RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 ZNF667Q5HYK9 610 aa13.44□□□□□ -0.26
HSPG2-212ENST00000493940 ANKRD40Q6AI12 368 aa13.44□□□□□ -0.26
HSPG2-212ENST00000493940 VSTM1Q6UX27 236 aa13.44□□□□□ -0.26
HSPG2-212ENST00000493940 C4orf50Q6ZRC1 276 aa13.44□□□□□ -0.26
HSPG2-212ENST00000493940 ACOT1Q86TX2 421 aa13.44□□□□□ -0.26
HSPG2-212ENST00000493940 ARL14EPQ8N8R7 260 aaPredicted RBP13.44□□□□□ -0.26
HSPG2-212ENST00000493940 C12orf29Q8N999 325 aa13.44□□□□□ -0.26
HSPG2-212ENST00000493940 ZMIZ2Q8NF64 920 aa13.44□□□□□ -0.26
HSPG2-212ENST00000493940 WHAMMQ8TF30 809 aa13.44□□□□□ -0.26
HSPG2-212ENST00000493940 E2F7Q96AV8 911 aa13.44□□□□□ -0.26
HSPG2-212ENST00000493940 BCO2Q9BYV7 579 aa13.44□□□□□ -0.26
HSPG2-212ENST00000493940 RNF38Q9H0F5 515 aa13.44□□□□□ -0.26
HSPG2-212ENST00000493940 MMRN2Q9H8L6 949 aa13.44□□□□□ -0.26
HSPG2-212ENST00000493940 LMAN1LQ9HAT1 526 aa13.44□□□□□ -0.26
HSPG2-212ENST00000493940 FBRSL1Q9HCM7 1045 aaKnown RBP13.44□□□□□ -0.26
HSPG2-212ENST00000493940 TDP1Q9NUW8 608 aa13.44□□□□□ -0.26
HSPG2-212ENST00000493940 OBP2AQ9NY56 170 aa13.44□□□□□ -0.26
HSPG2-212ENST00000493940 ANTXRLA6NF34 631 aa13.43□□□□□ -0.26
HSPG2-212ENST00000493940 SPECC1L-ADORA2AF8WAN1 911 aa13.43□□□□□ -0.26
HSPG2-212ENST00000493940 DPYSL4O14531 572 aa13.43□□□□□ -0.26
HSPG2-212ENST00000493940 TNFRSF10BO14763 440 aa13.43□□□□□ -0.26
HSPG2-212ENST00000493940 IKBKBO14920 756 aa13.43□□□□□ -0.26
HSPG2-212ENST00000493940 MAPK13O15264 365 aa13.43□□□□□ -0.26
HSPG2-212ENST00000493940 NDST1P52848 882 aa13.43□□□□□ -0.26
HSPG2-212ENST00000493940 FAM160A1Q05DH4 1040 aa13.43□□□□□ -0.26
HSPG2-212ENST00000493940 SGSM1Q2NKQ1 1148 aa13.43□□□□□ -0.26
HSPG2-212ENST00000493940 Q6ZS52 159 aa13.43□□□□□ -0.26
HSPG2-212ENST00000493940 YAF2Q8IY57 180 aa13.43□□□□□ -0.26
HSPG2-212ENST00000493940 FAM186BQ8IYM0 893 aa13.43□□□□□ -0.26
HSPG2-212ENST00000493940 FUKQ8N0W3 1084 aa13.43□□□□□ -0.26
HSPG2-212ENST00000493940 CELF5Q8N6W0 485 aaKnown RBP13.43□□□□□ -0.26
HSPG2-212ENST00000493940 SCAMP5Q8TAC9 235 aa13.43□□□□□ -0.26
HSPG2-212ENST00000493940 MRPS31Q92665 395 aaKnown RBP13.43□□□□□ -0.26
HSPG2-212ENST00000493940 C8orf48Q96LL4 319 aa13.43□□□□□ -0.26
HSPG2-212ENST00000493940 TTLL2Q9BWV7 592 aa13.43□□□□□ -0.26
HSPG2-212ENST00000493940 LINC00597Q9H2U6 94 aa13.43□□□□□ -0.26
HSPG2-212ENST00000493940 EBF3Q9H4W6 596 aa13.43□□□□□ -0.26
HSPG2-212ENST00000493940 TRPC7Q9HCX4 862 aa13.43□□□□□ -0.26
HSPG2-212ENST00000493940 POLR3BQ9NW08 1133 aaPredicted RBP13.43□□□□□ -0.26
HSPG2-212ENST00000493940 SPATA6Q9NWH7 488 aaPredicted RBP13.43□□□□□ -0.26
HSPG2-212ENST00000493940 FRMD4BQ9Y2L6 1034 aa13.43□□□□□ -0.26
HSPG2-212ENST00000493940 DNAH14Q0VDD8 3507 aa13.42□□□□□ -0.26
HSPG2-212ENST00000493940 TDGF1P13385 188 aa13.42□□□□□ -0.26
HSPG2-212ENST00000493940 CCDC130P13994 396 aa13.42□□□□□ -0.26
HSPG2-212ENST00000493940 CTHP32929 405 aa13.42□□□□□ -0.26
HSPG2-212ENST00000493940 RPS9P46781 194 aaKnown RBP13.42□□□□□ -0.26
HSPG2-212ENST00000493940 AP3M2P53677 418 aa13.42□□□□□ -0.26
HSPG2-212ENST00000493940 PON2Q15165 354 aa13.42□□□□□ -0.26
HSPG2-212ENST00000493940 ZNF77Q15935 545 aa13.42□□□□□ -0.26
HSPG2-212ENST00000493940 ARHGAP29Q52LW3 1261 aa13.42□□□□□ -0.26
HSPG2-212ENST00000493940 ZNF658Q5TYW1 1059 aaPredicted RBP13.42□□□□□ -0.26
HSPG2-212ENST00000493940 PKN3Q6P5Z2 889 aa13.42□□□□□ -0.26
HSPG2-212ENST00000493940 DENND5BQ6ZUT9 1274 aa13.42□□□□□ -0.26
HSPG2-212ENST00000493940 ZC3H3Q8IXZ2 948 aaKnown RBP13.42□□□□□ -0.26
HSPG2-212ENST00000493940 CSGALNACT1Q8TDX6 532 aa13.42□□□□□ -0.26
HSPG2-212ENST00000493940 TATDN2Q93075 761 aa13.42□□□□□ -0.26
HSPG2-212ENST00000493940 GCNAQ96QF7 691 aa13.42□□□□□ -0.26
HSPG2-212ENST00000493940 NELL2Q99435 816 aa13.42□□□□□ -0.26
HSPG2-212ENST00000493940 SMOQ99835 787 aa13.42□□□□□ -0.26
HSPG2-212ENST00000493940 SEMA4AQ9H3S1 761 aa13.42□□□□□ -0.26
HSPG2-212ENST00000493940 ZNF840PA6NDX5 716 aa13.41□□□□□ -0.26
HSPG2-212ENST00000493940 MAN2B1O00754 1011 aa13.41□□□□□ -0.26
HSPG2-212ENST00000493940 SCAMP3O14828 347 aaKnown RBP13.41□□□□□ -0.26
HSPG2-212ENST00000493940 PSMC2P35998 433 aaKnown RBP13.41□□□□□ -0.26
HSPG2-212ENST00000493940 AVPR1AP37288 418 aa13.41□□□□□ -0.26
HSPG2-212ENST00000493940 PIK3CAP42336 1068 aa13.41□□□□□ -0.26
HSPG2-212ENST00000493940 KPNA1P52294 538 aaPredicted RBP13.41□□□□□ -0.26
HSPG2-212ENST00000493940 MLLT6P55198 1093 aaPredicted RBP13.41□□□□□ -0.26
HSPG2-212ENST00000493940 NOP14P78316 857 aaKnown RBP13.41□□□□□ -0.26
HSPG2-212ENST00000493940 CSTF1Q05048 431 aaKnown RBP13.41□□□□□ -0.26
HSPG2-212ENST00000493940 DMWDQ09019 674 aa13.41□□□□□ -0.26
HSPG2-212ENST00000493940 TAF10Q12962 218 aa13.41□□□□□ -0.26
HSPG2-212ENST00000493940 MAPRE1Q15691 268 aaKnown RBP13.41□□□□□ -0.26
HSPG2-212ENST00000493940 COBLL1Q53SF7 1204 aa13.41□□□□□ -0.26
HSPG2-212ENST00000493940 FAM35AQ86V20 835 aa13.41□□□□□ -0.26
HSPG2-212ENST00000493940 CRYBG2Q8N1P7 616 aa13.41□□□□□ -0.26
HSPG2-212ENST00000493940 TTC16Q8NEE8 873 aa13.41□□□□□ -0.26
HSPG2-212ENST00000493940 EZH1Q92800 747 aaPredicted RBP13.41□□□□□ -0.26
HSPG2-212ENST00000493940 NELL1Q92832 810 aa13.41□□□□□ -0.26
HSPG2-212ENST00000493940 WBP2Q969T9 261 aa13.41□□□□□ -0.26
HSPG2-212ENST00000493940 CCDC47Q96A33 483 aaKnown RBP13.41□□□□□ -0.26
HSPG2-212ENST00000493940 TIGD1Q96MW7 591 aa13.41□□□□□ -0.26
HSPG2-212ENST00000493940 GSDMAQ96QA5 445 aa13.41□□□□□ -0.26
HSPG2-212ENST00000493940 DUSP9Q99956 384 aaKnown RBP13.41□□□□□ -0.26
HSPG2-212ENST00000493940 ELOVL4Q9GZR5 314 aa13.41□□□□□ -0.26
HSPG2-212ENST00000493940 CHRDQ9H2X0 955 aa13.41□□□□□ -0.26
HSPG2-212ENST00000493940 UXTQ9UBK9 157 aaPredicted RBP13.41□□□□□ -0.26
HSPG2-212ENST00000493940 CHORDC1Q9UHD1 332 aaPredicted RBP13.41□□□□□ -0.26
HSPG2-212ENST00000493940 MAN1B1Q9UKM7 699 aa13.41□□□□□ -0.26
HSPG2-212ENST00000493940 WNT6Q9Y6F9 365 aa13.41□□□□□ -0.26
HSPG2-212ENST00000493940 HHLA1C9JL84 531 aa13.4□□□□□ -0.26
HSPG2-212ENST00000493940 HDCP19113 662 aa13.4□□□□□ -0.26
HSPG2-212ENST00000493940 DDX6P26196 483 aaKnown RBP eCLIP13.4□□□□□ -0.26
HSPG2-212ENST00000493940 SATB1Q01826 763 aa13.4□□□□□ -0.26
HSPG2-212ENST00000493940 IFRD2Q12894 506 aaPredicted RBP13.4□□□□□ -0.26
HSPG2-212ENST00000493940 USP4Q13107 963 aa13.4□□□□□ -0.26
HSPG2-212ENST00000493940 RUNX3Q13761 415 aa13.4□□□□□ -0.26
HSPG2-212ENST00000493940 CCINQ13939 588 aa13.4□□□□□ -0.26
HSPG2-212ENST00000493940 ZNF268Q14587 947 aaPredicted RBP13.4□□□□□ -0.26
HSPG2-212ENST00000493940 GAB4Q2WGN9 574 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms