RNA–Protein interactions for RNA: ENST00000491769.1

COL6A3-212, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5

Gene COL6A3, Length 6,731 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-212ENST00000491769 GMNCA6NCL1 334 aa13.61□□□□□ -0.23
COL6A3-212ENST00000491769 C16orf96A6NNT2 1141 aa13.61□□□□□ -0.23
COL6A3-212ENST00000491769 RNF103O00237 685 aa13.61□□□□□ -0.23
COL6A3-212ENST00000491769 HALP42357 657 aa13.61□□□□□ -0.23
COL6A3-212ENST00000491769 LONRF1Q17RB8 773 aa13.61□□□□□ -0.23
COL6A3-212ENST00000491769 FAM83EQ2M2I3 478 aa13.61□□□□□ -0.23
COL6A3-212ENST00000491769 CEP68Q76N32 757 aa13.61□□□□□ -0.23
COL6A3-212ENST00000491769 TSC22D3Q99576 134 aa13.61□□□□□ -0.23
COL6A3-212ENST00000491769 RSPH9Q9H1X1 276 aaPredicted RBP13.61□□□□□ -0.23
COL6A3-212ENST00000491769 TLR8Q9NR97 1041 aaKnown RBP13.61□□□□□ -0.23
COL6A3-212ENST00000491769 SMPD4Q9NXE4 827 aa13.61□□□□□ -0.23
COL6A3-212ENST00000491769 SNX8Q9Y5X2 465 aa13.61□□□□□ -0.23
COL6A3-212ENST00000491769 SPATA31A1Q5TZJ5 1347 aa13.61□□□□□ -0.23
COL6A3-212ENST00000491769 PHF2O75151 1096 aa13.61□□□□□ -0.23
COL6A3-212ENST00000491769 CYP51A1Q16850 503 aa13.61□□□□□ -0.23
COL6A3-212ENST00000491769 SERAC1Q96JX3 654 aa13.61□□□□□ -0.23
COL6A3-212ENST00000491769 TRIM51Q9BSJ1 452 aa13.61□□□□□ -0.23
COL6A3-212ENST00000491769 AKAP5P24588 427 aa13.61□□□□□ -0.23
COL6A3-212ENST00000491769 RAP1GAPP47736 663 aa13.61□□□□□ -0.23
COL6A3-212ENST00000491769 TIGD7Q6NT04 549 aaPredicted RBP13.61□□□□□ -0.23
COL6A3-212ENST00000491769 MTFR1LQ9H019 292 aa13.61□□□□□ -0.23
COL6A3-212ENST00000491769 RERGLQ9H628 205 aa13.61□□□□□ -0.23
COL6A3-212ENST00000491769 PSMC3IPQ9P2W1 217 aaPredicted RBP13.61□□□□□ -0.23
COL6A3-212ENST00000491769 GGT7Q9UJ14 662 aa13.61□□□□□ -0.23
COL6A3-212ENST00000491769 MANSC4A6NHS7 340 aaPredicted RBP13.61□□□□□ -0.23
COL6A3-212ENST00000491769 KPNA6O60684 536 aa13.61□□□□□ -0.23
COL6A3-212ENST00000491769 GALCP54803 685 aa13.61□□□□□ -0.23
COL6A3-212ENST00000491769 XRRA1Q6P2D8 792 aa13.61□□□□□ -0.23
COL6A3-212ENST00000491769 OSMRQ99650 979 aa13.61□□□□□ -0.23
COL6A3-212ENST00000491769 XPNPEP3Q9NQH7 507 aa13.61□□□□□ -0.23
COL6A3-212ENST00000491769 DDNO94850 711 aaPredicted RBP13.6□□□□□ -0.23
COL6A3-212ENST00000491769 LRRC36Q1X8D7 754 aa13.6□□□□□ -0.23
COL6A3-212ENST00000491769 LLGL2Q6P1M3 1020 aa13.6□□□□□ -0.23
COL6A3-212ENST00000491769 CATSPER1Q8NEC5 780 aa13.6□□□□□ -0.23
COL6A3-212ENST00000491769 RIT2Q99578 217 aa13.6□□□□□ -0.23
COL6A3-212ENST00000491769 MTA3Q9BTC8 594 aa13.6□□□□□ -0.23
COL6A3-212ENST00000491769 OXCT2Q9BYC2 517 aaPredicted RBP13.6□□□□□ -0.23
COL6A3-212ENST00000491769 ASCC2Q9H1I8 757 aaPredicted RBP13.6□□□□□ -0.23
COL6A3-212ENST00000491769 FBXO28Q9NVF7 368 aa13.6□□□□□ -0.23
COL6A3-212ENST00000491769 SCN3BQ9NY72 215 aa13.6□□□□□ -0.23
COL6A3-212ENST00000491769 KLF15Q9UIH9 416 aa13.6□□□□□ -0.23
COL6A3-212ENST00000491769 DISP1Q96F81 1524 aa13.6□□□□□ -0.23
COL6A3-212ENST00000491769 KLRC1P26715 233 aa13.6□□□□□ -0.23
COL6A3-212ENST00000491769 PCYT1AP49585 367 aa13.6□□□□□ -0.23
COL6A3-212ENST00000491769 CCDC81Q6ZN84 652 aa13.6□□□□□ -0.23
COL6A3-212ENST00000491769 C9orf72Q96LT7 481 aa13.6□□□□□ -0.23
COL6A3-212ENST00000491769 IMPAD1Q9NX62 359 aa13.6□□□□□ -0.23
COL6A3-212ENST00000491769 ATP6V1HQ9UI12 483 aa13.6□□□□□ -0.23
COL6A3-212ENST00000491769 CAMTA2O94983 1202 aa13.6□□□□□ -0.23
COL6A3-212ENST00000491769 TGM2P21980 687 aa13.6□□□□□ -0.23
COL6A3-212ENST00000491769 RRM2P31350 389 aa13.6□□□□□ -0.23
COL6A3-212ENST00000491769 FAXCQ5TGI0 409 aa13.6□□□□□ -0.23
COL6A3-212ENST00000491769 FAM171A1Q5VUB5 890 aa13.6□□□□□ -0.23
COL6A3-212ENST00000491769 C3orf62Q6ZUJ4 267 aa13.6□□□□□ -0.23
COL6A3-212ENST00000491769 CYFIP2Q96F07 1278 aa13.6□□□□□ -0.23
COL6A3-212ENST00000491769 MS4A14Q96JA4 679 aa13.6□□□□□ -0.23
COL6A3-212ENST00000491769 PGLYRP2Q96PD5 576 aa13.6□□□□□ -0.23
COL6A3-212ENST00000491769 PCDHB2Q9Y5E7 798 aa13.6□□□□□ -0.23
COL6A3-212ENST00000491769 KIF1BO60333 1816 aa13.6□□□□□ -0.23
COL6A3-212ENST00000491769 LRRC14BA6NHZ5 514 aa13.6□□□□□ -0.23
COL6A3-212ENST00000491769 TCP11X1B4DZS4 312 aa13.6□□□□□ -0.23
COL6A3-212ENST00000491769 ZBTB39O15060 712 aa13.6□□□□□ -0.23
COL6A3-212ENST00000491769 GAS2O43903 313 aaKnown RBP13.6□□□□□ -0.23
COL6A3-212ENST00000491769 ERN1O75460 977 aaKnown RBP13.6□□□□□ -0.23
COL6A3-212ENST00000491769 ICAM1P05362 532 aa13.6□□□□□ -0.23
COL6A3-212ENST00000491769 ITGB6P18564 788 aa13.6□□□□□ -0.23
COL6A3-212ENST00000491769 CEP78Q5JTW2 689 aa13.6□□□□□ -0.23
COL6A3-212ENST00000491769 MROH9Q5TGP6 573 aa13.6□□□□□ -0.23
COL6A3-212ENST00000491769 KLF6Q99612 283 aaPredicted RBP13.6□□□□□ -0.23
COL6A3-212ENST00000491769 MTMR12Q9C0I1 747 aa13.6□□□□□ -0.23
COL6A3-212ENST00000491769 JMJD4Q9H9V9 463 aa13.6□□□□□ -0.23
COL6A3-212ENST00000491769 ANKEF1Q9NU02 776 aa13.6□□□□□ -0.23
COL6A3-212ENST00000491769 SETD4Q9NVD3 440 aa13.6□□□□□ -0.23
COL6A3-212ENST00000491769 SOHLH2Q9NX45 425 aa13.6□□□□□ -0.23
COL6A3-212ENST00000491769 MAP3K6O95382 1288 aa13.6□□□□□ -0.23
COL6A3-212ENST00000491769 ADGBQ8N7X0 1667 aa13.59□□□□□ -0.23
COL6A3-212ENST00000491769 CYP2C8P10632 490 aa13.59□□□□□ -0.23
COL6A3-212ENST00000491769 RAD23BP54727 409 aa13.59□□□□□ -0.23
COL6A3-212ENST00000491769 FEZF2Q8TBJ5 459 aa13.59□□□□□ -0.23
COL6A3-212ENST00000491769 ADGRE3Q9BY15 652 aa13.59□□□□□ -0.23
COL6A3-212ENST00000491769 KANSL3Q9P2N6 904 aa13.59□□□□□ -0.23
COL6A3-212ENST00000491769 TBX20Q9UMR3 447 aa13.59□□□□□ -0.23
COL6A3-212ENST00000491769 TIMM13Q9Y5L4 95 aaPredicted RBP13.59□□□□□ -0.23
COL6A3-212ENST00000491769 SCNN1BP51168 640 aa13.59□□□□□ -0.23
COL6A3-212ENST00000491769 SF3B3Q15393 1217 aaKnown RBP13.59□□□□□ -0.23
COL6A3-212ENST00000491769 PTGISQ16647 500 aa13.59□□□□□ -0.23
COL6A3-212ENST00000491769 SLC20A1Q8WUM9 679 aa13.59□□□□□ -0.23
COL6A3-212ENST00000491769 RMND5AQ9H871 391 aa13.59□□□□□ -0.23
COL6A3-212ENST00000491769 NT5MQ9NPB1 228 aa13.59□□□□□ -0.23
COL6A3-212ENST00000491769 MIEF1Q9NQG6 463 aa13.59□□□□□ -0.23
COL6A3-212ENST00000491769 KDM6BO15054 1643 aa13.59□□□□□ -0.23
COL6A3-212ENST00000491769 SUPT7LO94864 414 aa13.59□□□□□ -0.23
COL6A3-212ENST00000491769 EME1Q96AY2 570 aa13.59□□□□□ -0.23
COL6A3-212ENST00000491769 FAM167BQ9BTA0 163 aa13.59□□□□□ -0.23
COL6A3-212ENST00000491769 E9PBE3 544 aa13.59□□□□□ -0.23
COL6A3-212ENST00000491769 GHRP10912 638 aa13.59□□□□□ -0.23
COL6A3-212ENST00000491769 MAPK1P28482 360 aa13.59□□□□□ -0.23
COL6A3-212ENST00000491769 ELAVL2Q12926 359 aaKnown RBP13.59□□□□□ -0.23
COL6A3-212ENST00000491769 AASDHQ4L235 1098 aaPredicted RBP13.59□□□□□ -0.23
COL6A3-212ENST00000491769 KIAA1324Q6UXG2 1013 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms