RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 ZNF396Q96N95 335 aaPredicted RBP9.75□□□□□ -0.85
HDAC3-212ENST00000492407 CYP2S1Q96SQ9 504 aa9.75□□□□□ -0.85
HDAC3-212ENST00000492407 C7orf25Q9BPX7 421 aa9.75□□□□□ -0.85
HDAC3-212ENST00000492407 PANK2Q9BZ23 570 aa9.75□□□□□ -0.85
HDAC3-212ENST00000492407 TRIM9Q9C026 710 aa9.75□□□□□ -0.85
HDAC3-212ENST00000492407 ARRDC1-AS1Q9H2J1 176 aa9.75□□□□□ -0.85
HDAC3-212ENST00000492407 PCIF1Q9H4Z3 704 aa9.75□□□□□ -0.85
HDAC3-212ENST00000492407 FBRSL1Q9HCM7 1045 aaKnown RBP9.75□□□□□ -0.85
HDAC3-212ENST00000492407 COMMD8Q9NX08 183 aa9.75□□□□□ -0.85
HDAC3-212ENST00000492407 HSPBP1Q9NZL4 362 aa9.75□□□□□ -0.85
HDAC3-212ENST00000492407 MTMR6Q9Y217 621 aa9.75□□□□□ -0.85
HDAC3-212ENST00000492407 SCN1AP35498 2009 aa9.74□□□□□ -0.85
HDAC3-212ENST00000492407 A0A087X0B3 334 aa9.74□□□□□ -0.85
HDAC3-212ENST00000492407 PVALEFA0A1B0GWK0 134 aa9.74□□□□□ -0.85
HDAC3-212ENST00000492407 ZNF840PA6NDX5 716 aa9.74□□□□□ -0.85
HDAC3-212ENST00000492407 SPTLC2O15270 562 aa9.74□□□□□ -0.85
HDAC3-212ENST00000492407 STX6O43752 255 aa9.74□□□□□ -0.85
HDAC3-212ENST00000492407 CUTAO60888 179 aa9.74□□□□□ -0.85
HDAC3-212ENST00000492407 LMO2P25791 158 aa9.74□□□□□ -0.85
HDAC3-212ENST00000492407 GRIK1P39086 918 aa9.74□□□□□ -0.85
HDAC3-212ENST00000492407 MRPS21P82921 87 aaKnown RBP9.74□□□□□ -0.85
HDAC3-212ENST00000492407 CEBPZQ03701 1054 aaKnown RBP9.74□□□□□ -0.85
HDAC3-212ENST00000492407 DMC1Q14565 340 aa9.74□□□□□ -0.85
HDAC3-212ENST00000492407 STK38Q15208 465 aa9.74□□□□□ -0.85
HDAC3-212ENST00000492407 SNRNP35Q16560 246 aaKnown RBP9.74□□□□□ -0.85
HDAC3-212ENST00000492407 PLK5Q496M5 336 aa9.74□□□□□ -0.85
HDAC3-212ENST00000492407 PREPLQ4J6C6 727 aaPredicted RBP9.74□□□□□ -0.85
HDAC3-212ENST00000492407 AASDHQ4L235 1098 aaPredicted RBP9.74□□□□□ -0.85
HDAC3-212ENST00000492407 USP39Q53GS9 565 aaKnown RBP9.74□□□□□ -0.85
HDAC3-212ENST00000492407 SDHAF4Q5VUM1 108 aa9.74□□□□□ -0.85
HDAC3-212ENST00000492407 PKN3Q6P5Z2 889 aa9.74□□□□□ -0.85
HDAC3-212ENST00000492407 KBTBD6Q86V97 674 aa9.74□□□□□ -0.85
HDAC3-212ENST00000492407 RASSF3Q86WH2 238 aa9.74□□□□□ -0.85
HDAC3-212ENST00000492407 CBWD2Q8IUF1 395 aa9.74□□□□□ -0.85
HDAC3-212ENST00000492407 ADGRG2Q8IZP9 1017 aa9.74□□□□□ -0.85
HDAC3-212ENST00000492407 ARL14EPQ8N8R7 260 aaPredicted RBP9.74□□□□□ -0.85
HDAC3-212ENST00000492407 XXYLT1Q8NBI6 393 aa9.74□□□□□ -0.85
HDAC3-212ENST00000492407 PDZD8Q8NEN9 1154 aa9.74□□□□□ -0.85
HDAC3-212ENST00000492407 RPLP0P6Q8NHW5 317 aa9.74□□□□□ -0.85
HDAC3-212ENST00000492407 MYLPFQ96A32 169 aa9.74□□□□□ -0.85
HDAC3-212ENST00000492407 OTUB2Q96DC9 234 aa9.74□□□□□ -0.85
HDAC3-212ENST00000492407 CNTNAP3BQ96NU0 1288 aa9.74□□□□□ -0.85
HDAC3-212ENST00000492407 FNBP1Q96RU3 617 aa9.74□□□□□ -0.85
HDAC3-212ENST00000492407 SLC22A12Q96S37 553 aa9.74□□□□□ -0.85
HDAC3-212ENST00000492407 FGFBP2Q9BYJ0 223 aa9.74□□□□□ -0.85
HDAC3-212ENST00000492407 CNTNAP3Q9BZ76 1288 aa9.74□□□□□ -0.85
HDAC3-212ENST00000492407 ELOVL4Q9GZR5 314 aa9.74□□□□□ -0.85
HDAC3-212ENST00000492407 DUSP15Q9H1R2 295 aaPredicted RBP9.74□□□□□ -0.85
HDAC3-212ENST00000492407 SNX25Q9H3E2 840 aa9.74□□□□□ -0.85
HDAC3-212ENST00000492407 VRTNQ9H8Y1 702 aa9.74□□□□□ -0.85
HDAC3-212ENST00000492407 TRPC7Q9HCX4 862 aa9.74□□□□□ -0.85
HDAC3-212ENST00000492407 CRTAC1Q9NQ79 661 aa9.74□□□□□ -0.85
HDAC3-212ENST00000492407 AGPAT3Q9NRZ7 376 aa9.74□□□□□ -0.85
HDAC3-212ENST00000492407 TBC1D14Q9P2M4 693 aa9.74□□□□□ -0.85
HDAC3-212ENST00000492407 KIF26AQ9ULI4 1882 aaPredicted RBP9.74□□□□□ -0.85
HDAC3-212ENST00000492407 C2orf78A6NCI8 922 aa9.73□□□□□ -0.85
HDAC3-212ENST00000492407 LEFTY2O00292 366 aa9.73□□□□□ -0.85
HDAC3-212ENST00000492407 TGFB1I1O43294 461 aa9.73□□□□□ -0.85
HDAC3-212ENST00000492407 GDF9O60383 454 aa9.73□□□□□ -0.85
HDAC3-212ENST00000492407 RTN3O95197 1032 aaPredicted RBP9.73□□□□□ -0.85
HDAC3-212ENST00000492407 HSP90AA1P07900 732 aaKnown RBP9.73□□□□□ -0.85
HDAC3-212ENST00000492407 PTPN1P18031 435 aaKnown RBP9.73□□□□□ -0.85
HDAC3-212ENST00000492407 TNNI1P19237 187 aa9.73□□□□□ -0.85
HDAC3-212ENST00000492407 BDNFP23560 247 aa9.73□□□□□ -0.85
HDAC3-212ENST00000492407 HOXD13P35453 343 aa9.73□□□□□ -0.85
HDAC3-212ENST00000492407 MPLP40238 635 aa9.73□□□□□ -0.85
HDAC3-212ENST00000492407 DPP6P42658 865 aa9.73□□□□□ -0.85
HDAC3-212ENST00000492407 DGKEP52429 567 aa9.73□□□□□ -0.85
HDAC3-212ENST00000492407 SHC2P98077 582 aa9.73□□□□□ -0.85
HDAC3-212ENST00000492407 CYP27A1Q02318 531 aa9.73□□□□□ -0.85
HDAC3-212ENST00000492407 EHHADHQ08426 723 aa9.73□□□□□ -0.85
HDAC3-212ENST00000492407 BMT2Q1RMZ1 405 aa9.73□□□□□ -0.85
HDAC3-212ENST00000492407 SPDYCQ5MJ68 293 aa9.73□□□□□ -0.85
HDAC3-212ENST00000492407 FAM26FQ5R3K3 315 aa9.73□□□□□ -0.85
HDAC3-212ENST00000492407 STPG1Q5TH74 334 aa9.73□□□□□ -0.85
HDAC3-212ENST00000492407 SNX30Q5VWJ9 437 aa9.73□□□□□ -0.85
HDAC3-212ENST00000492407 TDRD10Q5VZ19 366 aaKnown RBP9.73□□□□□ -0.85
HDAC3-212ENST00000492407 ATL3Q6DD88 541 aa9.73□□□□□ -0.85
HDAC3-212ENST00000492407 FAM173BQ6P4H8 233 aa9.73□□□□□ -0.85
HDAC3-212ENST00000492407 UNC13DQ70J99 1090 aa9.73□□□□□ -0.85
HDAC3-212ENST00000492407 HS2ST1Q7LGA3 356 aa9.73□□□□□ -0.85
HDAC3-212ENST00000492407 PDILTQ8N807 584 aa9.73□□□□□ -0.85
HDAC3-212ENST00000492407 GOLGA5Q8TBA6 731 aa9.73□□□□□ -0.85
HDAC3-212ENST00000492407 KCNV2Q8TDN2 545 aa9.73□□□□□ -0.85
HDAC3-212ENST00000492407 USP33Q8TEY7 942 aa9.73□□□□□ -0.85
HDAC3-212ENST00000492407 SYAP1Q96A49 352 aaPredicted RBP9.73□□□□□ -0.85
HDAC3-212ENST00000492407 PCED1BQ96HM7 432 aa9.73□□□□□ -0.85
HDAC3-212ENST00000492407 CNOT6LQ96LI5 555 aaKnown RBP9.73□□□□□ -0.85
HDAC3-212ENST00000492407 SLITRK1Q96PX8 696 aa9.73□□□□□ -0.85
HDAC3-212ENST00000492407 MMS19Q96T76 1030 aa9.73□□□□□ -0.85
HDAC3-212ENST00000492407 CGRRF1Q99675 332 aa9.73□□□□□ -0.85
HDAC3-212ENST00000492407 LINC00597Q9H2U6 94 aa9.73□□□□□ -0.85
HDAC3-212ENST00000492407 WNT6Q9Y6F9 365 aa9.73□□□□□ -0.85
HDAC3-212ENST00000492407 PTPRJQ12913 1337 aa9.73□□□□□ -0.85
HDAC3-212ENST00000492407 ANK1P16157 1881 aa9.72□□□□□ -0.85
HDAC3-212ENST00000492407 E2F8A0AVK6 867 aa9.72□□□□□ -0.85
HDAC3-212ENST00000492407 BCLAF3A2AJT9 711 aaKnown RBP9.72□□□□□ -0.85
HDAC3-212ENST00000492407 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.72□□□□□ -0.85
HDAC3-212ENST00000492407 K7EQS6 105 aa9.72□□□□□ -0.85
HDAC3-212ENST00000492407 ATP2C2O75185 946 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms