RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 DNA2P51530 1060 aa10.62□□□□□ -0.71
PRPF3-206ENST00000493553 MYL6P60660 151 aa10.62□□□□□ -0.71
PRPF3-206ENST00000493553 NOMO3P69849 1222 aa10.62□□□□□ -0.71
PRPF3-206ENST00000493553 MESDQ14696 234 aa10.62□□□□□ -0.71
PRPF3-206ENST00000493553 TMEM132DQ14C87 1099 aa10.62□□□□□ -0.71
PRPF3-206ENST00000493553 SPDYCQ5MJ68 293 aa10.62□□□□□ -0.71
PRPF3-206ENST00000493553 CFAP58Q5T655 872 aa10.62□□□□□ -0.71
PRPF3-206ENST00000493553 MFSD14CQ5VZR4 134 aa10.62□□□□□ -0.71
PRPF3-206ENST00000493553 LMBRD2Q68DH5 695 aaPredicted RBP10.62□□□□□ -0.71
PRPF3-206ENST00000493553 PLEKHA7Q6IQ23 1121 aa10.62□□□□□ -0.71
PRPF3-206ENST00000493553 SLC27A1Q6PCB7 646 aa10.62□□□□□ -0.71
PRPF3-206ENST00000493553 FAM43BQ6ZT52 329 aaPredicted RBP10.62□□□□□ -0.71
PRPF3-206ENST00000493553 HFE2Q6ZVN8 426 aa10.62□□□□□ -0.71
PRPF3-206ENST00000493553 MON1BQ7L1V2 547 aa10.62□□□□□ -0.71
PRPF3-206ENST00000493553 CROCCP2Q86T23 111 aa10.62□□□□□ -0.71
PRPF3-206ENST00000493553 RSPH3Q86UC2 560 aa10.62□□□□□ -0.71
PRPF3-206ENST00000493553 PALB2Q86YC2 1186 aa10.62□□□□□ -0.71
PRPF3-206ENST00000493553 HACE1Q8IYU2 909 aa10.62□□□□□ -0.71
PRPF3-206ENST00000493553 MREGQ8N565 214 aa10.62□□□□□ -0.71
PRPF3-206ENST00000493553 OR13H1Q8NG92 308 aa10.62□□□□□ -0.71
PRPF3-206ENST00000493553 TRAPPC12Q8WVT3 735 aa10.62□□□□□ -0.71
PRPF3-206ENST00000493553 ZNF606Q8WXB4 792 aa10.62□□□□□ -0.71
PRPF3-206ENST00000493553 BCO2Q9BYV7 579 aa10.62□□□□□ -0.71
PRPF3-206ENST00000493553 UBXN6Q9BZV1 441 aa10.62□□□□□ -0.71
PRPF3-206ENST00000493553 SMG9Q9H0W8 520 aaKnown RBP10.62□□□□□ -0.71
PRPF3-206ENST00000493553 PDZD7Q9H5P4 517 aa10.62□□□□□ -0.71
PRPF3-206ENST00000493553 APOBEC3GQ9HC16 384 aaKnown RBP10.62□□□□□ -0.71
PRPF3-206ENST00000493553 GNEQ9Y223 722 aaKnown RBP10.62□□□□□ -0.71
PRPF3-206ENST00000493553 ZNFX1Q9P2E3 1918 aaKnown RBP10.62□□□□□ -0.71
PRPF3-206ENST00000493553 PTPRJQ12913 1337 aa10.61□□□□□ -0.71
PRPF3-206ENST00000493553 TNPO2O14787 897 aaKnown RBP10.61□□□□□ -0.71
PRPF3-206ENST00000493553 TSPAN1O60635 241 aa10.61□□□□□ -0.71
PRPF3-206ENST00000493553 HSF2BPO75031 334 aa10.61□□□□□ -0.71
PRPF3-206ENST00000493553 SEC31AO94979 1220 aaKnown RBP10.61□□□□□ -0.71
PRPF3-206ENST00000493553 CD4P01730 458 aa10.61□□□□□ -0.71
PRPF3-206ENST00000493553 TFRCP02786 760 aaKnown RBP10.61□□□□□ -0.71
PRPF3-206ENST00000493553 WEE2P0C1S8 567 aa10.61□□□□□ -0.71
PRPF3-206ENST00000493553 SMIM10L2AP0DMW4 78 aa10.61□□□□□ -0.71
PRPF3-206ENST00000493553 SMIM10L2BP0DMW5 78 aa10.61□□□□□ -0.71
PRPF3-206ENST00000493553 AKR1A1P14550 325 aa10.61□□□□□ -0.71
PRPF3-206ENST00000493553 ARF4P18085 180 aaPredicted RBP10.61□□□□□ -0.71
PRPF3-206ENST00000493553 COMTP21964 271 aa10.61□□□□□ -0.71
PRPF3-206ENST00000493553 MMP8P22894 467 aa10.61□□□□□ -0.71
PRPF3-206ENST00000493553 PNPLA4P41247 253 aa10.61□□□□□ -0.71
PRPF3-206ENST00000493553 TNFSF9P41273 254 aa10.61□□□□□ -0.71
PRPF3-206ENST00000493553 GATA4P43694 442 aa10.61□□□□□ -0.71
PRPF3-206ENST00000493553 PEX5P50542 639 aa10.61□□□□□ -0.71
PRPF3-206ENST00000493553 CBX1P83916 185 aa10.61□□□□□ -0.71
PRPF3-206ENST00000493553 LMNB2Q03252 620 aa10.61□□□□□ -0.71
PRPF3-206ENST00000493553 PIGHQ14442 188 aaPredicted RBP10.61□□□□□ -0.71
PRPF3-206ENST00000493553 ZBTB41Q5SVQ8 909 aa10.61□□□□□ -0.71
PRPF3-206ENST00000493553 NAA35Q5VZE5 725 aa10.61□□□□□ -0.71
PRPF3-206ENST00000493553 CST9Q5W186 159 aa10.61□□□□□ -0.71
PRPF3-206ENST00000493553 EEF1DP3Q658K8 133 aa10.61□□□□□ -0.71
PRPF3-206ENST00000493553 CEP128Q6ZU80 1094 aa10.61□□□□□ -0.71
PRPF3-206ENST00000493553 CATSPER4Q7RTX7 472 aa10.61□□□□□ -0.71
PRPF3-206ENST00000493553 SAPCD2Q86UD0 394 aa10.61□□□□□ -0.71
PRPF3-206ENST00000493553 TLK2Q86UE8 772 aa10.61□□□□□ -0.71
PRPF3-206ENST00000493553 RHOT1Q8IXI2 618 aa10.61□□□□□ -0.71
PRPF3-206ENST00000493553 DMRTC2Q8IXT2 367 aaPredicted RBP10.61□□□□□ -0.71
PRPF3-206ENST00000493553 DTWD1Q8N5C7 304 aa10.61□□□□□ -0.71
PRPF3-206ENST00000493553 LRRC52Q8N7C0 313 aa10.61□□□□□ -0.71
PRPF3-206ENST00000493553 BEST2Q8NFU1 509 aa10.61□□□□□ -0.71
PRPF3-206ENST00000493553 NPLOC4Q8TAT6 608 aa10.61□□□□□ -0.71
PRPF3-206ENST00000493553 CD101Q93033 1021 aa10.61□□□□□ -0.71
PRPF3-206ENST00000493553 MS4A14Q96JA4 679 aa10.61□□□□□ -0.71
PRPF3-206ENST00000493553 NSUN5Q96P11 429 aaKnown RBP10.61□□□□□ -0.71
PRPF3-206ENST00000493553 XYLT2Q9H1B5 865 aa10.61□□□□□ -0.71
PRPF3-206ENST00000493553 EPC1Q9H2F5 836 aa10.61□□□□□ -0.71
PRPF3-206ENST00000493553 CPA4Q9UI42 421 aa10.61□□□□□ -0.71
PRPF3-206ENST00000493553 ANAPC7Q9UJX3 599 aa10.61□□□□□ -0.71
PRPF3-206ENST00000493553 PACSIN2Q9UNF0 486 aaPredicted RBP10.61□□□□□ -0.71
PRPF3-206ENST00000493553 COG5Q9UP83 839 aa10.61□□□□□ -0.71
PRPF3-206ENST00000493553 USTQ9Y2C2 406 aa10.61□□□□□ -0.71
PRPF3-206ENST00000493553 DOCK5Q9H7D0 1870 aa10.61□□□□□ -0.71
PRPF3-206ENST00000493553 PLXNB2O15031 1838 aa10.61□□□□□ -0.71
PRPF3-206ENST00000493553 GOLGA6BA6NDN3 693 aa10.6□□□□□ -0.71
PRPF3-206ENST00000493553 LACTBL1A8MY62 500 aa10.6□□□□□ -0.71
PRPF3-206ENST00000493553 M0QZ92 97 aa10.6□□□□□ -0.71
PRPF3-206ENST00000493553 HAS3O00219 553 aa10.6□□□□□ -0.71
PRPF3-206ENST00000493553 TLR3O15455 904 aaKnown RBP10.6□□□□□ -0.71
PRPF3-206ENST00000493553 B4GALT5O43286 388 aa10.6□□□□□ -0.71
PRPF3-206ENST00000493553 CA12O43570 354 aa10.6□□□□□ -0.71
PRPF3-206ENST00000493553 ADAM23O75077 832 aa10.6□□□□□ -0.71
PRPF3-206ENST00000493553 PHF2O75151 1096 aa10.6□□□□□ -0.71
PRPF3-206ENST00000493553 DUSP11O75319 330 aaKnown RBP10.6□□□□□ -0.71
PRPF3-206ENST00000493553 GHRHP01286 108 aa10.6□□□□□ -0.71
PRPF3-206ENST00000493553 HMGCRP04035 888 aa10.6□□□□□ -0.71
PRPF3-206ENST00000493553 EDN1P05305 212 aa10.6□□□□□ -0.71
PRPF3-206ENST00000493553 RPLP1P05386 114 aaKnown RBP10.6□□□□□ -0.71
PRPF3-206ENST00000493553 ZNF865P0CJ78 1059 aaPredicted RBP10.6□□□□□ -0.71
PRPF3-206ENST00000493553 CXCL8P10145 99 aa10.6□□□□□ -0.71
PRPF3-206ENST00000493553 VDRP11473 427 aa10.6□□□□□ -0.71
PRPF3-206ENST00000493553 CYP2C9P11712 490 aa10.6□□□□□ -0.71
PRPF3-206ENST00000493553 DARSP14868 501 aaKnown RBP10.6□□□□□ -0.71
PRPF3-206ENST00000493553 PAX3P23760 479 aa10.6□□□□□ -0.71
PRPF3-206ENST00000493553 FCGRTP55899 365 aa10.6□□□□□ -0.71
PRPF3-206ENST00000493553 GUCY2DQ02846 1103 aa10.6□□□□□ -0.71
PRPF3-206ENST00000493553 ACAP1Q15027 740 aa10.6□□□□□ -0.71
PRPF3-206ENST00000493553 MARCH8Q5T0T0 291 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms