RNA–Protein interactions for RNA: ENST00000491062.5

FXR1-220, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 2 BASIC

Gene FXR1, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-220ENST00000491062 PTPN4P29074 926 aa12.86□□□□□ -0.35
FXR1-220ENST00000491062 RNASELQ05823 741 aaKnown RBP12.86□□□□□ -0.35
FXR1-220ENST00000491062 EFTUD2Q15029 972 aaKnown RBP eCLIP12.86□□□□□ -0.359e-7■■■□□ 18.5
FXR1-220ENST00000491062 CTC1Q2NKJ3 1217 aa12.86□□□□□ -0.35
FXR1-220ENST00000491062 HP1BP3Q5SSJ5 553 aaPredicted RBP12.86□□□□□ -0.35
FXR1-220ENST00000491062 ANKRD22Q5VYY1 191 aa12.86□□□□□ -0.35
FXR1-220ENST00000491062 ZPBP2Q6X784 338 aa12.86□□□□□ -0.35
FXR1-220ENST00000491062 CAPN12Q6ZSI9 719 aa12.86□□□□□ -0.35
FXR1-220ENST00000491062 BANPQ8N9N5 519 aa12.86□□□□□ -0.35
FXR1-220ENST00000491062 FBXO41Q8TF61 875 aa12.86□□□□□ -0.35
FXR1-220ENST00000491062 DCAKDQ8WVC6 231 aa12.86□□□□□ -0.35
FXR1-220ENST00000491062 HAUS1Q96CS2 278 aa12.86□□□□□ -0.35
FXR1-220ENST00000491062 VPS11Q9H270 941 aa12.86□□□□□ -0.35
FXR1-220ENST00000491062 ZNF277Q9NRM2 450 aaPredicted RBP12.86□□□□□ -0.35
FXR1-220ENST00000491062 NKX1-2Q9UD57 310 aaPredicted RBP12.86□□□□□ -0.35
FXR1-220ENST00000491062 ZFP69BQ9UJL9 534 aa12.86□□□□□ -0.35
FXR1-220ENST00000491062 ADAMTS5Q9UNA0 930 aa12.86□□□□□ -0.35
FXR1-220ENST00000491062 BANF1O75531 89 aa12.85□□□□□ -0.35
FXR1-220ENST00000491062 SMNDC1O75940 238 aaKnown RBP eCLIP12.85□□□□□ -0.35
FXR1-220ENST00000491062 IFNB1P01574 187 aa12.85□□□□□ -0.35
FXR1-220ENST00000491062 KRT7P08729 469 aa12.85□□□□□ -0.35
FXR1-220ENST00000491062 TPBGLP0DKB5 382 aa12.85□□□□□ -0.35
FXR1-220ENST00000491062 ADRA1DP25100 572 aa12.85□□□□□ -0.35
FXR1-220ENST00000491062 RXRBP28702 533 aa12.85□□□□□ -0.35
FXR1-220ENST00000491062 ICAM3P32942 547 aa12.85□□□□□ -0.35
FXR1-220ENST00000491062 OTUD4Q01804 1114 aaKnown RBP12.85□□□□□ -0.35
FXR1-220ENST00000491062 SP4Q02446 784 aa12.85□□□□□ -0.35
FXR1-220ENST00000491062 CBLBQ13191 982 aa12.85□□□□□ -0.35
FXR1-220ENST00000491062 TNFAIP1Q13829 316 aa12.85□□□□□ -0.35
FXR1-220ENST00000491062 BLMHQ13867 455 aa12.85□□□□□ -0.35
FXR1-220ENST00000491062 TFDP1Q14186 410 aa12.85□□□□□ -0.35
FXR1-220ENST00000491062 MAPK6Q16659 721 aa12.85□□□□□ -0.35
FXR1-220ENST00000491062 FNBP1LQ5T0N5 605 aa12.85□□□□□ -0.35
FXR1-220ENST00000491062 CIAPIN1Q6FI81 312 aa12.85□□□□□ -0.35
FXR1-220ENST00000491062 SNRNP48Q6IEG0 339 aaKnown RBP12.85□□□□□ -0.35
FXR1-220ENST00000491062 GPAT2Q6NUI2 795 aa12.85□□□□□ -0.35
FXR1-220ENST00000491062 CLNKQ7Z7G1 428 aa12.85□□□□□ -0.35
FXR1-220ENST00000491062 LONP2Q86WA8 852 aa12.85□□□□□ -0.35
FXR1-220ENST00000491062 CHSY1Q86X52 802 aa12.85□□□□□ -0.35
FXR1-220ENST00000491062 ANKMY2Q8IV38 441 aa12.85□□□□□ -0.35
FXR1-220ENST00000491062 THNSL1Q8IYQ7 743 aa12.85□□□□□ -0.35
FXR1-220ENST00000491062 WDTC1Q8N5D0 677 aa12.85□□□□□ -0.35
FXR1-220ENST00000491062 ACTL9Q8TC94 416 aa12.85□□□□□ -0.35
FXR1-220ENST00000491062 PYROXD1Q8WU10 500 aa12.85□□□□□ -0.35
FXR1-220ENST00000491062 LRRN4Q8WUT4 740 aa12.85□□□□□ -0.35
FXR1-220ENST00000491062 TRIM6Q9C030 488 aaPredicted RBP12.85□□□□□ -0.35
FXR1-220ENST00000491062 ZNF302Q9NR11 478 aa12.85□□□□□ -0.35
FXR1-220ENST00000491062 CISHQ9NSE2 258 aa12.85□□□□□ -0.35
FXR1-220ENST00000491062 KANSL3Q9P2N6 904 aa12.85□□□□□ -0.35
FXR1-220ENST00000491062 ZNF214Q9UL59 606 aaPredicted RBP12.85□□□□□ -0.35
FXR1-220ENST00000491062 LRRC42Q9Y546 428 aa12.85□□□□□ -0.35
FXR1-220ENST00000491062 EP400Q96L91 3159 aa12.84□□□□□ -0.35
FXR1-220ENST00000491062 IGKV6D-21A0A0A0MT36 114 aa12.84□□□□□ -0.35
FXR1-220ENST00000491062 ADCY3O60266 1144 aa12.84□□□□□ -0.35
FXR1-220ENST00000491062 CBX6O95503 412 aa12.84□□□□□ -0.35
FXR1-220ENST00000491062 IL1BP01584 269 aa12.84□□□□□ -0.35
FXR1-220ENST00000491062 LMNAP02545 664 aaKnown RBP12.84□□□□□ -0.35
FXR1-220ENST00000491062 DHRS4L1P0CG22 281 aa12.84□□□□□ -0.35
FXR1-220ENST00000491062 GM2AP17900 193 aa12.84□□□□□ -0.35
FXR1-220ENST00000491062 EPHB2P29323 1055 aa12.84□□□□□ -0.35
FXR1-220ENST00000491062 RPL22P35268 128 aaKnown RBP12.84□□□□□ -0.35
FXR1-220ENST00000491062 KCNC4Q03721 635 aa12.84□□□□□ -0.35
FXR1-220ENST00000491062 TAF11Q15544 211 aa12.84□□□□□ -0.35
FXR1-220ENST00000491062 MSS51Q4VC12 460 aa12.84□□□□□ -0.35
FXR1-220ENST00000491062 TAF1BQ53T94 588 aaPredicted RBP12.84□□□□□ -0.35
FXR1-220ENST00000491062 ZNF449Q6P9G9 518 aa12.84□□□□□ -0.35
FXR1-220ENST00000491062 NIM1KQ8IY84 436 aa12.84□□□□□ -0.35
FXR1-220ENST00000491062 TEX9Q8N6V9 391 aa12.84□□□□□ -0.35
FXR1-220ENST00000491062 TTLL6Q8N841 843 aa12.84□□□□□ -0.35
FXR1-220ENST00000491062 SLC7A3Q8WY07 619 aa12.84□□□□□ -0.35
FXR1-220ENST00000491062 ACSF2Q96CM8 615 aaPredicted RBP12.84□□□□□ -0.35
FXR1-220ENST00000491062 C12orf42Q96LP6 360 aa12.84□□□□□ -0.35
FXR1-220ENST00000491062 MYOZ2Q9NPC6 264 aa12.84□□□□□ -0.35
FXR1-220ENST00000491062 CORO1CQ9ULV4 474 aaPredicted RBP12.84□□□□□ -0.35
FXR1-220ENST00000491062 ANK1P16157 1881 aa12.84□□□□□ -0.35
FXR1-220ENST00000491062 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.84□□□□□ -0.35
FXR1-220ENST00000491062 SIGLEC16A6NMB1 481 aa12.84□□□□□ -0.35
FXR1-220ENST00000491062 DNAJC6O75061 913 aa12.84□□□□□ -0.35
FXR1-220ENST00000491062 TMEM63AO94886 807 aa12.84□□□□□ -0.35
FXR1-220ENST00000491062 PSMA2P25787 234 aa12.84□□□□□ -0.35
FXR1-220ENST00000491062 SSTR1P30872 391 aa12.84□□□□□ -0.35
FXR1-220ENST00000491062 NEK3P51956 506 aa12.84□□□□□ -0.35
FXR1-220ENST00000491062 GDF10P55107 478 aa12.84□□□□□ -0.35
FXR1-220ENST00000491062 MYL6P60660 151 aa12.84□□□□□ -0.35
FXR1-220ENST00000491062 GAD2Q05329 585 aa12.84□□□□□ -0.35
FXR1-220ENST00000491062 CAPSQ13938 189 aa12.84□□□□□ -0.35
FXR1-220ENST00000491062 SURF1Q15526 300 aa12.84□□□□□ -0.35
FXR1-220ENST00000491062 TARBP2Q15633 366 aaKnown RBP12.84□□□□□ -0.35
FXR1-220ENST00000491062 SCARA3Q6AZY7 606 aa12.84□□□□□ -0.35
FXR1-220ENST00000491062 RHPN2Q8IUC4 686 aa12.84□□□□□ -0.35
FXR1-220ENST00000491062 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.84□□□□□ -0.35
FXR1-220ENST00000491062 FBXO36Q8NEA4 188 aa12.84□□□□□ -0.35
FXR1-220ENST00000491062 ZNF526Q8TF50 670 aaPredicted RBP12.84□□□□□ -0.35
FXR1-220ENST00000491062 TFAP2BQ92481 460 aa12.84□□□□□ -0.35
FXR1-220ENST00000491062 NAF1Q96HR8 494 aaKnown RBP12.84□□□□□ -0.35
FXR1-220ENST00000491062 TUBB6Q9BUF5 446 aa12.84□□□□□ -0.35
FXR1-220ENST00000491062 LHX5Q9H2C1 402 aa12.84□□□□□ -0.35
FXR1-220ENST00000491062 ACAD9Q9H845 621 aa12.84□□□□□ -0.35
FXR1-220ENST00000491062 NPHS2Q9NP85 383 aa12.84□□□□□ -0.35
FXR1-220ENST00000491062 AGTPBP1Q9UPW5 1226 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms