1-205ENST00000493949 FAM160B1Q5W0V3 765 aa11.24□□□□□ -0.61
PDLIM1-205ENST00000493949 GLB1LQ6UWU2 654 aa11.24□□□□□ -0.61
PDLIM1-205ENST00000493949 H2AFVQ71UI9 128 aa11.24□□□□□ -0.61
PDLIM1-205ENST00000493949 TMC3Q7Z5M5 1100 aa11.24□□□□□ -0.61
PDLIM1-205ENST00000493949 PARP9Q8IXQ6 854 aa11.24□□□□□ -0.61
PDLIM1-205ENST00000493949 SLFN12Q8IYM2 578 aa11.24□□□□□ -0.61
PDLIM1-205ENST00000493949 METTL13Q8N6R0 699 aa11.24□□□□□ -0.61
PDLIM1-205ENST00000493949 MXRA8Q9BRK3 442 aa11.24□□□□□ -0.61
PDLIM1-205ENST00000493949 PIDD1Q9HB75 910 aa11.24□□□□□ -0.61
PDLIM1-205ENST00000493949 AGO4Q9HCK5 861 aaKnown RBP11.24□□□□□ -0.61
PDLIM1-205ENST00000493949 SLC40A1Q9NP59 571 aa11.24□□□□□ -0.61
PDLIM1-205ENST00000493949 PANK4Q9NVE7 773 aa11.24□□□□□ -0.61
PDLIM1-205ENST00000493949 CDH7Q9ULB5 785 aa11.24□□□□□ -0.61
PDLIM1-205ENST00000493949 TDRD15B5MCY1 1934 aaKnown RBP11.24□□□□□ -0.61
PDLIM1-205ENST00000493949 ADAMTS20P59510 1910 aa11.24□□□□□ -0.61
PDLIM1-205ENST00000493949 MEIS3P2A8K0S8 358 aa11.23□□□□□ -0.61
PDLIM1-205ENST00000493949 MIF4GDA9UHW6 222 aaKnown RBP11.23□□□□□ -0.61
PDLIM1-205ENST00000493949 KCNK3O14649 394 aa11.23□□□□□ -0.61
PDLIM1-205ENST00000493949 ADAMTS3O15072 1205 aa11.23□□□□□ -0.61
PDLIM1-205ENST00000493949 BUB1O43683 1085 aa11.23□□□□□ -0.61
PDLIM1-205ENST00000493949 ZNF623O75123 536 aa11.23□□□□□ -0.61
PDLIM1-205ENST00000493949 KCNK5O95279 499 aa11.23□□□□□ -0.61
PDLIM1-205ENST00000493949 AFPP02771 609 aaKnown RBP11.23□□□□□ -0.61
PDLIM1-205ENST00000493949 URODP06132 367 aa11.23□□□□□ -0.61
PDLIM1-205ENST00000493949 FAM153BP0C7A2 387 aa11.23□□□□□ -0.61
PDLIM1-205ENST00000493949 SKIP12755 728 aa11.23□□□□□ -0.61
PDLIM1-205ENST00000493949 ELF1P32519 619 aa11.23□□□□□ -0.61
PDLIM1-205ENST00000493949 CNR2P34972 360 aa11.23□□□□□ -0.61
PDLIM1-205ENST00000493949 PTENP60484 403 aa11.23□□□□□ -0.61
PDLIM1-205ENST00000493949 RNASELQ05823 741 aaKnown RBP11.23□□□□□ -0.61
PDLIM1-205ENST00000493949 RING1Q06587 406 aa11.23□□□□□ -0.61
PDLIM1-205ENST00000493949 ADCY2Q08462 1091 aa11.23□□□□□ -0.61
PDLIM1-205ENST00000493949 FAM153CQ494X1 144 aa11.23□□□□□ -0.61
PDLIM1-205ENST00000493949 CYB5D1Q6P9G0 228 aa11.23□□□□□ -0.61
PDLIM1-205ENST00000493949 LILRA6Q6PI73 481 aa11.23□□□□□ -0.61
PDLIM1-205ENST00000493949 ZNF852Q6ZMS4 543 aa11.23□□□□□ -0.61
PDLIM1-205ENST00000493949 PRR23BQ6ZRT6 265 aa11.23□□□□□ -0.61
PDLIM1-205ENST00000493949 TPRG1Q6ZUI0 275 aa11.23□□□□□ -0.61
PDLIM1-205ENST00000493949 PEX26Q7Z412 305 aa11.23□□□□□ -0.61
PDLIM1-205ENST00000493949 ZNF280BQ86YH2 543 aa11.23□□□□□ -0.61
PDLIM1-205ENST00000493949 SH2D3CQ8N5H7 860 aa11.23□□□□□ -0.61
PDLIM1-205ENST00000493949 CCDC197Q8NCU1 140 aa11.23□□□□□ -0.61
PDLIM1-205ENST00000493949 CFAP61Q8NHU2 1237 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms