RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 F8VZ95 297 aa8.13□□□□□ -1.11
BRCA1-221ENST00000493795 BTN3A3O00478 584 aa8.13□□□□□ -1.11
BRCA1-221ENST00000493795 NR5A2O00482 541 aa8.13□□□□□ -1.11
BRCA1-221ENST00000493795 OR6A2O95222 327 aa8.13□□□□□ -1.11
BRCA1-221ENST00000493795 S100GP29377 79 aa8.13□□□□□ -1.11
BRCA1-221ENST00000493795 RCVRNP35243 200 aa8.13□□□□□ -1.11
BRCA1-221ENST00000493795 CASP4P49662 377 aa8.13□□□□□ -1.11
BRCA1-221ENST00000493795 STARP49675 285 aa8.13□□□□□ -1.11
BRCA1-221ENST00000493795 C21orf59P57076 290 aa8.13□□□□□ -1.11
BRCA1-221ENST00000493795 PLA2G4FQ68DD2 849 aa8.13□□□□□ -1.11
BRCA1-221ENST00000493795 EEF1AKMT1Q8WVE0 214 aa8.13□□□□□ -1.11
BRCA1-221ENST00000493795 PPP1R10Q96QC0 940 aaKnown RBP8.13□□□□□ -1.11
BRCA1-221ENST00000493795 RACGAP1Q9H0H5 632 aa8.13□□□□□ -1.11
BRCA1-221ENST00000493795 TLR7Q9NYK1 1049 aaKnown RBP8.13□□□□□ -1.11
BRCA1-221ENST00000493795 TPRKBQ9Y3C4 175 aa8.13□□□□□ -1.11
BRCA1-221ENST00000493795 GNG14A0A1W2PPG7 69 aa8.13□□□□□ -1.11
BRCA1-221ENST00000493795 SMIM22K7EJ46 135 aa8.13□□□□□ -1.11
BRCA1-221ENST00000493795 GUCY1B2O75343 617 aa8.13□□□□□ -1.11
BRCA1-221ENST00000493795 GH2P01242 217 aa8.13□□□□□ -1.11
BRCA1-221ENST00000493795 PHKG2P15735 406 aa8.13□□□□□ -1.11
BRCA1-221ENST00000493795 HNRNPH1P31943 449 aaKnown RBP8.13□□□□□ -1.11
BRCA1-221ENST00000493795 ITGA8P53708 1063 aa8.13□□□□□ -1.11
BRCA1-221ENST00000493795 NKX1-1Q15270 411 aaPredicted RBP8.13□□□□□ -1.11
BRCA1-221ENST00000493795 WDR72Q3MJ13 1102 aa8.13□□□□□ -1.11
BRCA1-221ENST00000493795 PGBD2Q6P3X8 592 aa8.13□□□□□ -1.11
BRCA1-221ENST00000493795 KCNV1Q6PIU1 500 aa8.13□□□□□ -1.11
BRCA1-221ENST00000493795 MTSS1LQ765P7 747 aa8.13□□□□□ -1.11
BRCA1-221ENST00000493795 IFNLR1Q8IU57 520 aaPredicted RBP8.13□□□□□ -1.11
BRCA1-221ENST00000493795 EID3Q8N140 333 aa8.13□□□□□ -1.11
BRCA1-221ENST00000493795 CCDC185Q8N715 623 aa8.13□□□□□ -1.11
BRCA1-221ENST00000493795 B3GALNT2Q8NCR0 500 aa8.13□□□□□ -1.11
BRCA1-221ENST00000493795 TRPC4APQ8TEL6 797 aa8.13□□□□□ -1.11
BRCA1-221ENST00000493795 OSCP1Q8WVF1 389 aa8.13□□□□□ -1.11
BRCA1-221ENST00000493795 MPP4Q96JB8 637 aa8.13□□□□□ -1.11
BRCA1-221ENST00000493795 TRAPPC9Q96Q05 1148 aa8.13□□□□□ -1.11
BRCA1-221ENST00000493795 STK33Q9BYT3 514 aa8.13□□□□□ -1.11
BRCA1-221ENST00000493795 RNF146Q9NTX7 359 aa8.13□□□□□ -1.11
BRCA1-221ENST00000493795 FKBP14Q9NWM8 211 aa8.13□□□□□ -1.11
BRCA1-221ENST00000493795 TAGLN3Q9UI15 199 aa8.13□□□□□ -1.11
BRCA1-221ENST00000493795 SIK3Q9Y2K2 1263 aa8.13□□□□□ -1.11
BRCA1-221ENST00000493795 DUOX2Q9NRD8 1548 aa8.13□□□□□ -1.11
BRCA1-221ENST00000493795 S100A6P06703 90 aa8.13□□□□□ -1.11
BRCA1-221ENST00000493795 GPD1P21695 349 aa8.13□□□□□ -1.11
BRCA1-221ENST00000493795 AVPR1AP37288 418 aa8.13□□□□□ -1.11
BRCA1-221ENST00000493795 IFNGR2P38484 337 aa8.13□□□□□ -1.11
BRCA1-221ENST00000493795 TMEM132DQ14C87 1099 aa8.13□□□□□ -1.11
BRCA1-221ENST00000493795 R3HDM1Q15032 1099 aaKnown RBP8.13□□□□□ -1.11
BRCA1-221ENST00000493795 PTGISQ16647 500 aa8.13□□□□□ -1.11
BRCA1-221ENST00000493795 FAM98BQ52LJ0 330 aaKnown RBP8.13□□□□□ -1.11
BRCA1-221ENST00000493795 POTEGQ6S5H5 508 aa8.13□□□□□ -1.11
BRCA1-221ENST00000493795 JAMLQ86YT9 394 aa8.13□□□□□ -1.11
BRCA1-221ENST00000493795 SYTL1Q8IYJ3 562 aa8.13□□□□□ -1.11
BRCA1-221ENST00000493795 RORBQ92753 470 aa8.13□□□□□ -1.11
BRCA1-221ENST00000493795 MS4A14Q96JA4 679 aa8.13□□□□□ -1.11
BRCA1-221ENST00000493795 ZFRQ96KR1 1074 aaKnown RBP8.13□□□□□ -1.11
BRCA1-221ENST00000493795 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.13□□□□□ -1.11
BRCA1-221ENST00000493795 PHF11Q9UIL8 331 aa8.13□□□□□ -1.11
BRCA1-221ENST00000493795 KCNH4Q9UQ05 1017 aa8.13□□□□□ -1.11
BRCA1-221ENST00000493795 RUVBL2Q9Y230 463 aaKnown RBP8.13□□□□□ -1.11
BRCA1-221ENST00000493795 BCLAF3A2AJT9 711 aaKnown RBP8.12□□□□□ -1.11
BRCA1-221ENST00000493795 ASB14A6NK59 587 aa8.12□□□□□ -1.11
BRCA1-221ENST00000493795 SLCO1B7G3V0H7 640 aa8.12□□□□□ -1.11
BRCA1-221ENST00000493795 FKBP6O75344 327 aa8.12□□□□□ -1.11
BRCA1-221ENST00000493795 CYP7B1O75881 506 aa8.12□□□□□ -1.11
BRCA1-221ENST00000493795 CD4P01730 458 aa8.12□□□□□ -1.11
BRCA1-221ENST00000493795 FAM200BP0CF97 657 aa8.12□□□□□ -1.11
BRCA1-221ENST00000493795 VAV1P15498 845 aa8.12□□□□□ -1.11
BRCA1-221ENST00000493795 DSG3P32926 999 aa8.12□□□□□ -1.11
BRCA1-221ENST00000493795 CRKLP46109 303 aaKnown RBP8.12□□□□□ -1.11
BRCA1-221ENST00000493795 SRP54P61011 504 aaKnown RBP8.12□□□□□ -1.11
BRCA1-221ENST00000493795 KCNT1Q5JUK3 1230 aa8.12□□□□□ -1.11
BRCA1-221ENST00000493795 SCARA3Q6AZY7 606 aa8.12□□□□□ -1.11
BRCA1-221ENST00000493795 CYB5D1Q6P9G0 228 aa8.12□□□□□ -1.11
BRCA1-221ENST00000493795 NECAB2Q7Z6G3 386 aa8.12□□□□□ -1.11
BRCA1-221ENST00000493795 SPATA18Q8TC71 538 aa8.12□□□□□ -1.11
BRCA1-221ENST00000493795 MNTQ99583 582 aa8.12□□□□□ -1.11
BRCA1-221ENST00000493795 PAIP1Q9H074 479 aaKnown RBP8.12□□□□□ -1.11
BRCA1-221ENST00000493795 BTBD7Q9P203 1132 aa8.12□□□□□ -1.11
BRCA1-221ENST00000493795 TRPC4Q9UBN4 977 aa8.12□□□□□ -1.11
BRCA1-221ENST00000493795 APEX2Q9UBZ4 518 aa8.12□□□□□ -1.11
BRCA1-221ENST00000493795 RABGEF1Q9UJ41 708 aa8.12□□□□□ -1.11
BRCA1-221ENST00000493795 PHTF1Q9UMS5 762 aa8.12□□□□□ -1.11
BRCA1-221ENST00000493795 CCDC189A1A4V9 331 aa8.12□□□□□ -1.11
BRCA1-221ENST00000493795 PDXKO00764 312 aa8.12□□□□□ -1.11
BRCA1-221ENST00000493795 PRR29P0C7W0 189 aa8.12□□□□□ -1.11
BRCA1-221ENST00000493795 FCER1AP12319 257 aa8.12□□□□□ -1.11
BRCA1-221ENST00000493795 PTPN1P18031 435 aaKnown RBP8.12□□□□□ -1.11
BRCA1-221ENST00000493795 TBCELQ5QJ74 424 aa8.12□□□□□ -1.11
BRCA1-221ENST00000493795 HAUS6Q7Z4H7 955 aa8.12□□□□□ -1.11
BRCA1-221ENST00000493795 CENPIQ92674 756 aaPredicted RBP8.12□□□□□ -1.11
BRCA1-221ENST00000493795 SGF29Q96ES7 293 aa8.12□□□□□ -1.11
BRCA1-221ENST00000493795 AIFM3Q96NN9 605 aa8.12□□□□□ -1.11
BRCA1-221ENST00000493795 CLCC1Q96S66 551 aa8.12□□□□□ -1.11
BRCA1-221ENST00000493795 EIF2AK1Q9BQI3 630 aaKnown RBP8.12□□□□□ -1.11
BRCA1-221ENST00000493795 OXCT2Q9BYC2 517 aaPredicted RBP8.12□□□□□ -1.11
BRCA1-221ENST00000493795 MCM8Q9UJA3 840 aa8.12□□□□□ -1.11
BRCA1-221ENST00000493795 ANAPC2Q9UJX6 822 aa8.12□□□□□ -1.11
BRCA1-221ENST00000493795 PCDHGA3Q9Y5H0 932 aa8.12□□□□□ -1.11
BRCA1-221ENST00000493795 SNX9Q9Y5X1 595 aa8.12□□□□□ -1.11
BRCA1-221ENST00000493795 PDS5AQ29RF7 1337 aaKnown RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms