RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 FAM83CQ9BQN1 747 aa33.39■■■□□ 2.94
LDB1-204ENST00000490751 TTLL2Q9BWV7 592 aa33.39■■■□□ 2.94
LDB1-204ENST00000490751 EHD2Q9NZN4 543 aa33.39■■■□□ 2.94
LDB1-204ENST00000490751 HELZP42694 1942 aaKnown RBP33.38■■■□□ 2.93
LDB1-204ENST00000490751 C2orf78A6NCI8 922 aa33.38■■■□□ 2.93
LDB1-204ENST00000490751 USP17L7P0C7H9 530 aa33.38■■■□□ 2.93
LDB1-204ENST00000490751 GCLMP48507 274 aa33.38■■■□□ 2.93
LDB1-204ENST00000490751 CSTF1Q05048 431 aaKnown RBP33.38■■■□□ 2.93
LDB1-204ENST00000490751 ITPRIPL2Q3MIP1 535 aa33.38■■■□□ 2.93
LDB1-204ENST00000490751 ZC3H14Q6PJT7 736 aaKnown RBP33.38■■■□□ 2.93
LDB1-204ENST00000490751 TNIP3Q96KP6 325 aa33.38■■■□□ 2.93
LDB1-204ENST00000490751 CHRNB1P11230 501 aa33.37■■■□□ 2.93
LDB1-204ENST00000490751 NOP14P78316 857 aaKnown RBP33.37■■■□□ 2.93
LDB1-204ENST00000490751 PPP3CAQ08209 521 aa33.37■■■□□ 2.93
LDB1-204ENST00000490751 EDRF1Q3B7T1 1238 aa33.37■■■□□ 2.93
LDB1-204ENST00000490751 ZNF528Q3MIS6 628 aa33.37■■■□□ 2.93
LDB1-204ENST00000490751 ARL14EPQ8N8R7 260 aaPredicted RBP33.37■■■□□ 2.93
LDB1-204ENST00000490751 MMRN2Q9H8L6 949 aa33.37■■■□□ 2.93
LDB1-204ENST00000490751 HPS4Q9NQG7 708 aa33.37■■■□□ 2.93
LDB1-204ENST00000490751 UTP3Q9NQZ2 479 aaKnown RBP eCLIP33.37■■■□□ 2.939e-19■■■□□ 18.6
LDB1-204ENST00000490751 TRPM5Q9NZQ8 1165 aa33.37■■■□□ 2.93
LDB1-204ENST00000490751 GCNT4Q9P109 453 aa33.37■■■□□ 2.93
LDB1-204ENST00000490751 ATP8B3O60423 1300 aa33.36■■■□□ 2.93
LDB1-204ENST00000490751 ENPEPQ07075 957 aa33.36■■■□□ 2.93
LDB1-204ENST00000490751 TRIM68Q6AZZ1 485 aa33.36■■■□□ 2.93
LDB1-204ENST00000490751 CC2D1AQ6P1N0 951 aaPredicted RBP33.36■■■□□ 2.93
LDB1-204ENST00000490751 ERCC4Q92889 916 aaPredicted RBP33.36■■■□□ 2.93
LDB1-204ENST00000490751 GSDMAQ96QA5 445 aa33.36■■■□□ 2.93
LDB1-204ENST00000490751 EBF3Q9H4W6 596 aa33.36■■■□□ 2.93
LDB1-204ENST00000490751 PRCPP42785 496 aa33.35■■■□□ 2.93
LDB1-204ENST00000490751 ASPAP45381 313 aa33.35■■■□□ 2.93
LDB1-204ENST00000490751 RUNX3Q13761 415 aa33.35■■■□□ 2.93
LDB1-204ENST00000490751 LRRC32Q14392 662 aa33.35■■■□□ 2.93
LDB1-204ENST00000490751 MTF1Q14872 753 aa33.35■■■□□ 2.93
LDB1-204ENST00000490751 ZNF658Q5TYW1 1059 aaPredicted RBP33.35■■■□□ 2.93
LDB1-204ENST00000490751 ACOT1Q86TX2 421 aa33.35■■■□□ 2.93
LDB1-204ENST00000490751 FAM35AQ86V20 835 aa33.35■■■□□ 2.93
LDB1-204ENST00000490751 TTC16Q8NEE8 873 aa33.35■■■□□ 2.93
LDB1-204ENST00000490751 TAS1R2Q8TE23 839 aa33.35■■■□□ 2.93
LDB1-204ENST00000490751 EEF2KMTQ96G04 330 aa33.35■■■□□ 2.93
LDB1-204ENST00000490751 IER2Q9BTL4 223 aa33.35■■■□□ 2.93
LDB1-204ENST00000490751 MED10Q9BTT4 135 aa33.35■■■□□ 2.93
LDB1-204ENST00000490751 IMPG2Q9BZV3 1241 aa33.35■■■□□ 2.93
LDB1-204ENST00000490751 SEMA4AQ9H3S1 761 aa33.35■■■□□ 2.93
LDB1-204ENST00000490751 PRMT8Q9NR22 394 aaPredicted RBP33.35■■■□□ 2.93
LDB1-204ENST00000490751 SMC2O95347 1197 aa33.34■■■□□ 2.93
LDB1-204ENST00000490751 NDST1P52848 882 aa33.34■■■□□ 2.93
LDB1-204ENST00000490751 USP4Q13107 963 aa33.34■■■□□ 2.93
LDB1-204ENST00000490751 ORC1Q13415 861 aa33.34■■■□□ 2.93
LDB1-204ENST00000490751 PON2Q15165 354 aa33.34■■■□□ 2.93
LDB1-204ENST00000490751 ZNF77Q15935 545 aa33.34■■■□□ 2.93
LDB1-204ENST00000490751 TSSK4Q6SA08 328 aa33.34■■■□□ 2.93
LDB1-204ENST00000490751 PAQR9Q6ZVX9 377 aa33.34■■■□□ 2.93
LDB1-204ENST00000490751 SMARCE1Q969G3 411 aa33.34■■■□□ 2.93
LDB1-204ENST00000490751 TIGD1Q96MW7 591 aa33.34■■■□□ 2.93
LDB1-204ENST00000490751 RBM12Q9NTZ6 932 aaKnown RBP33.34■■■□□ 2.93
LDB1-204ENST00000490751 HMGXB4Q9UGU5 601 aa33.34■■■□□ 2.93
LDB1-204ENST00000490751 PCDHA5Q9Y5H7 936 aa33.34■■■□□ 2.93
LDB1-204ENST00000490751 HDCP19113 662 aa33.33■■■□□ 2.93
LDB1-204ENST00000490751 IFRD2Q12894 506 aaPredicted RBP33.33■■■□□ 2.93
LDB1-204ENST00000490751 WDR44Q5JSH3 913 aa33.33■■■□□ 2.93
LDB1-204ENST00000490751 CETN3O15182 167 aa33.32■■■□□ 2.92
LDB1-204ENST00000490751 ARSAP15289 507 aa33.32■■■□□ 2.92
LDB1-204ENST00000490751 PDE6CP51160 858 aa33.32■■■□□ 2.92
LDB1-204ENST00000490751 TAF10Q12962 218 aa33.32■■■□□ 2.92
LDB1-204ENST00000490751 COBLL1Q53SF7 1204 aa33.32■■■□□ 2.92
LDB1-204ENST00000490751 NUP93Q8N1F7 819 aa33.32■■■□□ 2.92
LDB1-204ENST00000490751 SPATA20Q8TB22 786 aa33.32■■■□□ 2.92
LDB1-204ENST00000490751 KCNK16Q96T55 309 aa33.32■■■□□ 2.92
LDB1-204ENST00000490751 APOBEC3GQ9HC16 384 aaKnown RBP33.32■■■□□ 2.92
LDB1-204ENST00000490751 TMEM8AQ9HCN3 771 aa33.32■■■□□ 2.92
LDB1-204ENST00000490751 HOOK1Q9UJC3 728 aaKnown RBP33.32■■■□□ 2.92
LDB1-204ENST00000490751 ZNF840PA6NDX5 716 aa33.31■■■□□ 2.92
LDB1-204ENST00000490751 OTOL1A6NHN0 477 aaPredicted RBP33.31■■■□□ 2.92
LDB1-204ENST00000490751 LMNAP02545 664 aaKnown RBP33.31■■■□□ 2.92
LDB1-204ENST00000490751 EPB41P11171 864 aaKnown RBP33.31■■■□□ 2.92
LDB1-204ENST00000490751 PFKLP17858 780 aa33.31■■■□□ 2.92
LDB1-204ENST00000490751 PPP3CCP48454 512 aa33.31■■■□□ 2.92
LDB1-204ENST00000490751 GAS6Q14393 721 aa33.31■■■□□ 2.92
LDB1-204ENST00000490751 PDGFRLQ15198 375 aa33.31■■■□□ 2.92
LDB1-204ENST00000490751 MAMSTRQ6ZN01 415 aa33.31■■■□□ 2.92
LDB1-204ENST00000490751 UNC93AQ86WB7 457 aa33.31■■■□□ 2.92
LDB1-204ENST00000490751 FUKQ8N0W3 1084 aa33.31■■■□□ 2.92
LDB1-204ENST00000490751 SH3RF2Q8TEC5 729 aa33.31■■■□□ 2.92
LDB1-204ENST00000490751 SMARCD1Q96GM5 515 aa33.31■■■□□ 2.92
LDB1-204ENST00000490751 SLITRK1Q96PX8 696 aa33.31■■■□□ 2.92
LDB1-204ENST00000490751 DMAP1Q9NPF5 467 aaPredicted RBP33.31■■■□□ 2.92
LDB1-204ENST00000490751 ARHGAP26Q9UNA1 814 aa33.31■■■□□ 2.92
LDB1-204ENST00000490751 MYH10P35580 1976 aa33.3■■■□□ 2.92
LDB1-204ENST00000490751 CCDC130P13994 396 aa33.3■■■□□ 2.92
LDB1-204ENST00000490751 DGKKQ5KSL6 1271 aa33.3■■■□□ 2.92
LDB1-204ENST00000490751 CRYBG2Q8N1P7 616 aa33.3■■■□□ 2.92
LDB1-204ENST00000490751 OSCP1Q8WVF1 389 aa33.3■■■□□ 2.92
LDB1-204ENST00000490751 TSG101Q99816 390 aa33.3■■■□□ 2.92
LDB1-204ENST00000490751 KRT82Q9NSB4 513 aa33.3■■■□□ 2.92
LDB1-204ENST00000490751 AP1G2O75843 785 aa33.29■■■□□ 2.92
LDB1-204ENST00000490751 RTN3O95197 1032 aaPredicted RBP33.29■■■□□ 2.92
LDB1-204ENST00000490751 ABL1P00519 1130 aa33.29■■■□□ 2.92
LDB1-204ENST00000490751 YWHAQP27348 245 aa33.29■■■□□ 2.92
LDB1-204ENST00000490751 GTF2H1P32780 548 aa33.29■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms