RNA–Protein interactions for RNA: ENST00000492275.5

TTC3-223, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 3

Gene TTC3, Length 769 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-223ENST00000492275 ASB16Q96NS5 453 aa27.36■■□□□ 1.97
TTC3-223ENST00000492275 BPIFA3Q9BQP9 254 aa27.36■■□□□ 1.97
TTC3-223ENST00000492275 TTLL2Q9BWV7 592 aa27.36■■□□□ 1.97
TTC3-223ENST00000492275 GPR88Q9GZN0 384 aa27.36■■□□□ 1.97
TTC3-223ENST00000492275 NAT10Q9H0A0 1025 aaKnown RBP27.36■■□□□ 1.97
TTC3-223ENST00000492275 UBE2TQ9NPD8 197 aaPredicted RBP27.36■■□□□ 1.97
TTC3-223ENST00000492275 DMAP1Q9NPF5 467 aaPredicted RBP27.36■■□□□ 1.97
TTC3-223ENST00000492275 UXTQ9UBK9 157 aaPredicted RBP27.36■■□□□ 1.97
TTC3-223ENST00000492275 PCDHB4Q9Y5E5 795 aa27.36■■□□□ 1.97
TTC3-223ENST00000492275 PATJQ8NI35 1801 aa27.36■■□□□ 1.97
TTC3-223ENST00000492275 TNFRSF10BO14763 440 aa27.35■■□□□ 1.97
TTC3-223ENST00000492275 FCARP24071 287 aa27.35■■□□□ 1.97
TTC3-223ENST00000492275 MAP3K7CLP57077 242 aa27.35■■□□□ 1.97
TTC3-223ENST00000492275 KCNMA1Q12791 1236 aa27.35■■□□□ 1.97
TTC3-223ENST00000492275 GPR158Q5T848 1215 aa27.35■■□□□ 1.97
TTC3-223ENST00000492275 ARHGAP17Q68EM7 881 aa27.35■■□□□ 1.97
TTC3-223ENST00000492275 TANGO2Q6ICL3 276 aa27.35■■□□□ 1.97
TTC3-223ENST00000492275 DPY19L2P1Q6NXN4 242 aa27.35■■□□□ 1.97
TTC3-223ENST00000492275 MTSS1LQ765P7 747 aa27.35■■□□□ 1.97
TTC3-223ENST00000492275 EDAQ92838 391 aa27.35■■□□□ 1.97
TTC3-223ENST00000492275 SIX2Q9NPC8 291 aa27.35■■□□□ 1.97
TTC3-223ENST00000492275 NUP210Q8TEM1 1887 aaPredicted RBP27.35■■□□□ 1.97
TTC3-223ENST00000492275 FAM200BP0CF97 657 aa27.34■■□□□ 1.97
TTC3-223ENST00000492275 ZNF18P17022 549 aa27.34■■□□□ 1.97
TTC3-223ENST00000492275 ARHGAP15Q53QZ3 475 aa27.34■■□□□ 1.97
TTC3-223ENST00000492275 TMEM270Q6UE05 265 aa27.34■■□□□ 1.97
TTC3-223ENST00000492275 CLEC20AQ6ZU45 233 aa27.34■■□□□ 1.97
TTC3-223ENST00000492275 DHX40Q8IX18 779 aaKnown RBP27.34■■□□□ 1.97
TTC3-223ENST00000492275 NUP93Q8N1F7 819 aa27.34■■□□□ 1.97
TTC3-223ENST00000492275 ZSCAN18Q8TBC5 510 aaPredicted RBP27.34■■□□□ 1.97
TTC3-223ENST00000492275 GCNAQ96QF7 691 aa27.34■■□□□ 1.97
TTC3-223ENST00000492275 KXD1Q9BQD3 176 aa27.34■■□□□ 1.97
TTC3-223ENST00000492275 SLC46A2Q9BY10 475 aa27.34■■□□□ 1.97
TTC3-223ENST00000492275 PLA2G2FQ9BZM2 168 aa27.34■■□□□ 1.97
TTC3-223ENST00000492275 VPS16Q9H269 839 aa27.34■■□□□ 1.97
TTC3-223ENST00000492275 TASP1Q9H6P5 420 aa27.34■■□□□ 1.97
TTC3-223ENST00000492275 SMARCD2Q92925 531 aa27.33■■□□□ 1.97
TTC3-223ENST00000492275 JAKMIP2Q96AA8 810 aa27.33■■□□□ 1.97
TTC3-223ENST00000492275 DUSP16Q9BY84 665 aa27.33■■□□□ 1.97
TTC3-223ENST00000492275 SLITRK6Q9H5Y7 841 aa27.33■■□□□ 1.97
TTC3-223ENST00000492275 TRPV4Q9HBA0 871 aa27.33■■□□□ 1.97
TTC3-223ENST00000492275 CNTN6Q9UQ52 1028 aa27.33■■□□□ 1.97
TTC3-223ENST00000492275 TECTAO75443 2155 aa27.32■■□□□ 1.96
TTC3-223ENST00000492275 HHLA1C9JL84 531 aa27.32■■□□□ 1.96
TTC3-223ENST00000492275 NARSO43776 548 aaKnown RBP27.32■■□□□ 1.96
TTC3-223ENST00000492275 ECI2O75521 394 aa27.32■■□□□ 1.96
TTC3-223ENST00000492275 GPIHBP1Q8IV16 184 aa27.32■■□□□ 1.96
TTC3-223ENST00000492275 SCAMP5Q8TAC9 235 aa27.32■■□□□ 1.96
TTC3-223ENST00000492275 IL37Q9NZH6 218 aa27.32■■□□□ 1.96
TTC3-223ENST00000492275 APEX2Q9UBZ4 518 aa27.32■■□□□ 1.96
TTC3-223ENST00000492275 LIMA1Q9UHB6 759 aaKnown RBP27.32■■□□□ 1.96
TTC3-223ENST00000492275 PES1O00541 588 aaKnown RBP27.31■■□□□ 1.96
TTC3-223ENST00000492275 CALCAP01258 141 aa27.31■■□□□ 1.96
TTC3-223ENST00000492275 PAEPP09466 180 aa27.31■■□□□ 1.96
TTC3-223ENST00000492275 VDRP11473 427 aa27.31■■□□□ 1.96
TTC3-223ENST00000492275 VIPR2P41587 438 aa27.31■■□□□ 1.96
TTC3-223ENST00000492275 ZNF165P49910 485 aa27.31■■□□□ 1.96
TTC3-223ENST00000492275 ZNF132P52740 706 aa27.31■■□□□ 1.96
TTC3-223ENST00000492275 SLC5A3P53794 718 aa27.31■■□□□ 1.96
TTC3-223ENST00000492275 NFKBIBQ15653 356 aa27.31■■□□□ 1.96
TTC3-223ENST00000492275 ZSCAN23Q3MJ62 389 aa27.31■■□□□ 1.96
TTC3-223ENST00000492275 TXNDC8Q6A555 127 aa27.31■■□□□ 1.96
TTC3-223ENST00000492275 ENOSF1Q7L5Y1 443 aa27.31■■□□□ 1.96
TTC3-223ENST00000492275 ARID3BQ8IVW6 561 aaPredicted RBP27.31■■□□□ 1.96
TTC3-223ENST00000492275 UBALD2Q8IYN6 164 aa27.31■■□□□ 1.96
TTC3-223ENST00000492275 RBBP8NLQ8NC74 664 aaPredicted RBP27.31■■□□□ 1.96
TTC3-223ENST00000492275 TFAP2BQ92481 460 aa27.31■■□□□ 1.96
TTC3-223ENST00000492275 ELSPBP1Q96BH3 223 aa27.31■■□□□ 1.96
TTC3-223ENST00000492275 ZSWIM1Q9BR11 485 aa27.31■■□□□ 1.96
TTC3-223ENST00000492275 ZFP14Q9HCL3 533 aa27.31■■□□□ 1.96
TTC3-223ENST00000492275 EHD2Q9NZN4 543 aa27.31■■□□□ 1.96
TTC3-223ENST00000492275 AJAP1Q9UKB5 411 aaPredicted RBP27.31■■□□□ 1.96
TTC3-223ENST00000492275 KIAA1257Q9ULG3 409 aa27.31■■□□□ 1.96
TTC3-223ENST00000492275 DUSP12Q9UNI6 340 aa27.31■■□□□ 1.96
TTC3-223ENST00000492275 LRRC10BA6NIK2 292 aa27.3■■□□□ 1.96
TTC3-223ENST00000492275 RTN3O95197 1032 aaPredicted RBP27.3■■□□□ 1.96
TTC3-223ENST00000492275 CD19P15391 556 aa27.3■■□□□ 1.96
TTC3-223ENST00000492275 NPR3P17342 541 aa27.3■■□□□ 1.96
TTC3-223ENST00000492275 YWHAQP27348 245 aa27.3■■□□□ 1.96
TTC3-223ENST00000492275 COPB1P53618 953 aaKnown RBP27.3■■□□□ 1.96
TTC3-223ENST00000492275 MFAP3P55082 362 aa27.3■■□□□ 1.96
TTC3-223ENST00000492275 TAF10Q12962 218 aa27.3■■□□□ 1.96
TTC3-223ENST00000492275 SGO2Q562F6 1265 aa27.3■■□□□ 1.96
TTC3-223ENST00000492275 APTXQ7Z2E3 356 aaKnown RBP27.3■■□□□ 1.96
TTC3-223ENST00000492275 MON1AQ86VX9 555 aa27.3■■□□□ 1.96
TTC3-223ENST00000492275 MAB21L3Q8N8X9 362 aa27.3■■□□□ 1.96
TTC3-223ENST00000492275 ANKRD52Q8NB46 1076 aa27.3■■□□□ 1.96
TTC3-223ENST00000492275 MRPS31Q92665 395 aaKnown RBP27.3■■□□□ 1.96
TTC3-223ENST00000492275 RSPRY1Q96DX4 576 aa27.3■■□□□ 1.96
TTC3-223ENST00000492275 NCANO14594 1321 aa27.3■■□□□ 1.96
TTC3-223ENST00000492275 SOBPA7XYQ1 873 aa27.29■■□□□ 1.96
TTC3-223ENST00000492275 DDX6P26196 483 aaKnown RBP eCLIP27.29■■□□□ 1.967e-7■□□□□ 9.2
TTC3-223ENST00000492275 WEE1P30291 646 aa27.29■■□□□ 1.96
TTC3-223ENST00000492275 IFRD2Q12894 506 aaPredicted RBP27.29■■□□□ 1.96
TTC3-223ENST00000492275 IQCB1Q15051 598 aa27.29■■□□□ 1.96
TTC3-223ENST00000492275 GPRIN1Q7Z2K8 1008 aa27.29■■□□□ 1.96
TTC3-223ENST00000492275 TTC30AQ86WT1 665 aa27.29■■□□□ 1.96
TTC3-223ENST00000492275 FAM81BQ96LP2 452 aa27.29■■□□□ 1.96
TTC3-223ENST00000492275 C11orf16Q9NQ32 467 aa27.29■■□□□ 1.96
TTC3-223ENST00000492275 COMMD8Q9NX08 183 aa27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms