RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 CDH9Q9ULB4 789 aa11.77□□□□□ -0.53
SNRNP200-207ENST00000493271 PCDHB13Q9Y5F0 798 aa11.77□□□□□ -0.53
SNRNP200-207ENST00000493271 ASPMQ8IZT6 3477 aa11.77□□□□□ -0.53
SNRNP200-207ENST00000493271 A0A0A0MRY4 1105 aa11.76□□□□□ -0.53
SNRNP200-207ENST00000493271 C2orf78A6NCI8 922 aa11.76□□□□□ -0.53
SNRNP200-207ENST00000493271 LEFTY2O00292 366 aa11.76□□□□□ -0.53
SNRNP200-207ENST00000493271 TRIM66O15016 1216 aa11.76□□□□□ -0.53
SNRNP200-207ENST00000493271 MAP3K13O43283 966 aa11.76□□□□□ -0.53
SNRNP200-207ENST00000493271 SEC24BO95487 1268 aa11.76□□□□□ -0.53
SNRNP200-207ENST00000493271 OLFM2O95897 454 aa11.76□□□□□ -0.53
SNRNP200-207ENST00000493271 ADH1CP00326 375 aa11.76□□□□□ -0.53
SNRNP200-207ENST00000493271 APODP05090 189 aa11.76□□□□□ -0.53
SNRNP200-207ENST00000493271 KRT19P08727 400 aa11.76□□□□□ -0.53
SNRNP200-207ENST00000493271 TMEM191BP0C7N4 346 aa11.76□□□□□ -0.53
SNRNP200-207ENST00000493271 ACAT1P24752 427 aaKnown RBP11.76□□□□□ -0.53
SNRNP200-207ENST00000493271 CDR1P51861 262 aa11.76□□□□□ -0.53
SNRNP200-207ENST00000493271 NOP14P78316 857 aaKnown RBP11.76□□□□□ -0.53
SNRNP200-207ENST00000493271 IRX4P78413 519 aa11.76□□□□□ -0.53
SNRNP200-207ENST00000493271 TRIM61Q5EBN2 209 aa11.76□□□□□ -0.53
SNRNP200-207ENST00000493271 PEAR1Q5VY43 1037 aaPredicted RBP11.76□□□□□ -0.53
SNRNP200-207ENST00000493271 ERICH6BQ5W0A0 696 aa11.76□□□□□ -0.53
SNRNP200-207ENST00000493271 SLC23A3Q6PIS1 610 aa11.76□□□□□ -0.53
SNRNP200-207ENST00000493271 NUDT18Q6ZVK8 323 aa11.76□□□□□ -0.53
SNRNP200-207ENST00000493271 TRMT11Q7Z4G4 463 aaKnown RBP11.76□□□□□ -0.53
SNRNP200-207ENST00000493271 SFR1Q86XK3 245 aa11.76□□□□□ -0.53
SNRNP200-207ENST00000493271 STKLD1Q8NE28 680 aa11.76□□□□□ -0.53
SNRNP200-207ENST00000493271 TTC16Q8NEE8 873 aa11.76□□□□□ -0.53
SNRNP200-207ENST00000493271 LRRC15Q8TF66 581 aa11.76□□□□□ -0.53
SNRNP200-207ENST00000493271 OTUB2Q96DC9 234 aa11.76□□□□□ -0.53
SNRNP200-207ENST00000493271 ANKRD36BP1Q96IX9 119 aa11.76□□□□□ -0.53
SNRNP200-207ENST00000493271 KIF2CQ99661 725 aa11.76□□□□□ -0.53
SNRNP200-207ENST00000493271 SCNM1Q9BWG6 230 aa11.76□□□□□ -0.53
SNRNP200-207ENST00000493271 PPP4R2Q9NY27 417 aa11.76□□□□□ -0.53
SNRNP200-207ENST00000493271 TBC1D14Q9P2M4 693 aa11.76□□□□□ -0.53
SNRNP200-207ENST00000493271 CACNA1GO43497 2377 aa11.76□□□□□ -0.53
SNRNP200-207ENST00000493271 ATRXP46100 2492 aa11.76□□□□□ -0.53
SNRNP200-207ENST00000493271 NUP205Q92621 2012 aa11.76□□□□□ -0.53
SNRNP200-207ENST00000493271 MYO16Q9Y6X6 1858 aa11.75□□□□□ -0.53
SNRNP200-207ENST00000493271 PATE3B3GLJ2 98 aa11.75□□□□□ -0.53
SNRNP200-207ENST00000493271 AP5Z1O43299 807 aa11.75□□□□□ -0.53
SNRNP200-207ENST00000493271 FAM163BP0C2L3 166 aa11.75□□□□□ -0.53
SNRNP200-207ENST00000493271 BCKDHBP21953 392 aa11.75□□□□□ -0.53
SNRNP200-207ENST00000493271 GJB2P29033 226 aa11.75□□□□□ -0.53
SNRNP200-207ENST00000493271 GRIK1P39086 918 aa11.75□□□□□ -0.53
SNRNP200-207ENST00000493271 TXLNAP40222 546 aa11.75□□□□□ -0.53
SNRNP200-207ENST00000493271 GRIA2P42262 883 aa11.75□□□□□ -0.53
SNRNP200-207ENST00000493271 TNFRSF4P43489 277 aa11.75□□□□□ -0.53
SNRNP200-207ENST00000493271 ATXN3P54252 364 aaPredicted RBP11.75□□□□□ -0.53
SNRNP200-207ENST00000493271 SEC13P55735 322 aa11.75□□□□□ -0.53
SNRNP200-207ENST00000493271 RABEP1Q15276 862 aa11.75□□□□□ -0.53
SNRNP200-207ENST00000493271 SOWAHAQ2M3V2 549 aa11.75□□□□□ -0.53
SNRNP200-207ENST00000493271 UAP1L1Q3KQV9 507 aa11.75□□□□□ -0.53
SNRNP200-207ENST00000493271 LYSMD4Q5XG99 296 aa11.75□□□□□ -0.53
SNRNP200-207ENST00000493271 SLC36A4Q6YBV0 504 aa11.75□□□□□ -0.53
SNRNP200-207ENST00000493271 LIMS2Q7Z4I7 341 aa11.75□□□□□ -0.53
SNRNP200-207ENST00000493271 ADGRG2Q8IZP9 1017 aa11.75□□□□□ -0.53
SNRNP200-207ENST00000493271 SYCP3Q8IZU3 236 aa11.75□□□□□ -0.53
SNRNP200-207ENST00000493271 DEFB124Q8NES8 71 aa11.75□□□□□ -0.53
SNRNP200-207ENST00000493271 CXorf38Q8TB03 319 aa11.75□□□□□ -0.53
SNRNP200-207ENST00000493271 ZCCHC14Q8WYQ9 949 aaKnown RBP11.75□□□□□ -0.53
SNRNP200-207ENST00000493271 MYLPFQ96A32 169 aa11.75□□□□□ -0.53
SNRNP200-207ENST00000493271 C8orf48Q96LL4 319 aa11.75□□□□□ -0.53
SNRNP200-207ENST00000493271 SLITRK1Q96PX8 696 aa11.75□□□□□ -0.53
SNRNP200-207ENST00000493271 DUSP9Q99956 384 aaKnown RBP11.75□□□□□ -0.53
SNRNP200-207ENST00000493271 SYT15Q9BQS2 421 aa11.75□□□□□ -0.53
SNRNP200-207ENST00000493271 LINC00597Q9H2U6 94 aa11.75□□□□□ -0.53
SNRNP200-207ENST00000493271 INVSQ9Y283 1065 aa11.75□□□□□ -0.53
SNRNP200-207ENST00000493271 MSRB2Q9Y3D2 182 aa11.75□□□□□ -0.53
SNRNP200-207ENST00000493271 SPEGQ15772 3267 aa11.75□□□□□ -0.53
SNRNP200-207ENST00000493271 HELZP42694 1942 aaKnown RBP11.74□□□□□ -0.53
SNRNP200-207ENST00000493271 ATG2BQ96BY7 2078 aa11.74□□□□□ -0.53
SNRNP200-207ENST00000493271 SRRM3A6NNA2 597 aaPredicted RBP11.74□□□□□ -0.53
SNRNP200-207ENST00000493271 KAT7O95251 611 aa11.74□□□□□ -0.53
SNRNP200-207ENST00000493271 GCNT3O95395 438 aa11.74□□□□□ -0.53
SNRNP200-207ENST00000493271 TNNC2P02585 160 aa11.74□□□□□ -0.53
SNRNP200-207ENST00000493271 CYP17A1P05093 508 aa11.74□□□□□ -0.53
SNRNP200-207ENST00000493271 WARSP23381 471 aaKnown RBP11.74□□□□□ -0.53
SNRNP200-207ENST00000493271 RESTQ13127 1097 aa11.74□□□□□ -0.53
SNRNP200-207ENST00000493271 SEMA3BQ13214 749 aa11.74□□□□□ -0.53
SNRNP200-207ENST00000493271 ACAP1Q15027 740 aa11.74□□□□□ -0.53
SNRNP200-207ENST00000493271 DHCR24Q15392 516 aa11.74□□□□□ -0.53
SNRNP200-207ENST00000493271 DUOXA1Q1HG43 343 aa11.74□□□□□ -0.53
SNRNP200-207ENST00000493271 GAB4Q2WGN9 574 aa11.74□□□□□ -0.53
SNRNP200-207ENST00000493271 TMEM92Q6UXU6 159 aa11.74□□□□□ -0.53
SNRNP200-207ENST00000493271 STXBP4Q6ZWJ1 553 aa11.74□□□□□ -0.53
SNRNP200-207ENST00000493271 SV2BQ7L1I2 683 aa11.74□□□□□ -0.53
SNRNP200-207ENST00000493271 DYMQ7RTS9 669 aa11.74□□□□□ -0.53
SNRNP200-207ENST00000493271 FILIP1Q7Z7B0 1213 aa11.74□□□□□ -0.53
SNRNP200-207ENST00000493271 OSTM1Q86WC4 334 aa11.74□□□□□ -0.53
SNRNP200-207ENST00000493271 GPD1LQ8N335 351 aa11.74□□□□□ -0.53
SNRNP200-207ENST00000493271 HDDC3Q8N4P3 179 aa11.74□□□□□ -0.53
SNRNP200-207ENST00000493271 CCDC33Q8N5R6 958 aa11.74□□□□□ -0.53
SNRNP200-207ENST00000493271 IL17RCQ8NAC3 791 aa11.74□□□□□ -0.53
SNRNP200-207ENST00000493271 TXNDC5Q8NBS9 432 aaKnown RBP11.74□□□□□ -0.53
SNRNP200-207ENST00000493271 PDZD8Q8NEN9 1154 aa11.74□□□□□ -0.53
SNRNP200-207ENST00000493271 OVCA2Q8WZ82 227 aa11.74□□□□□ -0.53
SNRNP200-207ENST00000493271 SAAL1Q96ER3 474 aa11.74□□□□□ -0.53
SNRNP200-207ENST00000493271 KIAA1586Q9HCI6 787 aa11.74□□□□□ -0.53
SNRNP200-207ENST00000493271 INTS13Q9NVM9 706 aa11.74□□□□□ -0.53
SNRNP200-207ENST00000493271 BCCIPQ9P287 314 aaKnown RBP eCLIP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms