RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 GCLMP48507 274 aa8.1□□□□□ -1.11
CLDN1-202ENST00000490800 YARSP54577 528 aaKnown RBP8.1□□□□□ -1.11
CLDN1-202ENST00000490800 NTHL1P78549 312 aa8.1□□□□□ -1.11
CLDN1-202ENST00000490800 ZBED6P86452 979 aa8.1□□□□□ -1.11
CLDN1-202ENST00000490800 MYL7Q01449 175 aa8.1□□□□□ -1.11
CLDN1-202ENST00000490800 APBA1Q02410 837 aa8.1□□□□□ -1.11
CLDN1-202ENST00000490800 SOX4Q06945 474 aaPredicted RBP8.1□□□□□ -1.11
CLDN1-202ENST00000490800 NOLC1Q14978 699 aaKnown RBP eCLIP8.1□□□□□ -1.11
CLDN1-202ENST00000490800 PSMD6Q15008 389 aa8.1□□□□□ -1.11
CLDN1-202ENST00000490800 UPP1Q16831 310 aa8.1□□□□□ -1.11
CLDN1-202ENST00000490800 EXOC3L4Q17RC7 722 aa8.1□□□□□ -1.11
CLDN1-202ENST00000490800 ZNF568Q3ZCX4 644 aa8.1□□□□□ -1.11
CLDN1-202ENST00000490800 PKDCCQ504Y2 493 aa8.1□□□□□ -1.11
CLDN1-202ENST00000490800 SEZ6Q53EL9 994 aa8.1□□□□□ -1.11
CLDN1-202ENST00000490800 XKR4Q5GH76 650 aa8.1□□□□□ -1.11
CLDN1-202ENST00000490800 RSPO2Q6UXX9 243 aaPredicted RBP8.1□□□□□ -1.11
CLDN1-202ENST00000490800 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.1□□□□□ -1.11
CLDN1-202ENST00000490800 APBB1IPQ7Z5R6 666 aaPredicted RBP8.1□□□□□ -1.11
CLDN1-202ENST00000490800 GRASPQ7Z6J2 395 aaPredicted RBP8.1□□□□□ -1.11
CLDN1-202ENST00000490800 CNGA4Q8IV77 575 aa8.1□□□□□ -1.11
CLDN1-202ENST00000490800 BRSK2Q8IWQ3 736 aa8.1□□□□□ -1.11
CLDN1-202ENST00000490800 C3orf58Q8NDZ4 430 aa8.1□□□□□ -1.11
CLDN1-202ENST00000490800 NEK11Q8NG66 645 aa8.1□□□□□ -1.11
CLDN1-202ENST00000490800 CCDC127Q96BQ5 260 aa8.1□□□□□ -1.11
CLDN1-202ENST00000490800 UROC1Q96N76 676 aa8.1□□□□□ -1.11
CLDN1-202ENST00000490800 ZMAT2Q96NC0 199 aaKnown RBP8.1□□□□□ -1.11
CLDN1-202ENST00000490800 ACAP3Q96P50 834 aa8.1□□□□□ -1.11
CLDN1-202ENST00000490800 DNAJC7Q99615 494 aa8.1□□□□□ -1.11
CLDN1-202ENST00000490800 CCDC94Q9BW85 323 aaPredicted RBP8.1□□□□□ -1.11
CLDN1-202ENST00000490800 EDEM3Q9BZQ6 932 aa8.1□□□□□ -1.11
CLDN1-202ENST00000490800 SIX2Q9NPC8 291 aa8.1□□□□□ -1.11
CLDN1-202ENST00000490800 PLCB1Q9NQ66 1216 aa8.1□□□□□ -1.11
CLDN1-202ENST00000490800 TOPORSQ9NS56 1045 aaPredicted RBP8.1□□□□□ -1.11
CLDN1-202ENST00000490800 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.1□□□□□ -1.11
CLDN1-202ENST00000490800 GCNT4Q9P109 453 aa8.1□□□□□ -1.11
CLDN1-202ENST00000490800 EPS15L1Q9UBC2 864 aa8.1□□□□□ -1.11
CLDN1-202ENST00000490800 FBXW11Q9UKB1 542 aa8.1□□□□□ -1.11
CLDN1-202ENST00000490800 FBXL21Q9UKT6 434 aa8.1□□□□□ -1.11
CLDN1-202ENST00000490800 LUC7L2Q9Y383 392 aaKnown RBP8.1□□□□□ -1.11
CLDN1-202ENST00000490800 SOWAHDA6NJG2 315 aa8.09□□□□□ -1.11
CLDN1-202ENST00000490800 TMEM189-UBE2V1I3L0A0 370 aa8.09□□□□□ -1.11
CLDN1-202ENST00000490800 P4HA2O15460 535 aa8.09□□□□□ -1.11
CLDN1-202ENST00000490800 CCL16O15467 120 aa8.09□□□□□ -1.11
CLDN1-202ENST00000490800 MEFVO15553 781 aaPredicted RBP8.09□□□□□ -1.11
CLDN1-202ENST00000490800 SPINT1O43278 529 aa8.09□□□□□ -1.11
CLDN1-202ENST00000490800 TRAPPC3O43617 180 aa8.09□□□□□ -1.11
CLDN1-202ENST00000490800 STX10O60499 249 aa8.09□□□□□ -1.11
CLDN1-202ENST00000490800 C8AP07357 584 aa8.09□□□□□ -1.11
CLDN1-202ENST00000490800 DLATP10515 647 aaKnown RBP8.09□□□□□ -1.11
CLDN1-202ENST00000490800 MCF2P10911 925 aa8.09□□□□□ -1.11
CLDN1-202ENST00000490800 TKTP29401 623 aaKnown RBP8.09□□□□□ -1.11
CLDN1-202ENST00000490800 GTF2H1P32780 548 aa8.09□□□□□ -1.11
CLDN1-202ENST00000490800 TNFSF9P41273 254 aa8.09□□□□□ -1.11
CLDN1-202ENST00000490800 MXI1P50539 228 aa8.09□□□□□ -1.11
CLDN1-202ENST00000490800 CLCN5P51795 746 aa8.09□□□□□ -1.11
CLDN1-202ENST00000490800 RAB33AQ14088 237 aa8.09□□□□□ -1.11
CLDN1-202ENST00000490800 PPM1LQ5SGD2 360 aa8.09□□□□□ -1.11
CLDN1-202ENST00000490800 LIN9Q5TKA1 542 aa8.09□□□□□ -1.11
CLDN1-202ENST00000490800 KLHDC7AQ5VTJ3 777 aa8.09□□□□□ -1.11
CLDN1-202ENST00000490800 PDXDC1Q6P996 788 aa8.09□□□□□ -1.11
CLDN1-202ENST00000490800 GET4Q7L5D6 327 aaPredicted RBP8.09□□□□□ -1.11
CLDN1-202ENST00000490800 CCDC112Q8NEF3 446 aa8.09□□□□□ -1.11
CLDN1-202ENST00000490800 OR8K1Q8NGG5 319 aa8.09□□□□□ -1.11
CLDN1-202ENST00000490800 LMO3Q8TAP4 145 aa8.09□□□□□ -1.11
CLDN1-202ENST00000490800 KIAA1524Q8TCG1 905 aa8.09□□□□□ -1.11
CLDN1-202ENST00000490800 C18orf25Q96B23 403 aaPredicted RBP8.09□□□□□ -1.11
CLDN1-202ENST00000490800 FAM84AQ96KN4 292 aa8.09□□□□□ -1.11
CLDN1-202ENST00000490800 CGRRF1Q99675 332 aa8.09□□□□□ -1.11
CLDN1-202ENST00000490800 BAG1Q99933 345 aaPredicted RBP8.09□□□□□ -1.11
CLDN1-202ENST00000490800 RPP25Q9BUL9 199 aaKnown RBP8.09□□□□□ -1.11
CLDN1-202ENST00000490800 C2orf49Q9BVC5 232 aaPredicted RBP8.09□□□□□ -1.11
CLDN1-202ENST00000490800 INTS2Q9H0H0 1204 aaKnown RBP8.09□□□□□ -1.11
CLDN1-202ENST00000490800 IRF2BPLQ9H1B7 796 aa8.09□□□□□ -1.11
CLDN1-202ENST00000490800 TMEM8AQ9HCN3 771 aa8.09□□□□□ -1.11
CLDN1-202ENST00000490800 PDE11AQ9HCR9 933 aa8.09□□□□□ -1.11
CLDN1-202ENST00000490800 ABHD10Q9NUJ1 306 aa8.09□□□□□ -1.11
CLDN1-202ENST00000490800 RBAKQ9NYW8 714 aaPredicted RBP8.09□□□□□ -1.11
CLDN1-202ENST00000490800 CEP72Q9P209 647 aa8.09□□□□□ -1.11
CLDN1-202ENST00000490800 CPSF3Q9UKF6 684 aaKnown RBP8.09□□□□□ -1.11
CLDN1-202ENST00000490800 POLIQ9UNA4 740 aa8.09□□□□□ -1.11
CLDN1-202ENST00000490800 DUSP12Q9UNI6 340 aa8.09□□□□□ -1.11
CLDN1-202ENST00000490800 CDY1Q9Y6F8 540 aa8.09□□□□□ -1.11
CLDN1-202ENST00000490800 TDRD15B5MCY1 1934 aaKnown RBP8.09□□□□□ -1.11
CLDN1-202ENST00000490800 ZDBF2Q9HCK1 2354 aa8.08□□□□□ -1.12
CLDN1-202ENST00000490800 PTPRJQ12913 1337 aa8.08□□□□□ -1.12
CLDN1-202ENST00000490800 SERTM1A2A2V5 107 aa8.08□□□□□ -1.12
CLDN1-202ENST00000490800 KRBA1A5PL33 1030 aa8.08□□□□□ -1.12
CLDN1-202ENST00000490800 PODXLO00592 558 aa8.08□□□□□ -1.12
CLDN1-202ENST00000490800 GFRA3O60609 400 aa8.08□□□□□ -1.12
CLDN1-202ENST00000490800 C4BPAP04003 597 aaKnown RBP8.08□□□□□ -1.12
CLDN1-202ENST00000490800 CLTAP09496 248 aa8.08□□□□□ -1.12
CLDN1-202ENST00000490800 HNRNPA1P09651 372 aaKnown RBP eCLIP8.08□□□□□ -1.12
CLDN1-202ENST00000490800 UCHL3P15374 230 aa8.08□□□□□ -1.12
CLDN1-202ENST00000490800 KCNE1P15382 129 aa8.08□□□□□ -1.12
CLDN1-202ENST00000490800 AOC1P19801 751 aa8.08□□□□□ -1.12
CLDN1-202ENST00000490800 HNRNPH3P31942 346 aaKnown RBP8.08□□□□□ -1.12
CLDN1-202ENST00000490800 CTSOP43234 321 aaPredicted RBP8.08□□□□□ -1.12
CLDN1-202ENST00000490800 POLR2FP61218 127 aaKnown RBP8.08□□□□□ -1.12
CLDN1-202ENST00000490800 ENOX2Q16206 610 aaKnown RBP8.08□□□□□ -1.12
CLDN1-202ENST00000490800 MEA1Q16626 185 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms