RNA–Protein interactions for RNA: ENST00000493039.5

CSTF1-206, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 2,234 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-206ENST00000493039 TGM5O43548 720 aa9.91□□□□□ -0.82
CSTF1-206ENST00000493039 SOAT2O75908 522 aa9.91□□□□□ -0.82
CSTF1-206ENST00000493039 SPATA31D3P0C874 917 aa9.91□□□□□ -0.82
CSTF1-206ENST00000493039 UNGP13051 313 aaPredicted RBP9.91□□□□□ -0.82
CSTF1-206ENST00000493039 ATF2P15336 505 aa9.91□□□□□ -0.82
CSTF1-206ENST00000493039 CYP27A1Q02318 531 aa9.91□□□□□ -0.82
CSTF1-206ENST00000493039 ADCY1Q08828 1119 aa9.91□□□□□ -0.82
CSTF1-206ENST00000493039 DUSP4Q13115 394 aa9.91□□□□□ -0.82
CSTF1-206ENST00000493039 ADGRE1Q14246 886 aa9.91□□□□□ -0.82
CSTF1-206ENST00000493039 SMC1AQ14683 1233 aaKnown RBP9.91□□□□□ -0.82
CSTF1-206ENST00000493039 GOLGA7BQ2TAP0 167 aa9.91□□□□□ -0.82
CSTF1-206ENST00000493039 CLEC20AQ6ZU45 233 aa9.91□□□□□ -0.82
CSTF1-206ENST00000493039 SPATA31D4Q6ZUB0 917 aa9.91□□□□□ -0.82
CSTF1-206ENST00000493039 FAM35AQ86V20 835 aa9.91□□□□□ -0.82
CSTF1-206ENST00000493039 ZNF677Q86XU0 584 aa9.91□□□□□ -0.82
CSTF1-206ENST00000493039 DCP1BQ8IZD4 617 aaKnown RBP9.91□□□□□ -0.82
CSTF1-206ENST00000493039 PMM1Q92871 262 aa9.91□□□□□ -0.82
CSTF1-206ENST00000493039 CSNK1G1Q9HCP0 422 aa9.91□□□□□ -0.82
CSTF1-206ENST00000493039 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.91□□□□□ -0.82
CSTF1-206ENST00000493039 KLHL42Q9P2K6 505 aa9.91□□□□□ -0.82
CSTF1-206ENST00000493039 BZW2Q9Y6E2 419 aaKnown RBP9.91□□□□□ -0.82
CSTF1-206ENST00000493039 COL6A3P12111 3177 aa9.91□□□□□ -0.82
CSTF1-206ENST00000493039 HHLA1C9JL84 531 aa9.91□□□□□ -0.82
CSTF1-206ENST00000493039 CPB1P15086 417 aa9.91□□□□□ -0.82
CSTF1-206ENST00000493039 CDH5P33151 784 aaPredicted RBP9.91□□□□□ -0.82
CSTF1-206ENST00000493039 GPR15P49685 360 aa9.91□□□□□ -0.82
CSTF1-206ENST00000493039 NDUFV1P49821 464 aa9.91□□□□□ -0.82
CSTF1-206ENST00000493039 NOMO3P69849 1222 aa9.91□□□□□ -0.82
CSTF1-206ENST00000493039 GFPT1Q06210 699 aaPredicted RBP9.91□□□□□ -0.82
CSTF1-206ENST00000493039 NFE2Q16621 373 aaPredicted RBP9.91□□□□□ -0.82
CSTF1-206ENST00000493039 TDRD12Q587J7 1177 aaKnown RBP9.91□□□□□ -0.82
CSTF1-206ENST00000493039 PMF1Q6P1K2 205 aa9.91□□□□□ -0.82
CSTF1-206ENST00000493039 FMNL3Q8IVF7 1028 aa9.91□□□□□ -0.82
CSTF1-206ENST00000493039 FEZF2Q8TBJ5 459 aa9.91□□□□□ -0.82
CSTF1-206ENST00000493039 CPA5Q8WXQ8 436 aa9.91□□□□□ -0.82
CSTF1-206ENST00000493039 DUSP16Q9BY84 665 aa9.91□□□□□ -0.82
CSTF1-206ENST00000493039 LHX5Q9H2C1 402 aa9.91□□□□□ -0.82
CSTF1-206ENST00000493039 PRDM12Q9H4Q4 367 aa9.91□□□□□ -0.82
CSTF1-206ENST00000493039 SPTLC3Q9NUV7 552 aa9.91□□□□□ -0.82
CSTF1-206ENST00000493039 ZNHIT6Q9NWK9 470 aaKnown RBP9.91□□□□□ -0.82
CSTF1-206ENST00000493039 ABI2Q9NYB9 513 aaPredicted RBP9.91□□□□□ -0.82
CSTF1-206ENST00000493039 TJP2Q9UDY2 1190 aa9.91□□□□□ -0.82
CSTF1-206ENST00000493039 AFF4Q9UHB7 1163 aaKnown RBP9.91□□□□□ -0.82
CSTF1-206ENST00000493039 REXO2Q9Y3B8 237 aaKnown RBP9.91□□□□□ -0.82
CSTF1-206ENST00000493039 PRRC2BQ5JSZ5 2229 aaKnown RBP9.91□□□□□ -0.82
CSTF1-206ENST00000493039 M0QYV0 167 aa9.9□□□□□ -0.82
CSTF1-206ENST00000493039 PPP1R12AO14974 1030 aaPredicted RBP9.9□□□□□ -0.82
CSTF1-206ENST00000493039 CLASP2O75122 1294 aaKnown RBP9.9□□□□□ -0.82
CSTF1-206ENST00000493039 GTF2F1P35269 517 aaKnown RBP eCLIP9.9□□□□□ -0.82
CSTF1-206ENST00000493039 CLCN4P51793 760 aa9.9□□□□□ -0.82
CSTF1-206ENST00000493039 KCNC3Q14003 757 aa9.9□□□□□ -0.82
CSTF1-206ENST00000493039 BMS1Q14692 1282 aaKnown RBP9.9□□□□□ -0.82
CSTF1-206ENST00000493039 MAPRE1Q15691 268 aaKnown RBP9.9□□□□□ -0.82
CSTF1-206ENST00000493039 TSR1Q2NL82 804 aaKnown RBP9.9□□□□□ -0.82
CSTF1-206ENST00000493039 C11orf91Q3C1V1 193 aa9.9□□□□□ -0.82
CSTF1-206ENST00000493039 C2CD6Q53TS8 623 aa9.9□□□□□ -0.82
CSTF1-206ENST00000493039 TPGS2Q68CL5 300 aa9.9□□□□□ -0.82
CSTF1-206ENST00000493039 CYP26C1Q6V0L0 522 aa9.9□□□□□ -0.82
CSTF1-206ENST00000493039 GPRIN1Q7Z2K8 1008 aa9.9□□□□□ -0.82
CSTF1-206ENST00000493039 TMTC1Q8IUR5 882 aa9.9□□□□□ -0.82
CSTF1-206ENST00000493039 MRPL38Q96DV4 380 aaKnown RBP9.9□□□□□ -0.82
CSTF1-206ENST00000493039 FUBP3Q96I24 572 aaKnown RBP eCLIP9.9□□□□□ -0.82
CSTF1-206ENST00000493039 KRT82Q9NSB4 513 aa9.9□□□□□ -0.82
CSTF1-206ENST00000493039 NAGPAQ9UK23 515 aa9.9□□□□□ -0.82
CSTF1-206ENST00000493039 SSX2IPQ9Y2D8 614 aa9.9□□□□□ -0.82
CSTF1-206ENST00000493039 F8VP50 259 aa9.9□□□□□ -0.83
CSTF1-206ENST00000493039 AP1G2O75843 785 aa9.9□□□□□ -0.83
CSTF1-206ENST00000493039 LCA5LO95447 670 aa9.9□□□□□ -0.83
CSTF1-206ENST00000493039 HAPLN1P10915 354 aaPredicted RBP9.9□□□□□ -0.83
CSTF1-206ENST00000493039 NPR3P17342 541 aa9.9□□□□□ -0.83
CSTF1-206ENST00000493039 TNFAIP3P21580 790 aa9.9□□□□□ -0.83
CSTF1-206ENST00000493039 RPL34P49207 117 aaKnown RBP9.9□□□□□ -0.83
CSTF1-206ENST00000493039 KIF11P52732 1056 aa9.9□□□□□ -0.83
CSTF1-206ENST00000493039 GYS2P54840 703 aa9.9□□□□□ -0.83
CSTF1-206ENST00000493039 MAP3K7CLP57077 242 aa9.9□□□□□ -0.83
CSTF1-206ENST00000493039 PTP4A2Q12974 167 aa9.9□□□□□ -0.83
CSTF1-206ENST00000493039 STILQ15468 1287 aa9.9□□□□□ -0.83
CSTF1-206ENST00000493039 SLC18A3Q16572 532 aa9.9□□□□□ -0.83
CSTF1-206ENST00000493039 DDR2Q16832 855 aa9.9□□□□□ -0.83
CSTF1-206ENST00000493039 CLEC16AQ2KHT3 1053 aa9.9□□□□□ -0.83
CSTF1-206ENST00000493039 SDHAF4Q5VUM1 108 aa9.9□□□□□ -0.83
CSTF1-206ENST00000493039 NAA35Q5VZE5 725 aa9.9□□□□□ -0.83
CSTF1-206ENST00000493039 PDE12Q6L8Q7 609 aaKnown RBP9.9□□□□□ -0.83
CSTF1-206ENST00000493039 C4orf50Q6ZRC1 276 aa9.9□□□□□ -0.83
CSTF1-206ENST00000493039 RBM23Q86U06 439 aaKnown RBP9.9□□□□□ -0.83
CSTF1-206ENST00000493039 SPATA2LQ8IUW3 424 aaPredicted RBP9.9□□□□□ -0.83
CSTF1-206ENST00000493039 C1orf131Q8NDD1 294 aaKnown RBP9.9□□□□□ -0.83
CSTF1-206ENST00000493039 STKLD1Q8NE28 680 aa9.9□□□□□ -0.83
CSTF1-206ENST00000493039 VN1R2Q8NFZ6 395 aa9.9□□□□□ -0.83
CSTF1-206ENST00000493039 SLC22A17Q8WUG5 538 aa9.9□□□□□ -0.83
CSTF1-206ENST00000493039 CCDC42Q96M95 316 aa9.9□□□□□ -0.83
CSTF1-206ENST00000493039 CPXM1Q96SM3 734 aa9.9□□□□□ -0.83
CSTF1-206ENST00000493039 LMAN2LQ9H0V9 348 aa9.9□□□□□ -0.83
CSTF1-206ENST00000493039 ABCB6Q9NP58 842 aa9.9□□□□□ -0.83
CSTF1-206ENST00000493039 PCDHB5Q9Y5E4 795 aa9.9□□□□□ -0.83
CSTF1-206ENST00000493039 EPN1Q9Y6I3 576 aaPredicted RBP9.9□□□□□ -0.83
CSTF1-206ENST00000493039 TMEM265A0A087WTH1 108 aa9.89□□□□□ -0.83
CSTF1-206ENST00000493039 A0A0U1RQJ8 604 aa9.89□□□□□ -0.83
CSTF1-206ENST00000493039 GOLGA6L6A8MZA4 724 aa9.89□□□□□ -0.83
CSTF1-206ENST00000493039 TNFRSF10BO14763 440 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms