RNA–Protein interactions for RNA: ENST00000491433.1

CLCNKA-206, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 3

Gene CLCNKA, Length 824 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-206ENST00000491433 WNT6Q9Y6F9 365 aa11.99□□□□□ -0.49
CLCNKA-206ENST00000491433 HELZP42694 1942 aaKnown RBP11.99□□□□□ -0.49
CLCNKA-206ENST00000491433 CEP192Q8TEP8 1941 aa11.99□□□□□ -0.49
CLCNKA-206ENST00000491433 SCN1AP35498 2009 aa11.99□□□□□ -0.49
CLCNKA-206ENST00000491433 KPNA7A9QM74 516 aa11.98□□□□□ -0.49
CLCNKA-206ENST00000491433 K7EQS6 105 aa11.98□□□□□ -0.49
CLCNKA-206ENST00000491433 SLC9A3R1O14745 358 aaPredicted RBP11.98□□□□□ -0.49
CLCNKA-206ENST00000491433 NOL4O94818 638 aa11.98□□□□□ -0.49
CLCNKA-206ENST00000491433 CFIP05156 583 aa11.98□□□□□ -0.49
CLCNKA-206ENST00000491433 SERPINF2P08697 491 aa11.98□□□□□ -0.49
CLCNKA-206ENST00000491433 EIF2DP41214 584 aaKnown RBP11.98□□□□□ -0.49
CLCNKA-206ENST00000491433 SEC13P55735 322 aa11.98□□□□□ -0.49
CLCNKA-206ENST00000491433 DTHD1Q6ZMT9 781 aa11.98□□□□□ -0.49
CLCNKA-206ENST00000491433 LRRTM3Q86VH5 581 aa11.98□□□□□ -0.49
CLCNKA-206ENST00000491433 NT5DC4Q86YG4 428 aa11.98□□□□□ -0.49
CLCNKA-206ENST00000491433 EFCAB13Q8IY85 973 aa11.98□□□□□ -0.49
CLCNKA-206ENST00000491433 TTC16Q8NEE8 873 aa11.98□□□□□ -0.49
CLCNKA-206ENST00000491433 PIP4K2CQ8TBX8 421 aa11.98□□□□□ -0.49
CLCNKA-206ENST00000491433 PI4K2AQ9BTU6 479 aa11.98□□□□□ -0.49
CLCNKA-206ENST00000491433 CPSF3Q9UKF6 684 aaKnown RBP11.98□□□□□ -0.49
CLCNKA-206ENST00000491433 PILRBQ9UKJ0 227 aa11.98□□□□□ -0.49
CLCNKA-206ENST00000491433 ODF2LQ9ULJ1 636 aa11.98□□□□□ -0.49
CLCNKA-206ENST00000491433 CREBBPQ92793 2442 aa11.98□□□□□ -0.49
CLCNKA-206ENST00000491433 ANAPC1Q9H1A4 1944 aa11.98□□□□□ -0.49
CLCNKA-206ENST00000491433 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.97□□□□□ -0.49
CLCNKA-206ENST00000491433 A0A0B4J269 797 aa11.97□□□□□ -0.49
CLCNKA-206ENST00000491433 ZBTB24O43167 697 aaPredicted RBP11.97□□□□□ -0.49
CLCNKA-206ENST00000491433 FAM189A1O60320 539 aa11.97□□□□□ -0.49
CLCNKA-206ENST00000491433 JAK2O60674 1132 aa11.97□□□□□ -0.49
CLCNKA-206ENST00000491433 APODP05090 189 aa11.97□□□□□ -0.49
CLCNKA-206ENST00000491433 HDCP19113 662 aa11.97□□□□□ -0.49
CLCNKA-206ENST00000491433 OPRD1P41143 372 aa11.97□□□□□ -0.49
CLCNKA-206ENST00000491433 MYL7Q01449 175 aa11.97□□□□□ -0.49
CLCNKA-206ENST00000491433 GUCY1B3Q02153 619 aa11.97□□□□□ -0.49
CLCNKA-206ENST00000491433 RAD51AP2Q09MP3 1159 aa11.97□□□□□ -0.49
CLCNKA-206ENST00000491433 HYIQ5T013 277 aa11.97□□□□□ -0.49
CLCNKA-206ENST00000491433 WSCD1Q658N2 575 aa11.97□□□□□ -0.49
CLCNKA-206ENST00000491433 NAIF1Q69YI7 327 aaPredicted RBP11.97□□□□□ -0.49
CLCNKA-206ENST00000491433 SLFN12LQ6IEE8 588 aa11.97□□□□□ -0.49
CLCNKA-206ENST00000491433 NUDT18Q6ZVK8 323 aa11.97□□□□□ -0.49
CLCNKA-206ENST00000491433 TRMT11Q7Z4G4 463 aaKnown RBP11.97□□□□□ -0.49
CLCNKA-206ENST00000491433 TMEM86AQ8N2M4 240 aa11.97□□□□□ -0.49
CLCNKA-206ENST00000491433 PGBD3Q8N328 593 aa11.97□□□□□ -0.49
CLCNKA-206ENST00000491433 TMEM130Q8N3G9 435 aa11.97□□□□□ -0.49
CLCNKA-206ENST00000491433 CCDC33Q8N5R6 958 aa11.97□□□□□ -0.49
CLCNKA-206ENST00000491433 RIN3Q8TB24 985 aa11.97□□□□□ -0.49
CLCNKA-206ENST00000491433 SH3RF2Q8TEC5 729 aa11.97□□□□□ -0.49
CLCNKA-206ENST00000491433 FUBP3Q96I24 572 aaKnown RBP eCLIP11.97□□□□□ -0.49
CLCNKA-206ENST00000491433 CDK5RAP3Q96JB5 506 aa11.97□□□□□ -0.49
CLCNKA-206ENST00000491433 CEP295NLQ96MC4 621 aa11.97□□□□□ -0.49
CLCNKA-206ENST00000491433 PNKPQ96T60 521 aa11.97□□□□□ -0.49
CLCNKA-206ENST00000491433 ACBD6Q9BR61 282 aa11.97□□□□□ -0.49
CLCNKA-206ENST00000491433 GTPBP2Q9BX10 602 aaKnown RBP11.97□□□□□ -0.49
CLCNKA-206ENST00000491433 DPP3Q9NY33 737 aa11.97□□□□□ -0.49
CLCNKA-206ENST00000491433 EHD2Q9NZN4 543 aa11.97□□□□□ -0.49
CLCNKA-206ENST00000491433 ARHGAP26Q9UNA1 814 aa11.97□□□□□ -0.49
CLCNKA-206ENST00000491433 C2CD3Q4AC94 2353 aa11.97□□□□□ -0.49
CLCNKA-206ENST00000491433 PTPRQQ9UMZ3 2332 aa11.97□□□□□ -0.49
CLCNKA-206ENST00000491433 ADAMTS9Q9P2N4 1935 aa11.96□□□□□ -0.49
CLCNKA-206ENST00000491433 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.96□□□□□ -0.49
CLCNKA-206ENST00000491433 HUS1O60921 280 aa11.96□□□□□ -0.49
CLCNKA-206ENST00000491433 NFICP08651 508 aa11.96□□□□□ -0.49
CLCNKA-206ENST00000491433 PTGER3P43115 390 aa11.96□□□□□ -0.49
CLCNKA-206ENST00000491433 TNFRSF4P43489 277 aa11.96□□□□□ -0.49
CLCNKA-206ENST00000491433 CSRP3P50461 194 aa11.96□□□□□ -0.49
CLCNKA-206ENST00000491433 TRIP6Q15654 476 aaKnown RBP11.96□□□□□ -0.49
CLCNKA-206ENST00000491433 COLEC12Q5KU26 742 aa11.96□□□□□ -0.49
CLCNKA-206ENST00000491433 ARMCX6Q7L4S7 300 aa11.96□□□□□ -0.49
CLCNKA-206ENST00000491433 SPATA2LQ8IUW3 424 aaPredicted RBP11.96□□□□□ -0.49
CLCNKA-206ENST00000491433 ARL14EPQ8N8R7 260 aaPredicted RBP11.96□□□□□ -0.49
CLCNKA-206ENST00000491433 TXNDC5Q8NBS9 432 aaKnown RBP11.96□□□□□ -0.49
CLCNKA-206ENST00000491433 FBXO18Q8NFZ0 1043 aa11.96□□□□□ -0.49
CLCNKA-206ENST00000491433 KCNV2Q8TDN2 545 aa11.96□□□□□ -0.49
CLCNKA-206ENST00000491433 RLN3Q8WXF3 142 aa11.96□□□□□ -0.49
CLCNKA-206ENST00000491433 ADAMTS14Q8WXS8 1223 aa11.96□□□□□ -0.49
CLCNKA-206ENST00000491433 SNX21Q969T3 373 aa11.96□□□□□ -0.49
CLCNKA-206ENST00000491433 FNBP1Q96RU3 617 aa11.96□□□□□ -0.49
CLCNKA-206ENST00000491433 CYP2S1Q96SQ9 504 aa11.96□□□□□ -0.49
CLCNKA-206ENST00000491433 LLPHQ9BRT6 129 aaKnown RBP11.96□□□□□ -0.49
CLCNKA-206ENST00000491433 PRORYQ9H606 182 aa11.96□□□□□ -0.49
CLCNKA-206ENST00000491433 TMEM74BQ9NUR3 256 aa11.96□□□□□ -0.49
CLCNKA-206ENST00000491433 DNAAF2Q9NVR5 837 aaKnown RBP11.96□□□□□ -0.49
CLCNKA-206ENST00000491433 GCNT4Q9P109 453 aa11.96□□□□□ -0.49
CLCNKA-206ENST00000491433 APOBEC2Q9Y235 224 aaKnown RBP11.96□□□□□ -0.49
CLCNKA-206ENST00000491433 A0A0A0MRY4 1105 aa11.95□□□□□ -0.5
CLCNKA-206ENST00000491433 K7ENM7 598 aa11.95□□□□□ -0.5
CLCNKA-206ENST00000491433 ARHGAP33O14559 1287 aa11.95□□□□□ -0.5
CLCNKA-206ENST00000491433 SLC26A4O43511 780 aa11.95□□□□□ -0.5
CLCNKA-206ENST00000491433 TADA3O75528 432 aa11.95□□□□□ -0.5
CLCNKA-206ENST00000491433 IL18RAPO95256 599 aa11.95□□□□□ -0.5
CLCNKA-206ENST00000491433 KLF8O95600 359 aaPredicted RBP11.95□□□□□ -0.5
CLCNKA-206ENST00000491433 ADH1CP00326 375 aa11.95□□□□□ -0.5
CLCNKA-206ENST00000491433 PLA2G4BP0C869 781 aa11.95□□□□□ -0.5
CLCNKA-206ENST00000491433 ITPKAP23677 461 aa11.95□□□□□ -0.5
CLCNKA-206ENST00000491433 PCSK1P29120 753 aa11.95□□□□□ -0.5
CLCNKA-206ENST00000491433 PPP3CCP48454 512 aa11.95□□□□□ -0.5
CLCNKA-206ENST00000491433 LHX1P48742 406 aa11.95□□□□□ -0.5
CLCNKA-206ENST00000491433 SLC12A3P55017 1021 aa11.95□□□□□ -0.5
CLCNKA-206ENST00000491433 HMGN5P82970 282 aaKnown RBP11.95□□□□□ -0.5
CLCNKA-206ENST00000491433 RPL6Q02878 288 aaKnown RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms