RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 FGF14Q92915 247 aa13.55□□□□□ -0.24
CLIP2-209ENST00000493166 FAM81BQ96LP2 452 aa13.55□□□□□ -0.24
CLIP2-209ENST00000493166 MYRFLQ96LU7 910 aa13.55□□□□□ -0.24
CLIP2-209ENST00000493166 ZSWIM3Q96MP5 696 aa13.55□□□□□ -0.24
CLIP2-209ENST00000493166 KCNK16Q96T55 309 aa13.55□□□□□ -0.24
CLIP2-209ENST00000493166 FUCA2Q9BTY2 467 aa13.55□□□□□ -0.24
CLIP2-209ENST00000493166 VPS16Q9H269 839 aa13.55□□□□□ -0.24
CLIP2-209ENST00000493166 APEX2Q9UBZ4 518 aa13.55□□□□□ -0.24
CLIP2-209ENST00000493166 SMTNL1A8MU46 457 aa13.54□□□□□ -0.24
CLIP2-209ENST00000493166 PI4K2BG5E9Z4 385 aa13.54□□□□□ -0.24
CLIP2-209ENST00000493166 F11P03951 625 aa13.54□□□□□ -0.24
CLIP2-209ENST00000493166 KRT5P13647 590 aa13.54□□□□□ -0.24
CLIP2-209ENST00000493166 CD19P15391 556 aa13.54□□□□□ -0.24
CLIP2-209ENST00000493166 ACO1P21399 889 aaKnown RBP13.54□□□□□ -0.24
CLIP2-209ENST00000493166 ZNF165P49910 485 aa13.54□□□□□ -0.24
CLIP2-209ENST00000493166 MFAP3P55082 362 aa13.54□□□□□ -0.24
CLIP2-209ENST00000493166 USP46P62068 366 aa13.54□□□□□ -0.24
CLIP2-209ENST00000493166 NCAPHQ15003 741 aa13.54□□□□□ -0.24
CLIP2-209ENST00000493166 ZSCAN23Q3MJ62 389 aa13.54□□□□□ -0.24
CLIP2-209ENST00000493166 SGO2Q562F6 1265 aa13.54□□□□□ -0.24
CLIP2-209ENST00000493166 FAM78AQ5JUQ0 283 aa13.54□□□□□ -0.24
CLIP2-209ENST00000493166 POTEHQ6S545 545 aa13.54□□□□□ -0.24
CLIP2-209ENST00000493166 ENOSF1Q7L5Y1 443 aa13.54□□□□□ -0.24
CLIP2-209ENST00000493166 UBALD2Q8IYN6 164 aa13.54□□□□□ -0.24
CLIP2-209ENST00000493166 NUP93Q8N1F7 819 aa13.54□□□□□ -0.24
CLIP2-209ENST00000493166 ZSCAN18Q8TBC5 510 aaPredicted RBP13.54□□□□□ -0.24
CLIP2-209ENST00000493166 MRPS31Q92665 395 aaKnown RBP13.54□□□□□ -0.24
CLIP2-209ENST00000493166 JAKMIP2Q96AA8 810 aa13.54□□□□□ -0.24
CLIP2-209ENST00000493166 KREMEN1Q96MU8 473 aa13.54□□□□□ -0.24
CLIP2-209ENST00000493166 ASB16Q96NS5 453 aa13.54□□□□□ -0.24
CLIP2-209ENST00000493166 SMOQ99835 787 aa13.54□□□□□ -0.24
CLIP2-209ENST00000493166 KXD1Q9BQD3 176 aa13.54□□□□□ -0.24
CLIP2-209ENST00000493166 TTLL2Q9BWV7 592 aa13.54□□□□□ -0.24
CLIP2-209ENST00000493166 CSNK1G1Q9HCP0 422 aa13.54□□□□□ -0.24
CLIP2-209ENST00000493166 TADA3O75528 432 aa13.53□□□□□ -0.24
CLIP2-209ENST00000493166 BEST1O76090 585 aa13.53□□□□□ -0.24
CLIP2-209ENST00000493166 RTN3O95197 1032 aaPredicted RBP13.53□□□□□ -0.24
CLIP2-209ENST00000493166 PAEPP09466 180 aa13.53□□□□□ -0.24
CLIP2-209ENST00000493166 VDRP11473 427 aa13.53□□□□□ -0.24
CLIP2-209ENST00000493166 ZNF18P17022 549 aa13.53□□□□□ -0.24
CLIP2-209ENST00000493166 NPR3P17342 541 aa13.53□□□□□ -0.24
CLIP2-209ENST00000493166 DDX6P26196 483 aaKnown RBP eCLIP13.53□□□□□ -0.24
CLIP2-209ENST00000493166 SLC5A3P53794 718 aa13.53□□□□□ -0.24
CLIP2-209ENST00000493166 ZXDAP98168 799 aa13.53□□□□□ -0.24
CLIP2-209ENST00000493166 APBA1Q02410 837 aa13.53□□□□□ -0.24
CLIP2-209ENST00000493166 NFKBIBQ15653 356 aa13.53□□□□□ -0.24
CLIP2-209ENST00000493166 ARHGAP44Q17R89 818 aa13.53□□□□□ -0.24
CLIP2-209ENST00000493166 ARHGAP17Q68EM7 881 aa13.53□□□□□ -0.24
CLIP2-209ENST00000493166 GJB7Q6PEY0 223 aa13.53□□□□□ -0.24
CLIP2-209ENST00000493166 CLEC20AQ6ZU45 233 aa13.53□□□□□ -0.24
CLIP2-209ENST00000493166 TMEM150AQ86TG1 271 aa13.53□□□□□ -0.24
CLIP2-209ENST00000493166 DHX40Q8IX18 779 aaKnown RBP13.53□□□□□ -0.24
CLIP2-209ENST00000493166 RBBP8NLQ8NC74 664 aaPredicted RBP13.53□□□□□ -0.24
CLIP2-209ENST00000493166 ZMIZ2Q8NF64 920 aa13.53□□□□□ -0.24
CLIP2-209ENST00000493166 EDAQ92838 391 aa13.53□□□□□ -0.24
CLIP2-209ENST00000493166 SMARCD2Q92925 531 aa13.53□□□□□ -0.24
CLIP2-209ENST00000493166 ELSPBP1Q96BH3 223 aa13.53□□□□□ -0.24
CLIP2-209ENST00000493166 SLITRK1Q96PX8 696 aa13.53□□□□□ -0.24
CLIP2-209ENST00000493166 DUSP16Q9BY84 665 aa13.53□□□□□ -0.24
CLIP2-209ENST00000493166 SMOC2Q9H3U7 446 aa13.53□□□□□ -0.24
CLIP2-209ENST00000493166 EPHX3Q9H6B9 360 aa13.53□□□□□ -0.24
CLIP2-209ENST00000493166 TASP1Q9H6P5 420 aa13.53□□□□□ -0.24
CLIP2-209ENST00000493166 ZFP14Q9HCL3 533 aa13.53□□□□□ -0.24
CLIP2-209ENST00000493166 ZMYM5Q9UJ78 669 aa13.53□□□□□ -0.24
CLIP2-209ENST00000493166 KIAA1257Q9ULG3 409 aa13.53□□□□□ -0.24
CLIP2-209ENST00000493166 DUSP12Q9UNI6 340 aa13.53□□□□□ -0.24
CLIP2-209ENST00000493166 BECN2A8MW95 431 aa13.52□□□□□ -0.25
CLIP2-209ENST00000493166 TNFRSF10BO14763 440 aa13.52□□□□□ -0.25
CLIP2-209ENST00000493166 ECI2O75521 394 aa13.52□□□□□ -0.25
CLIP2-209ENST00000493166 FCARP24071 287 aa13.52□□□□□ -0.25
CLIP2-209ENST00000493166 YWHAQP27348 245 aa13.52□□□□□ -0.25
CLIP2-209ENST00000493166 COPB1P53618 953 aaKnown RBP13.52□□□□□ -0.25
CLIP2-209ENST00000493166 SLC8A3P57103 927 aa13.52□□□□□ -0.25
CLIP2-209ENST00000493166 TAF10Q12962 218 aa13.52□□□□□ -0.25
CLIP2-209ENST00000493166 GOLGA7BQ2TAP0 167 aa13.52□□□□□ -0.25
CLIP2-209ENST00000493166 FKBP15Q5T1M5 1219 aa13.52□□□□□ -0.25
CLIP2-209ENST00000493166 TANGO2Q6ICL3 276 aa13.52□□□□□ -0.25
CLIP2-209ENST00000493166 SLC44A3Q8N4M1 653 aa13.52□□□□□ -0.25
CLIP2-209ENST00000493166 MAB21L3Q8N8X9 362 aa13.52□□□□□ -0.25
CLIP2-209ENST00000493166 SCAMP5Q8TAC9 235 aa13.52□□□□□ -0.25
CLIP2-209ENST00000493166 FBXO32Q969P5 355 aa13.52□□□□□ -0.25
CLIP2-209ENST00000493166 RPP25Q9BUL9 199 aaKnown RBP13.52□□□□□ -0.25
CLIP2-209ENST00000493166 HSD3B7Q9H2F3 369 aa13.52□□□□□ -0.25
CLIP2-209ENST00000493166 TRPC7Q9HCX4 862 aa13.52□□□□□ -0.25
CLIP2-209ENST00000493166 PNPLA8Q9NP80 782 aa13.52□□□□□ -0.25
CLIP2-209ENST00000493166 SIX2Q9NPC8 291 aa13.52□□□□□ -0.25
CLIP2-209ENST00000493166 TRPM5Q9NZQ8 1165 aa13.52□□□□□ -0.25
CLIP2-209ENST00000493166 HESX1Q9UBX0 185 aa13.52□□□□□ -0.25
CLIP2-209ENST00000493166 LIMA1Q9UHB6 759 aaKnown RBP13.52□□□□□ -0.25
CLIP2-209ENST00000493166 TSPAN16Q9UKR8 245 aa13.52□□□□□ -0.25
CLIP2-209ENST00000493166 TECTAO75443 2155 aa13.51□□□□□ -0.25
CLIP2-209ENST00000493166 COL4A2P08572 1712 aa13.51□□□□□ -0.25
CLIP2-209ENST00000493166 TRAV19A0A0A6YYK7 116 aa13.51□□□□□ -0.25
CLIP2-209ENST00000493166 RNF225M0QZC1 329 aaPredicted RBP13.51□□□□□ -0.25
CLIP2-209ENST00000493166 ABL1P00519 1130 aa13.51□□□□□ -0.25
CLIP2-209ENST00000493166 SRFP11831 508 aa13.51□□□□□ -0.25
CLIP2-209ENST00000493166 AVPR1AP37288 418 aa13.51□□□□□ -0.25
CLIP2-209ENST00000493166 USP8P40818 1118 aa13.51□□□□□ -0.25
CLIP2-209ENST00000493166 VIPR2P41587 438 aa13.51□□□□□ -0.25
CLIP2-209ENST00000493166 PPP3CCP48454 512 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms