RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 CLIC2O15247 247 aa9.33□□□□□ -0.92
NUP50-217ENST00000491860 TGFB1I1O43294 461 aa9.33□□□□□ -0.92
NUP50-217ENST00000491860 RPN1P04843 607 aaKnown RBP9.33□□□□□ -0.92
NUP50-217ENST00000491860 HDCP19113 662 aa9.33□□□□□ -0.92
NUP50-217ENST00000491860 BDNFP23560 247 aa9.33□□□□□ -0.92
NUP50-217ENST00000491860 HOXD13P35453 343 aa9.33□□□□□ -0.92
NUP50-217ENST00000491860 GPR15P49685 360 aa9.33□□□□□ -0.92
NUP50-217ENST00000491860 CLDN10P78369 228 aa9.33□□□□□ -0.92
NUP50-217ENST00000491860 TNK2Q07912 1038 aa9.33□□□□□ -0.92
NUP50-217ENST00000491860 GAS6Q14393 721 aa9.33□□□□□ -0.92
NUP50-217ENST00000491860 ZNF77Q15935 545 aa9.33□□□□□ -0.92
NUP50-217ENST00000491860 PREPLQ4J6C6 727 aaPredicted RBP9.33□□□□□ -0.92
NUP50-217ENST00000491860 ZNF667Q5HYK9 610 aa9.33□□□□□ -0.92
NUP50-217ENST00000491860 TDRD10Q5VZ19 366 aaKnown RBP9.33□□□□□ -0.92
NUP50-217ENST00000491860 TXNDC11Q6PKC3 985 aa9.33□□□□□ -0.92
NUP50-217ENST00000491860 CEP68Q76N32 757 aa9.33□□□□□ -0.92
NUP50-217ENST00000491860 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.33□□□□□ -0.92
NUP50-217ENST00000491860 C11orf74Q86VG3 221 aa9.33□□□□□ -0.92
NUP50-217ENST00000491860 OSTM1Q86WC4 334 aa9.33□□□□□ -0.92
NUP50-217ENST00000491860 NELFCDQ8IXH7 590 aa9.33□□□□□ -0.92
NUP50-217ENST00000491860 RDH13Q8NBN7 331 aa9.33□□□□□ -0.92
NUP50-217ENST00000491860 OR6B3Q8NGW1 331 aa9.33□□□□□ -0.92
NUP50-217ENST00000491860 NETO1Q8TDF5 533 aa9.33□□□□□ -0.92
NUP50-217ENST00000491860 TAF4BQ92750 862 aa9.33□□□□□ -0.92
NUP50-217ENST00000491860 HPS3Q969F9 1004 aa9.33□□□□□ -0.92
NUP50-217ENST00000491860 CCDC127Q96BQ5 260 aa9.33□□□□□ -0.92
NUP50-217ENST00000491860 PCED1BQ96HM7 432 aa9.33□□□□□ -0.92
NUP50-217ENST00000491860 P2RY13Q9BPV8 354 aa9.33□□□□□ -0.92
NUP50-217ENST00000491860 SMG9Q9H0W8 520 aaKnown RBP9.33□□□□□ -0.92
NUP50-217ENST00000491860 EBF3Q9H4W6 596 aa9.33□□□□□ -0.92
NUP50-217ENST00000491860 ECT2Q9H8V3 914 aa9.33□□□□□ -0.92
NUP50-217ENST00000491860 SLC39A2Q9NP94 309 aa9.33□□□□□ -0.92
NUP50-217ENST00000491860 PARD6AQ9NPB6 346 aa9.33□□□□□ -0.92
NUP50-217ENST00000491860 HPS4Q9NQG7 708 aa9.33□□□□□ -0.92
NUP50-217ENST00000491860 GCNT4Q9P109 453 aa9.33□□□□□ -0.92
NUP50-217ENST00000491860 USP18Q9UMW8 372 aa9.33□□□□□ -0.92
NUP50-217ENST00000491860 CCL26Q9Y258 94 aa9.33□□□□□ -0.92
NUP50-217ENST00000491860 SPTBN2O15020 2390 aa9.32□□□□□ -0.92
NUP50-217ENST00000491860 PTPRJQ12913 1337 aa9.32□□□□□ -0.92
NUP50-217ENST00000491860 PDXKO00764 312 aa9.32□□□□□ -0.92
NUP50-217ENST00000491860 IKBKBO14920 756 aa9.32□□□□□ -0.92
NUP50-217ENST00000491860 MAPK13O15264 365 aa9.32□□□□□ -0.92
NUP50-217ENST00000491860 TADA3O75528 432 aa9.32□□□□□ -0.92
NUP50-217ENST00000491860 CLSTN1O94985 981 aa9.32□□□□□ -0.92
NUP50-217ENST00000491860 PDGFRBP09619 1106 aa9.32□□□□□ -0.92
NUP50-217ENST00000491860 PTPN1P18031 435 aaKnown RBP9.32□□□□□ -0.92
NUP50-217ENST00000491860 CMA1P23946 247 aa9.32□□□□□ -0.92
NUP50-217ENST00000491860 LMO2P25791 158 aa9.32□□□□□ -0.92
NUP50-217ENST00000491860 GJA4P35212 333 aa9.32□□□□□ -0.92
NUP50-217ENST00000491860 AFMP43652 599 aa9.32□□□□□ -0.92
NUP50-217ENST00000491860 FNTBP49356 437 aa9.32□□□□□ -0.92
NUP50-217ENST00000491860 PSMC1P62191 440 aaKnown RBP9.32□□□□□ -0.92
NUP50-217ENST00000491860 KRT85P78386 507 aa9.32□□□□□ -0.92
NUP50-217ENST00000491860 SLC7A9P82251 487 aa9.32□□□□□ -0.92
NUP50-217ENST00000491860 ENPEPQ07075 957 aa9.32□□□□□ -0.92
NUP50-217ENST00000491860 BIRC3Q13489 604 aa9.32□□□□□ -0.92
NUP50-217ENST00000491860 CUL4BQ13620 913 aa9.32□□□□□ -0.92
NUP50-217ENST00000491860 CSRP2Q16527 193 aa9.32□□□□□ -0.92
NUP50-217ENST00000491860 SGSM1Q2NKQ1 1148 aa9.32□□□□□ -0.92
NUP50-217ENST00000491860 ZNF699Q32M78 642 aa9.32□□□□□ -0.92
NUP50-217ENST00000491860 EML3Q32P44 896 aa9.32□□□□□ -0.92
NUP50-217ENST00000491860 MDH1BQ5I0G3 518 aa9.32□□□□□ -0.92
NUP50-217ENST00000491860 SDHAF4Q5VUM1 108 aa9.32□□□□□ -0.92
NUP50-217ENST00000491860 Q6ZS52 159 aa9.32□□□□□ -0.92
NUP50-217ENST00000491860 CACNA2D4Q7Z3S7 1137 aa9.32□□□□□ -0.92
NUP50-217ENST00000491860 GPIHBP1Q8IV16 184 aa9.32□□□□□ -0.92
NUP50-217ENST00000491860 NUP93Q8N1F7 819 aa9.32□□□□□ -0.92
NUP50-217ENST00000491860 B3GALNT2Q8NCR0 500 aa9.32□□□□□ -0.92
NUP50-217ENST00000491860 GLIS3Q8NEA6 775 aa9.32□□□□□ -0.92
NUP50-217ENST00000491860 TTC8Q8TAM2 541 aa9.32□□□□□ -0.92
NUP50-217ENST00000491860 PARD3BQ8TEW8 1205 aa9.32□□□□□ -0.92
NUP50-217ENST00000491860 DDX1Q92499 740 aaKnown RBP9.32□□□□□ -0.92
NUP50-217ENST00000491860 CD101Q93033 1021 aa9.32□□□□□ -0.92
NUP50-217ENST00000491860 IMPG2Q9BZV3 1241 aa9.32□□□□□ -0.92
NUP50-217ENST00000491860 SCAND2PQ9GZW5 306 aaPredicted RBP9.32□□□□□ -0.92
NUP50-217ENST00000491860 BLZF1Q9H2G9 400 aa9.32□□□□□ -0.92
NUP50-217ENST00000491860 CRTAC1Q9NQ79 661 aa9.32□□□□□ -0.92
NUP50-217ENST00000491860 RBM12Q9NTZ6 932 aaKnown RBP9.32□□□□□ -0.92
NUP50-217ENST00000491860 FRMD4BQ9Y2L6 1034 aa9.32□□□□□ -0.92
NUP50-217ENST00000491860 CHD8Q9HCK8 2581 aa9.32□□□□□ -0.92
NUP50-217ENST00000491860 ZNF840PA6NDX5 716 aa9.31□□□□□ -0.92
NUP50-217ENST00000491860 CALUO43852 315 aaPredicted RBP9.31□□□□□ -0.92
NUP50-217ENST00000491860 ATP2C2O75185 946 aa9.31□□□□□ -0.92
NUP50-217ENST00000491860 CST3P01034 146 aaPredicted RBP9.31□□□□□ -0.92
NUP50-217ENST00000491860 CCDC192P0DO97 292 aa9.31□□□□□ -0.92
NUP50-217ENST00000491860 YWHAQP27348 245 aa9.31□□□□□ -0.92
NUP50-217ENST00000491860 EIF2DP41214 584 aaKnown RBP9.31□□□□□ -0.92
NUP50-217ENST00000491860 TUBP50607 506 aa9.31□□□□□ -0.92
NUP50-217ENST00000491860 MYL6P60660 151 aa9.31□□□□□ -0.92
NUP50-217ENST00000491860 NCOA4Q13772 614 aa9.31□□□□□ -0.92
NUP50-217ENST00000491860 NFIL3Q16649 462 aa9.31□□□□□ -0.92
NUP50-217ENST00000491860 HSF5Q4G112 596 aaPredicted RBP9.31□□□□□ -0.92
NUP50-217ENST00000491860 PPM1JQ5JR12 505 aa9.31□□□□□ -0.92
NUP50-217ENST00000491860 FOXD4L5Q5VV16 416 aaPredicted RBP9.31□□□□□ -0.92
NUP50-217ENST00000491860 TRIM68Q6AZZ1 485 aa9.31□□□□□ -0.92
NUP50-217ENST00000491860 FSTL4Q6MZW2 842 aa9.31□□□□□ -0.92
NUP50-217ENST00000491860 NUDT18Q6ZVK8 323 aa9.31□□□□□ -0.92
NUP50-217ENST00000491860 SYT13Q7L8C5 426 aa9.31□□□□□ -0.92
NUP50-217ENST00000491860 UNC93AQ86WB7 457 aa9.31□□□□□ -0.92
NUP50-217ENST00000491860 CCDC150Q8NCX0 1101 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms